KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:25:52 2014 Check: 00 .. Name: ENSP00000280800/1-589 Len: 589 Check: 1859 Weight: 1.00 Name: ENSBTAP00000025343/1-589 Len: 589 Check: 4444 Weight: 1.00 Name: ENSTTRP00000015829/1-491 Len: 589 Check: 35 Weight: 1.00 Name: bmy_13625T0/1-351 Len: 589 Check: 9513 Weight: 1.00 Name: BACU003437/1-589 Len: 589 Check: 2640 Weight: 1.00 // 1 50 ENSP00000280800/1-589 MVGQMYCYPG SHLARALTRA LALALVLALL VGPFLSGLAG AIPAPGGRWA ENSBTAP00000025343/1-589 MVAPMYGSPG GRLARAVTRA LALALVLALL VGLFLSGLTG AIPTPRGQRG ENSTTRP00000015829/1-491 ---------- ---------- ---------- ---------- ---------- bmy_13625T0/1-351 ---------- ---------- ---------- ---------- ---------- BACU003437/1-589 MVDPMYGAPG GRLARALTRA LALALVLALL VGLFLSGLTG AIPTPRGHRG 51 100 ENSP00000280800/1-589 RDGQVPPASR SRSVLLDVSA GQLLMVDGRH PDAVAWANLT NAIRETGWAF ENSBTAP00000025343/1-589 RGMPVPPASR CRSLLLDPET GQLRLVDGRH PDAVAWANLT NAIRETGWAF ENSTTRP00000015829/1-491 ---------- ---------- ---------- ---------- -------WAF bmy_13625T0/1-351 ---------- ---------- ---------- ---------- ---------- BACU003437/1-589 PGRPVPPASR CRSVLLNPET GQLRLVDGRH PDAVAWANLT NAIRETGWAF 101 150 ENSP00000280800/1-589 LELGTSGQYN DSLQAYAAGV VEAAVSEELI YMHWMNTVVN YCGPFEYEVG ENSBTAP00000025343/1-589 LELHTNGRFN DSLQAYAAGV VEAAVSEELI YMYWMNTVVN YCGPFEYEVG ENSTTRP00000015829/1-491 LELHTNGHYN DSLQAYAAGV VEAAVSEELI YMHWMNTVVN YCGPFEYEVS bmy_13625T0/1-351 ---------- ---------- ---------- ---------- ---------- BACU003437/1-589 LELHTNDHYN DSLQAYAAGV VEAAVSEELI YMHWMNTVVN YCGPFEYEVS 151 200 ENSP00000280800/1-589 YCERLKSFLE ANLEWMQEEM ESNPDSPYWH QVRLTLLQLK GLEDSYEGRV ENSBTAP00000025343/1-589 YCERLKNFLE ANLEWMQKEM ELNNGSAYWH QVRLTLLQLK GLEDSYEGSV ENSTTRP00000015829/1-491 YCERLKKFLE ANLEWMQKEM ELNNGSAYWH QVRLTLLQLK GLEDSYEGSV bmy_13625T0/1-351 ---------- ---------- ---------- ---------- ---------- BACU003437/1-589 YCERLKKFLE ANLEWMQTEM ELNNGSAYWH QVRLTLLQLK GLEDSYEGSV 201 250 ENSP00000280800/1-589 SFPAGKFTIK PLGFLLLQLS GDLEDLELAL NKTKIKPSLG SGSCSALIKL ENSBTAP00000025343/1-589 AFPTGKFTVK PLGFLLLQIS GDLEDLEVAL NKTKTNHAMG SGSCSALIKL ENSTTRP00000015829/1-491 TFPTGKFTIK PLGFLLLQIS GDLEDLELAL NKTKTKHATG SGSCSALIKL bmy_13625T0/1-351 ---------- ---------- ---------- --------MG SGSCSALIKL BACU003437/1-589 TFPTGKFTIK PLGFLLLQIS GDLEDLELAL NKTKTKHAMG SGSCSALIKL 251 300 ENSP00000280800/1-589 LPGQSDLLVA HNTWNNYQHM LRVIKKYWLQ FREGPWGDYP LVPGNKLVFS ENSBTAP00000025343/1-589 LPGQRDLLVA HNTWHSYQYM LRIMKKYWFQ FREGPQAEST RAPGNKVIFS ENSTTRP00000015829/1-491 LPGQSDLLVA HNTWHSYQYM LRIMKKYWFQ FREGPQAIYP -APGNRVIFS bmy_13625T0/1-351 LPGQSDLLVA HNTWHSYQYM LRIMKKYWFQ FREGPQEQST RAPGNRVTFS BACU003437/1-589 LPGQSDLLVA HNTWHSYQYM LRIMKKYWFQ FREGPQEQST RAPGNRVTFS 301 350 ENSP00000280800/1-589 SYPGTIFSCD DFYILGSGLV TLETTIGNKN PALWKYVRPR GCVLEWVRNI ENSBTAP00000025343/1-589 SYPGTIFSCD DFYILGSGLV TLETTIGNKN PALWKYVQPT GCVLEWMRNV ENSTTRP00000015829/1-491 SYPGTIFSCD DFYILGSGLV TLETTIGNRN SALWKYVQPE GCVLEWMRNV bmy_13625T0/1-351 SYPGTIFSCD DFYILGSGLV ALETTIGNRN SALWKYVQPE GCVLEWMRNV BACU003437/1-589 SYPGTIFSCD DFYILGSGLV ALETTIGNRN SALWKYVQPE GCVLEWMRNV 351 400 ENSP00000280800/1-589 VANRLASDGA TWADIFKRFN SGTYNNQWMI VDYKAFIPGG PSPGSRVLTI ENSBTAP00000025343/1-589 VANRLALDGD SWADIFKRFN SGTYNNQWMI VDYKAFVPGG PSPGRRVLTV ENSTTRP00000015829/1-491 VANRLALDGD SWADIFKRFN SGTYNNQWMI VDYKAFVPGG PSPGRRVLTI bmy_13625T0/1-351 VANRLALDGD SWADIFKRFN SGTYNNQWMI VDYKAFVPGG PSPGRRVLTI BACU003437/1-589 VANRLALDGD SWADIFKRFN SGTYNNQWMI VDYKAFVPGG PSPGRRVLTI 401 450 ENSP00000280800/1-589 LEQIPGMVVV ADKTSELYQK TYWASYNIPS FETVFNASGL QALVAQYGDW ENSBTAP00000025343/1-589 LEQIPGMVVV ADRTSELYQK TYWASYNIPS FESVFNASGL PALVARYGPW ENSTTRP00000015829/1-491 LEQIPGMVVV ADRTSELYQK TYWASYNIPS FESVFNASGL PTLVAHFGDW bmy_13625T0/1-351 LEQLPGMVVV ADRTSELYQK TYWASYNIPS FESVFNTSGL PALVAHFGDW BACU003437/1-589 LEQLPGMVVV ADRTSELYQK TYWASYNIPS FESVFNTSGL PALVAHFGDW 451 500 ENSP00000280800/1-589 FSYDGSPRAQ IFRRNQSLVQ DMDSMVRLMR YNDFLHDPLS LCKACNPQPN ENSBTAP00000025343/1-589 FSYDGSPRAQ IFRRNHSLVH DLDSMMRLMR YNDFLHDPLS LCKACTPKPN ENSTTRP00000015829/1-491 FSYDGSPRAQ IFRRNQSLVH DLNSMIRLMR YNDFLHDPLS LCKVCNPKPN bmy_13625T0/1-351 FSYDGSPRAQ IFRRNQSLVH DLNSMIRLMR YNDFLHDPLS LCKACNPKPN BACU003437/1-589 FSYDGSPRAQ IFRRNQSLVH DLNSMIRLMR YNDFLHDPLS LCKACNPKPN 501 550 ENSP00000280800/1-589 GENAISARSD LNPANGSYPF QALRQRSHGG IDVKVTSMSL ARILSLLAAS ENSBTAP00000025343/1-589 GENAISARSD LNPANGSYPF QALHQRSHGG IDVKVTSTAL AKALRLLAVS ENSTTRP00000015829/1-491 GENAVSARSD LNPANGSYPF QALHQRSHGG IDVKVTSTAL AKALRLLAVS bmy_13625T0/1-351 GENAISARSD LNPANGSYPF QALHQRSHGG IDVKVTSTAL AKALRLLAAS BACU003437/1-589 GENAISARSD LNPANGSYPF QALHQRSHGG IDVKVTSTTL AKALRLLAAS 551 600 ENSP00000280800/1-589 GPTWDQVPPF QWSTSPFSGL LHMGQPDLWK FAPVKVSWD ENSBTAP00000025343/1-589 GPTWDQLPPF QWSTSPFSGM LHMGQPDLWK FSPIEVSWD ENSTTRP00000015829/1-491 GPTWDQLPPF QWSSSPFSSL LHMGQPDLWK FSPIEVWWD bmy_13625T0/1-351 GPTWDQLPPF QWSTSPFSSL LHMGQPDLWK FSPIEVWWD BACU003437/1-589 GPTWDQLPPF QWSTSPFSSL LHMGQPCLWK FSPIEVWWD