KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:25:51 2014 Check: 00 .. Name: ENSP00000392660/1-570 Len: 765 Check: 3052 Weight: 1.00 Name: ENSBTAP00000025337/1-704 Len: 765 Check: 6801 Weight: 1.00 Name: BACU017046/1-664 Len: 765 Check: 622 Weight: 1.00 Name: bmy_01645T0/1-599 Len: 765 Check: 133 Weight: 1.00 Name: ENSTTRP00000001341/1-635 Len: 765 Check: 9138 Weight: 1.00 // 1 50 ENSP00000392660/1-570 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025337/1-704 TQCKPRTASS QFSFLRKSIP RCRRINRMLS NESLQSPAFS RSNSQASVDS BACU017046/1-664 ---------- ---------- -------MLS NESLQSPAFS RSNSQASIDS bmy_01645T0/1-599 ---------- ---------- -------MLS NESLQSPAFS RSNSQASIDS ENSTTRP00000001341/1-635 ---------- ------KSIS RCRRISRMLS NESLQSPAFS RSNSQASIDS 51 100 ENSP00000392660/1-570 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025337/1-704 ASMENFWREI ESIKETSLGA QEEQTPAEAK PLDEGELEAE WLQDVGLSTL BACU017046/1-664 ASMEDFWREI ESIKENSLGV QEEQTPAEAK PLDEGELEAE WLQDVGLSTL bmy_01645T0/1-599 ASMEDFWREI ESIKENSLGV QEEQTPAEAK PLDEGELEAE WLQDVGLSTL ENSTTRP00000001341/1-635 ASMEDFWREI ESIKENSLGV QEEQTPAEAK PLDEGELEAE WLQDVGLSTL 101 150 ENSP00000392660/1-570 ---------- ---------- ---------- ----MRKKDK QSIRDVRDIF ENSBTAP00000025337/1-704 ISGDEEEDGK ALLSTLTRTQ AAAVKKRYNT YTQTLRKKNK QSVRDVRDIF BACU017046/1-664 ISGDEEEDGK ALLSTLTRTQ AAAVKKRYNT YTQTMRKKNK QSVRDVRDIF bmy_01645T0/1-599 ISGDEEEDGK ALLSTLTRTQ AAAVKKRYNT YTQTMRKKNK QSVRDVRDIF ENSTTRP00000001341/1-635 ISGDEEEGGK ALLSTLTRTQ AAAVKKRYNT YTQTMRKKNK QSIRDVRDIF 151 200 ENSP00000392660/1-570 GVSESP---- ---------- ---------- ---------- ---------- ENSBTAP00000025337/1-704 GTSESP---- ---------- ---------- ---------- ---------- BACU017046/1-664 GVSESP---- CCIEIIASLM QQIIIGYILC AILISGSMRI GFLELRGNSY bmy_01645T0/1-599 GVSESPPDDF CCIP------ ---------- ---------- APLLDVNPDE ENSTTRP00000001341/1-635 GVSESP---- ---------- ---------- ---------- ---------- 201 250 ENSP00000392660/1-570 ---------- ---PRDTCGN HTNQLDGTKE ERELPRVIKT SGSMPDDASL ENSBTAP00000025337/1-704 ---------- ---PGDTCDS HASELDGARE GKALPGIIKA SGPLPDGASL BACU017046/1-664 IGKGELDILL QSQSGDTRDN HPSQLDGTQG EKELPGVIKT SGSLPDDASF bmy_01645T0/1-599 EGMPAVPCRN GQLPGDTCDN HPSQLDGTQE EKELPGVIKT SGSLPDDASF ENSTTRP00000001341/1-635 ---------- ---PGDTCDN HPSQLDDTQE EKELPGVIKT SGSLPDDASF 251 300 ENSP00000392660/1-570 NSTTLSDASQ DKEGSFAVPR SDSVAILETI PVLPVHSNGS PEPGQPVQNA ENSBTAP00000025337/1-704 NSSTLSDGSQ DEEWSFTVPR SGSMSILEAI PDVPVHSNVA ADPGRSARNA BACU017046/1-664 NITTLSDGSQ DEEGSFAVPR SGSMSILETI PDVPAHSNGS ADPGQSVQNA bmy_01645T0/1-599 NITTLSDGSQ DEEGSFAVPR SGSMSILETI PDVPAHSNGS ADPGQSVQNA ENSTTRP00000001341/1-635 NITTLSDGSQ DEEGSFAVPR SGSMSILETI PDVPAHSNGS ADPGQSVQNA 301 350 ENSP00000392660/1-570 ISDDDFLEKN IPPEAEELSF EVSYSEMVTE ALKRNKLKKS EIKKEDYVLT ENSBTAP00000025337/1-704 ASDDEYLEKN IPVEAEELSF EVSYSEKLTQ APKRNRFKKL DFKKEDYVLP BACU017046/1-664 VSDDEYLEKD IPLQAEELSF EVSYSEMVTE APKRNKFKKS DFKKEDYVLP bmy_01645T0/1-599 VSDDEYLEKD IPLQAEELSF EVSYSEMVTE APKRNKFKKS DFKKEDYVLP ENSTTRP00000001341/1-635 VSDDEYLEKD IPLQAEELSF EESYSEMVTE APKRNKLKKS DFKKEDYVLP 351 400 ENSP00000392660/1-570 KFNVQKTRFG LTEAGDLSAE DMKKIRHLSL IELTAFFDAF GIQLKRNKTE ENSBTAP00000025337/1-704 KFVVQKTRFG LTKAEDLSAE DMKKIRHLSL IELTAFFDAF RIQLKRNKTE BACU017046/1-664 KFIVQKTRLG LTEAGDLSAE DMKKIRHLSL IELTAFFDAF RIQLKRNKTE bmy_01645T0/1-599 KFIVQKTRFG LTEAGDLSAE DMKKIRHLSL IELTAFFDAF RIQLKRNKTE ENSTTRP00000001341/1-635 KFIVQKTRFG LTEAGDLSAD DMKKIRHLSL IELTAFFDAF RIQLKRNKTE 401 450 ENSP00000392660/1-570 KVKGRDNGIF GVPLTVLLDG DRKKDPGVKV PLVLQKFFEK VEESGLESEG ENSBTAP00000025337/1-704 KVKGRDSGIF GVPLTVLLEN DRRKDSGVKV PLVLQKFFEK VEESGLESEG BACU017046/1-664 KVKGRDSGIF GVPLTVLLEN DRRKDAGVKV PLVLQKFFQK VEESGLESEG bmy_01645T0/1-599 KVKGRDSGIF GVPLTVLLEN DRRKDAGVKV PLVLQKFFQK VEESGLESEG ENSTTRP00000001341/1-635 KVKGRDSGIF GVPLTVLLEN DRRKDAGVKV PLVLQKFFQK VEESGLESEG 451 500 ENSP00000392660/1-570 IFRLSGCTAK VKQYREELDA KFNADKFKWD KMCHREAAVM LKAFFRELPT ENSBTAP00000025337/1-704 IFRLSGCTAK VKQYREELDA KFNADKFKWE KMCHREAAVM LKAFFRELPT BACU017046/1-664 IFRLSGCTAK VKQYREELDA KFNADKFKWE KMCHREAAVM LKAFFRELPT bmy_01645T0/1-599 IFRLSGCTAK VKQYREELDA KFNADKFKWE KMCHREAAVM LKAFFRELPT ENSTTRP00000001341/1-635 IFRLSGCTAK VKQYREELDA KFNADKFKWE KMCHREAAVM LKAFFRELPT 501 550 ENSP00000392660/1-570 SLFPVEYIPA FISLMERGPH VKVQFQALHL MVMALPDANR DAAQALMTFF ENSBTAP00000025337/1-704 SLFPVEYIPA FITLMERGPH IRVQFQALHL MVMALPDANR DTAQALMTFF BACU017046/1-664 SLFPVEYIPA FITLMEGGPH IKVQFQALHL MIMALPEANR DTAQALMTFF bmy_01645T0/1-599 SLFPVEYVPA FITLMERGPH IKVQFQALHL MIMALPEANR DTAQALMTFF ENSTTRP00000001341/1-635 SLFPVEYIPA FITLMERGPH IKVQFQALHL MIMALPEANR DTAQALMTFF 551 600 ENSP00000392660/1-570 NKVIANESKN RMSLWNISTV MAPNLFFSRS KHSDYEELLL ANTAAHIIRL ENSBTAP00000025337/1-704 NKVIANESKN RMSIWNISTV MAPNLFFSRS KHSDCEELLL ANTAAHIIRL BACU017046/1-664 NKVIANESKN RMSIWNISTI MAPNLFFSRS KHSDCEELLL ANTAAHIIRL bmy_01645T0/1-599 NKVIANESKN RMSIWNISTI MAPNLFFSRS KHSDCEELLL ANTAAHIIRL ENSTTRP00000001341/1-635 NKVIANESKN RMSIWNISTI MAPNLFFSRS KHSDCEELLL ANTAAHIIRL 601 650 ENSP00000392660/1-570 MLKYQKILWK VPSFLITQVR RMNEATMLLK KQLPSVRKLL RRKTLERETA ENSBTAP00000025337/1-704 MLKYQEMLWT VPSFLISQVR RMNEATMLLK KPLPSVKKLL RRKTIERGVT BACU017046/1-664 MLKYQQMLWK ---------- ---------- ---------- ---------- bmy_01645T0/1-599 MLKYQEMLWK VPSFLIAQVR RMNEATMLLK KQLPSVKKLL RRKTIERGVI ENSTTRP00000001341/1-635 MLKYQEMLWK VPSFLIAQVR RMNEATMLLK KQLPSVKKLL RRKTIERGVI 651 700 ENSP00000392660/1-570 SPKTSKVLQK SPSARRMSDV PEGVIRVHAP LLSKVSMAIQ LNNQTKAKDI ENSBTAP00000025337/1-704 SPKTSKVLQK SPSTRRMSDV PEGVIRVHAP LLSKVSMAIQ LNSQTKVKDI BACU017046/1-664 ---------- -------SDV PEGVIRIHAP LLSKVSMAIQ LNSQTKAKDI bmy_01645T0/1-599 TK-------- ---------- ---------- ---------- ---------- ENSTTRP00000001341/1-635 SPKTSKVLQK SPSTRRMSDV PEGVIRIHAP LLSKVSMAIQ LNSQTKAKDI 701 750 ENSP00000392660/1-570 LAKFQYENSH GSSECIKIQN QRLYEIGGNI G----EHCLD PDAYILDVYR ENSBTAP00000025337/1-704 LAKFQCENSH GSSECIKIQN QRLYEIGGNI G----QHCLD PDAYILDVYH BACU017046/1-664 LAKFQYENSH GSSEGVKIQN QRLYEIGGNI GLISPPGACE KTANLLSNVR bmy_01645T0/1-599 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001341/1-635 LAKFQYEN-- ---------- ---------- ---------- ---------- 751 800 ENSP00000392660/1-570 INPQAEWVIK PQQSS ENSBTAP00000025337/1-704 VNPQAEWVIK PQQSV BACU017046/1-664 IK-------- ----- bmy_01645T0/1-599 ---------- ----- ENSTTRP00000001341/1-635 ---------- -----