KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:25:47 2014 Check: 00 .. Name: BACU004208/1-859 Len: 949 Check: 5599 Weight: 1.00 Name: ENSBTAP00000025316/1-844 Len: 949 Check: 6719 Weight: 1.00 Name: bmy_02486T0/1-807 Len: 949 Check: 4747 Weight: 1.00 Name: ENSTTRP00000001496/1-914 Len: 949 Check: 8891 Weight: 1.00 // 1 50 BACU004208/1-859 MSTKVSKCKE QARVTFPAPE EEEEGEDEGA EPQRRRRGWR GVNGGLEPX- ENSBTAP00000025316/1-844 ---------- ---------- ---------- ---------- ---------- bmy_02486T0/1-807 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001496/1-914 MSTKVSKCKE QARV-FPAPE EEEEGEDEGA EPQRRRRGWR GVNGGLEPRL 51 100 BACU004208/1-859 XPWQREPHDY CLPPFPPGPD MSMEESPSLR RKTVMREKGR RQAVRGPAFM ENSBTAP00000025316/1-844 ---------- ---------- --MEESPSLR RKTVMREKGR RQAVRGPAFM bmy_02486T0/1-807 ---------- ---------- --MEESPSLR RKTVMREKGR RQAVRGPAFM ENSTTRP00000001496/1-914 APLQREPHD- ----FPPGPD MSMEESPSLR RKTVMREKGR RQAVRGPAFM 101 150 BACU004208/1-859 FNDRGTSLTA EEERFLDAAE YGNIPVVRKM LEESRTLNVN CVDYMGQNAL ENSBTAP00000025316/1-844 FNDRGTSLTA EEERFLDAAE YGNIPVVRKM LEESKTLNVN CVDYMGQNAL bmy_02486T0/1-807 FNDRGTSLTA EEERFLDAAE YGNIPVVRKM LEESRTLNVN CVDYMGQNAL ENSTTRP00000001496/1-914 FNDRGTSLTA EEERFLDAAE YGNIPVVRKM LEESRTLNVN CVDYMGQNAL 151 200 BACU004208/1-859 QLAVGNEHLE VTELLLKKEN LARIGDALLL AISKGYVRIV EAILNHPGFA ENSBTAP00000025316/1-844 QLAVGNEHLE VTELLLKKEN LARIGDALLL AISKGYVRIV EAILNHPGFA bmy_02486T0/1-807 QLAVGNEHLE VTELLLKKEN LARIGDALLL AISKGYVRIV EAILNHPGFA ENSTTRP00000001496/1-914 QLAVGNEHLE VTELLLKKEN LARIGDALLL AISKGYVRIV EAILNHPGFA 201 250 BACU004208/1-859 ASKRLTLSPC EQELQDDDFY AYDEDGTRFS PDITPIILAA HCQKYEVVHM ENSBTAP00000025316/1-844 ASKRLTLSPC EQELQDDDFY AYDEDGTRFS PDITPIILAA HCQKYEVVHM bmy_02486T0/1-807 ASKRLTLSPC EQELQDDDFY AYDEDGTRFS PDITPIILAA HCQKYEVVHM ENSTTRP00000001496/1-914 ASKRLTLSPC EQELQDDDFY AYDEDGTRFS PDITPIILAA HCQKYEVVHM 251 300 BACU004208/1-859 LLMKGARIER PHDYFCKCGD CTEKQRHDSF SHSRSRINAY KGLASPAYLS ENSBTAP00000025316/1-844 LLMKGARIER PHDYFCKCGD CTEKQRHDSF SHSRSRINAY KGLASPAYLS bmy_02486T0/1-807 LLMKGARIER PHDYFCKCGD CTEKQRHDSF SHSRSRINAY KGLASPAYLS ENSTTRP00000001496/1-914 LLMKGARIER PHDYFCKCGD CTEKQRHDSF SHSRSRINAY KGLASPAYLS 301 350 BACU004208/1-859 LSSEDPVLTA LELSNELAKL ANIEKEFKND YRKLSMQCKD FVVGVLDLCR ENSBTAP00000025316/1-844 LSSEDPVLTA LELSNELAKL ANIEKEFKND YRKLSMQCKD FVVGVLDLCR bmy_02486T0/1-807 LSSEDPVLTA LELSNELAKL ANIEKEFKND YRKLSMQCKD FVVGVLDLCR ENSTTRP00000001496/1-914 LSSEDPVLTA LELSNELAKL ANIEKEFKND YRKLSMQCKD FVVGVLDLCR 351 400 BACU004208/1-859 DSEEVEAILN GDLESAEPLE MHRHKASLSR VKLAIKYEVK K--------- ENSBTAP00000025316/1-844 DSEEVEAILN GDLESADPLE MHRHKASLSR VKLAIKYEVK K--------- bmy_02486T0/1-807 DSEEVEAILN GDLESAEPLE MHRHKASLSR VKLAIKYEVK KDAHAFGSRT ENSTTRP00000001496/1-914 DSEEVEAILN GDLESAEPLE MHRHKASLSR VKLAIKYEVK K--------- 401 450 BACU004208/1-859 ---------- ---------- FVAHPNCQQQ LLTIWYEDLS GLREQTVAVK ENSBTAP00000025316/1-844 ---------- ---------- FVAHPNCQQQ LLTIWYENLS GLREQTVAIK bmy_02486T0/1-807 VDNGMVTYFS FSLSLCPDQQ FVAHPNCQQQ LLTIWYENLS GLREQTVAIK ENSTTRP00000001496/1-914 ---------- ---------- FVAHPNCQQQ LLTIWYENLS GLREQTVAIK 451 500 BACU004208/1-859 CLVVLVVALG LPFLAIGYWI APCSRLGKIL RSPFMKFVAH AASFIIFLGL ENSBTAP00000025316/1-844 CLVVLVVALG LPFLAIGYWI APCSRLGKVL RSPFMKFVAH AASFIIFLGL bmy_02486T0/1-807 CLVVLVVALG LPFLAIGYWI APCSRLGKIL RSPFMKFVAH AASFIIFLGL ENSTTRP00000001496/1-914 CLVVLVVALG LPFLAIGYWI APCSRLGKIL RSPFMKFVAH AASFIIFLCL 501 550 BACU004208/1-859 LVFNASDRFE GITTLPNITV TDYPRQIFRV KTTRFTWTEM LIMVWVLGMM ENSBTAP00000025316/1-844 LVFNASDRFE GITTLPNITV IDYPKQIFRV KTTQFTWTEM LIMVWVLGMM bmy_02486T0/1-807 LVFNASDRFE GITTLPNITV TDYPRQIFRV KTTRFTWTEM LIMVWVLGMM ENSTTRP00000001496/1-914 LVFNASDRFE GITTLPNITV IDYPKQIFRV KTTQFTWTEM LIMVWVLGMM 551 600 BACU004208/1-859 WSECKELWLE GPREYILQLW NVLDFGMLSI FIAAFTARFL AFLQATKAQQ ENSBTAP00000025316/1-844 WSECKELWLE GPREYILQLW NVLDFGMLSI FIAAFTARFL AFLQATKAQQ bmy_02486T0/1-807 WSECKELWLE GPREYILQLW NVLDFGMLSI FIAAFTARFL AFLQATKAQQ ENSTTRP00000001496/1-914 WSECKELWLE GPREYILQLW NVLDFGMLSI FIAAFTARFL AFLQATKAQH 601 650 BACU004208/1-859 YVDSYVQESD LSEVTLPPEI QYFTYGEEIR RSSVPPFVPS V--------- ENSBTAP00000025316/1-844 YVDSYVQESD LSEVTLPPEI QYFTYARDKW LPSDPQIISE GLYAIAVVLS bmy_02486T0/1-807 YVDSYVQESD LSEVTLPPEI QYFTYARDKW LPSDPQIISE GLYAIAVVLS ENSTTRP00000001496/1-914 YVDSYVQESD LSEVTLPPEI QYFTYARDKW LPSDPQIISE GLYAIAVVLS 651 700 BACU004208/1-859 --------PC NA-------- ---TAENKLD L--------- ---------- ENSBTAP00000025316/1-844 FSRIAYILPA NESFGPLQIS LGRTVKDIFK FMVLFIMVFL AFMIGMFILY bmy_02486T0/1-807 FSRIAYILPA NESFGPLQIS LGRTVKDIFK FMVLFIMVFL AFMIGMFILY ENSTTRP00000001496/1-914 FSRIAYILPA NESFGPLQIS LGRTVKDIFK FMVLFIMVFL AFMIGMFILY 701 750 BACU004208/1-859 ---------- ---HVEESFK TLFWSIFGLS EVTSVVLKYD HKFIENIGYV ENSBTAP00000025316/1-844 SYYLGAKVNA AFTTVEESFK TLFWSIFGLS EVTSVVLKYD HKFIENIGYV bmy_02486T0/1-807 SYYLGAKVNA AFTTVEESFK TLFWSIFGLS EVTSVVLKYD HKFIENIGYV ENSTTRP00000001496/1-914 SYYLGAKVNA AFTTVEESFK TLFWSIFGLS EVTSVVLKYD HKFIENIGYV 751 800 BACU004208/1-859 LYGIYNVTMV VVLLNMLIAM INSSYQEIED DSDVEWKFAR SKLWLSYFDD ENSBTAP00000025316/1-844 LYGIYNVTMV VVLLNMLIAM INSSYQEIED DSDVEWKFAR SKLWLSYFDD bmy_02486T0/1-807 LYGIYNVTMV VVLLNMLIAM INSSYQEIE- ---------- ---------- ENSTTRP00000001496/1-914 LYGIYNVTMV VVLLNMLIAM INSSYQEIED DSDVEWKFAR SKLWLSYFDD 801 850 BACU004208/1-859 GKTLPPPFSL VPSPKSFVYF IMRIINFSKC RRRRLQKDIE MGMGNSKSRL ENSBTAP00000025316/1-844 GKTLPPPFSL VPSPKSFVYF IMRIINFSKC RRRRLQKDIE MGIGNSKSRL bmy_02486T0/1-807 ---------- ---------- ---------- ---------- ---------L ENSTTRP00000001496/1-914 GKTLPPPFSL VPSPKSFVYF IMRIINFSRC RRRRLQKDIE MGMGNSKSRL 851 900 BACU004208/1-859 NLFTQSNSRV FESHSFNSIL NQPTRYQQIM KRLIKRYVLK AQVDKENDEV ENSBTAP00000025316/1-844 NLFTQSNSRV FESHSFNSIL NQPTRYQQIM KRLIKRYVLK AQVDKENDEV bmy_02486T0/1-807 NLFTQSNSRV FESHSFNSIL NQPTRYQQIM KRLIKRYVLK AQVDKENDEV ENSTTRP00000001496/1-914 NLFTQSNSRV FESHSFNSIL NPPTRYQQIM KRLIKRYVLK AQVDKENDEV 901 950 BACU004208/1-859 NEGELKEIKQ DISSLRYELL EDKSQATEEL AILIHKLSEK LNPSVLRCE ENSBTAP00000025316/1-844 NEGELKEIKQ DISSLRYELL EDKSQATEEL AILIHKLSEK LSPAC---- bmy_02486T0/1-807 NEGELKEIKQ DISSLRYELL EDKSQATEEL AILIHKLSEK LNPSVLRCE ENSTTRP00000001496/1-914 NEGELKEIKQ DISSLRYELL EDKSQATEEL AILIHKLSEK LNPSVLRCE