KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:25:47 2014 Check: 00 .. Name: ENSTTRP00000010267/1-359 Len: 546 Check: 8400 Weight: 1.00 Name: ENSBTAP00000025318/1-359 Len: 546 Check: 6883 Weight: 1.00 Name: ENSP00000210444/1-359 Len: 546 Check: 7299 Weight: 1.00 Name: BACU017566/1-546 Len: 546 Check: 489 Weight: 1.00 Name: bmy_01807T0/1-243 Len: 546 Check: 6568 Weight: 1.00 // 1 50 ENSTTRP00000010267/1-359 ---------- ---------- ---------- ---------- ------MPLE ENSBTAP00000025318/1-359 ---------- ---------- ---------- ---------- ------MPLE ENSP00000210444/1-359 ---------- ---------- ---------- ---------- ------MPLE BACU017566/1-546 VRELVLDNCK SNDGKIEGLT AEFVNLEFLS LINVGLISVS NLPKLPKLKK bmy_01807T0/1-243 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000010267/1-359 LELCPGRWVG G------QHP CFIIAEIGQN ---------- ---------- ENSBTAP00000025318/1-359 LELCPGRWVG G------HHP CFIIAEIGQN ---------- ---------- ENSP00000210444/1-359 LELCPGRWVG G------QHP CFIIAEIGQN ---------- ---------- BACU017566/1-546 LELSDNRIFG GLDMLAEKLP NLTHLNLSGN KLKDISTLEP LKKLECLKSL bmy_01807T0/1-243 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000010267/1-359 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025318/1-359 ---------- ---------- ---------- ---------- ---------- ENSP00000210444/1-359 ---------- ---------- ---------- ---------- ---------- BACU017566/1-546 DLFNCEVTNL NDYRESVFKL LPQLTYLDGY DREDREAPDS DAEVDGVDEE bmy_01807T0/1-243 ---------- ---------- ---------- ---------- ---------- 151 200 ENSTTRP00000010267/1-359 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025318/1-359 ---------- ---------- ---------- ---------- ---------- ENSP00000210444/1-359 ---------- ---------- ---------- ---------- ---------- BACU017566/1-546 EDDEEGEDED KEEDEDGEEE EFDDEEDEDE DEDVEGEEDE DEVSGEEEEF bmy_01807T0/1-243 ---------- ---------- ---------- ---------- ---------- 201 250 ENSTTRP00000010267/1-359 -HQGDLDV-- ---------- --AKRMIRMA KECGADCAKF QKSELEYKFN ENSBTAP00000025318/1-359 -HQGDLDV-- ---------- --AKRMIRMA KECGADCAKF QKSELEYKFN ENSP00000210444/1-359 -HQGDLDV-- ---------- --AKRMIRMA KECGADCAKF QKSELEFKFN BACU017566/1-546 GHDGEVDDDE DDEDEDEDED EGGDKLFNFL RECGADCAKF QKSELEYKFN bmy_01807T0/1-243 ---------- ---------- ---------- ---------- ---------- 251 300 ENSTTRP00000010267/1-359 RKALERPYTS KHSWGKTYGE HKRHLEFSHA QYKELQKYAE EVGIFFTASG ENSBTAP00000025318/1-359 RKALERPYTS KHSWGKTYGE HKRHLEFSHA QYKELQKYAE EVGIFFTASG ENSP00000210444/1-359 RKALERPYTS KHSWGKTYGE HKRHLEFSHD QYRELQRYAE EVGIFFTASG BACU017566/1-546 RKALERPYTS KHSWGKTYGE HKRHLEFSHA QYKELQKYAE EVGIFFTASG bmy_01807T0/1-243 ---------- ---------- ---------- ---------- ---------- 301 350 ENSTTRP00000010267/1-359 MDEMAVEFLH ELNVPFFKVG SGDTNNFPYL EKTARKGRPM VISSGMQSMD ENSBTAP00000025318/1-359 MDEMAVEFLH ELNVPFFKVG SGDTNNFPYL EKTAKKGRPM VISSGMQSMD ENSP00000210444/1-359 MDEMAVEFLH ELNVPFFKVG SGDTNNFPYL EKTAKKGRPM VISSGMQSMD BACU017566/1-546 MDEMAVEFLH ELNVPFFKVG SGDTNNFPYL EKTAKKGRPM VISSGMQSMD bmy_01807T0/1-243 ---MAVEFLH ELNVPFFKVG SGDTNNFPYL EKTAKKGRPM VISSGMQSMD 351 400 ENSTTRP00000010267/1-359 TMKQVYQIVK PLNPNFCFLQ CTSAYPLQPE DVNLCVISEY QKLFPDIPIG ENSBTAP00000025318/1-359 TMKQVYQIVK ALNPNFCFLQ CTSAYPLQPE DVNLRVISEY QKLFPDIPIG ENSP00000210444/1-359 TMKQVYQIVK PLNPNFCFLQ CTSAYPLQPE DVNLRVISEY QKLFPDIPIG BACU017566/1-546 TMKQVYQIVK PLNPNFCFLQ CTSAYPLQPE DVNLRVISEY QKLFPDIPIG bmy_01807T0/1-243 TMKQVYQIVK PLNPNFCFLQ CTSAYPLQPE DVNLRVISEY QKLFPDIPIG 401 450 ENSTTRP00000010267/1-359 YSGHETGIVI SEASVALGAK VLERHITLDK TWKGSDHSAS LEPVELAELV ENSBTAP00000025318/1-359 YSGHETGIAI SVAAVALGAK VLERHITLDK TWKGSDHSAS LEPGELAELV ENSP00000210444/1-359 YSGHETGIAI SVAAVALGAK VLERHITLDK TWKGSDHSAS LEPGELAELV BACU017566/1-546 YSGHETGIVI SVAAVALGAK VLERHITLDK TWKGSDHSAS LEPGELAELV bmy_01807T0/1-243 YSGHETGIAI SVAAVALGAK VLERHITLDK TWKGSDHSAS LEPGELAELV 451 500 ENSTTRP00000010267/1-359 RSVRLVERAL GSPTKQLLPC EMACNEKLGK SVVAKVKIPE GTILTLDMLT ENSBTAP00000025318/1-359 RSVRLVERAL GSPTKQLLPC EMACNEKLGK SVVAKVRIPE GSILTLDMLT ENSP00000210444/1-359 RSVRLVERAL GSPTKQLLPC EMACNEKLGK SVVAKVKIPE GTILTMDMLT BACU017566/1-546 RSVRLVERAL GSPTKQLLPC EMACNEKLGK SVVAKVKIPE GTILTLDMLT bmy_01807T0/1-243 RSVRLVERAL GSPTKQLLPC EMACNEKLGK SVVAKVKIPE GTILTLDMLT 501 550 ENSTTRP00000010267/1-359 VKVGEPKGYP PEDIFSLVGK KVLVTVEEDD TIMEESVENH GKKIKS ENSBTAP00000025318/1-359 VKVGEPKGYP PEDIFSLVGK KVLVTVEEDD TIMEELVENH GKKIRS ENSP00000210444/1-359 VKVGEPKGYP PEDIFNLVGK KVLVTVEEDD TIMEELVDNH GKKIKS BACU017566/1-546 VKVGEPKGYP PEDIFNLVGK KVLVTVEEDD TIMEESVENH GKKIKS bmy_01807T0/1-243 VKVGEPKGYP PEDIFNLVGK KVLVTVEEDD TIMEESVENH GKKIKS