KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:25:46 2014 Check: 00 .. Name: ENSP00000315064/1-307 Len: 316 Check: 4729 Weight: 1.00 Name: ENSBTAP00000025309/1-307 Len: 316 Check: 7694 Weight: 1.00 Name: ENSTTRP00000002088/1-266 Len: 316 Check: 46 Weight: 1.00 Name: bmy_10411T0/1-160 Len: 316 Check: 4478 Weight: 1.00 Name: BACU016561/1-160 Len: 316 Check: 4029 Weight: 1.00 // 1 50 ENSP00000315064/1-307 MLQTPESRGL PVPQAEGEKD GGHDGETRAP TASQ------ ---ERPKEEL ENSBTAP00000025309/1-307 MLQKPESGAL PISQAEREMD GSHDGETQAL TASQEMAPSP LLQERPEEDL ENSTTRP00000002088/1-266 ML-KPESGGL PIPRAEGEMD GGHDSETQAL TASQ------ ---ESLEEDL bmy_10411T0/1-160 MLQKPESGGL PIPQAEGEMD GGHDSETQAL TASQEVAPSP LXRESPEEDL BACU016561/1-160 MLQKPESGGL PILQAEGEMD GGHDSETQAL TASQEVAPSP LLRESPEEDL 51 100 ENSP00000315064/1-307 GAGREEGAAE PALTRKGARA LAAKALARRR AYRRLNRTVA ELVQFLLVKD ENSBTAP00000025309/1-307 GAVREEGATE PSLTPKGARA LAAKTLARRR ACRRLDRTVA ELVQFLLLKD ENSTTRP00000002088/1-266 GAVREEEAAE PSITLKGARA LAAKTLARRG ARLRLDRTVA ELVQFLLVKD bmy_10411T0/1-160 GAVREEGAAE PSITLKGARA LAAKTSARRR ACLRLDQTVT ELVQFLLVKD BACU016561/1-160 GAVREEGAAE PSITLKGARA LAAKTLARRR ACLRLDQTVT ELVQFLLVKD 101 150 ENSP00000315064/1-307 KKKSPITRSE MVKYVIGDLK ILFPDIIARA AEHLRYVFGF ELKQFDRKHH ENSBTAP00000025309/1-307 RKKSRITRSE MVKYVIGDLK DLFPEIIARA AEHLRYVFGF ELKQLDRKHH ENSTTRP00000002088/1-266 RKKSPITLSE MVKYIIRDLK DLFPEIIARA AEHLPYVFGF KLKQLDRKHH bmy_10411T0/1-160 RKKSPITLSE MVKYIIRDLK DLFPEIIARA AEHLRYVFGF KLKQLDRKHH BACU016561/1-160 RKKSPITLSE MVKYIIRDLK DLFPEIIARP AEHLRYVFGF KLKQLDRKHH 151 200 ENSP00000315064/1-307 TYILINKLKP LEEEEEEDLG GDGPRLGLLM MILGLIYMRG NSAREAQVWE ENSBTAP00000025309/1-307 TYILINKLKP IEDEEEA-LR GDGPRLGLLM MILGLIYMKG NSAREAQVWA ENSTTRP00000002088/1-266 TYVLTNKLKP LEEE-----G GDGPRLGLLM MMLGFIYMKG NSAREAQVWE bmy_10411T0/1-160 TYILISKLKP ---------- ---------- ---------- ---------- BACU016561/1-160 TYILISKLKP ---------- ---------- ---------- ---------- 201 250 ENSP00000315064/1-307 MLRRLGVQPS KYHFLFGYPK RLIMEDFVQQ RYLSYRRVPH TNPPEYEFSW ENSBTAP00000025309/1-307 MLRRLGVRPS KYHFLFGYPK RLIMEDFVQL RYLNYRRVPH TNPPECEFSW ENSTTRP00000002088/1-266 MLCRLEVRPS KYHPLFGCPR RLIMEDFVQL RYLNYRLVSH TNPPACEFS- bmy_10411T0/1-160 ---------- ---------- ---------- ---------- ---------- BACU016561/1-160 ---------- ---------- ---------- ---------- ---------- 251 300 ENSP00000315064/1-307 GPRSNLEISK MEVLGFVAKL HKKEPQHWPV QYREALADEA DRARAKARAE ENSBTAP00000025309/1-307 GPRSNLETSK MKVLGFVAKL HKKEPQHWPV QYREALADEA DRARAG---- ENSTTRP00000002088/1-266 DPRSDLKTS- -EVLGFVS-- LHKKNQHWPV QYREAL---- ---------- bmy_10411T0/1-160 ---------- ---------- ---------- ---------- ---------- BACU016561/1-160 ---------- ---------- ---------- ---------- ---------- 301 350 ENSP00000315064/1-307 ASMRARASAR AGIHLW ENSBTAP00000025309/1-307 ----ASVRAR SSTHLW ENSTTRP00000002088/1-266 ---------- ------ bmy_10411T0/1-160 ---------- ------ BACU016561/1-160 ---------- ------