KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:25:53 2014 Check: 00 .. Name: bmy_12115T0/1-212 Len: 237 Check: 181 Weight: 1.00 Name: BACU008908/1-203 Len: 237 Check: 8108 Weight: 1.00 Name: ENSTTRP00000007233/1-117 Len: 237 Check: 3846 Weight: 1.00 Name: ENSP00000263401/1-198 Len: 237 Check: 461 Weight: 1.00 Name: ENSBTAP00000025346/1-198 Len: 237 Check: 26 Weight: 1.00 // 1 50 bmy_12115T0/1-212 ---------- ---------- ----MAALTA EVFAALQSLL KASSKDVVRQ BACU008908/1-203 MPPRGCRSLP TARLRVPRSR DSGKMAALTA EVFAALQSLL KASSKDVVRQ ENSTTRP00000007233/1-117 ---------- ---------- ----MAALTA EVFAALQSLL KASSKDVVRQ ENSP00000263401/1-198 ---------- ---------- ----MAALTA EHFAALQSLL KASSKDVVRQ ENSBTAP00000025346/1-198 ---------- ---------- ----MAALTA ENFAALQSLL KASSKDVVRQ 51 100 bmy_12115T0/1-212 LCQESFSSSA LGSKKLLDVT CSSLSVTQEE AEQGSPSILQ LLQALHRLTR BACU008908/1-203 LCQESFSSSA LGSKKLLDVT CSSLSVTQEE AEQ------- ---------- ENSTTRP00000007233/1-117 LCQESFSSSA LGSKKLLDVT CSSLSVTQEE AEQ------- MLQALHCLTR ENSP00000263401/1-198 LCQESFSSSA LGLKKLLDVT CSSLSVTQEE AEE------- LLQALHRLTR ENSBTAP00000025346/1-198 LCQESFSSSA LGSKNLLDVT CSSLSVTQEE AEQ------- LLQALHRLTR 101 150 bmy_12115T0/1-212 LVVFHLLGEL RPKQIRRLAV WLSCIAHV-Q PLELPAVEEG LSHAGGVRTE BACU008908/1-203 ---------- ------RLAV WIPCIAHV-Q PLELPAVEER FSHAGGVRTE ENSTTRP00000007233/1-117 VVMIRDQSS- ------AEAN LSLCPENFHQ NLKNLLTKII LEHVSTWRAE ENSP00000263401/1-198 LVAFRDLSS- ------AEAI LALFPENFHQ NLKNLLTKII LEHVSTWRTE ENSBTAP00000025346/1-198 LAVFRDLSS- ------AEAI LALFPENFHQ NLKNLLTKII LEHVSAWRAE 151 200 bmy_12115T0/1-212 PSCAHTVSLP RLVDLDWRVD IRTSSDSISR MAVPTCLLQM KIQEDASLCG BACU008908/1-203 PSCPHTVSLP RLVDLDWRVD IRTSSDSISR MAVPTCLLQM KIQEDASLCG ENSTTRP00000007233/1-117 AQT-NQ---- ---------- ---------- ---------- ---------- ENSP00000263401/1-198 AQA-NQISLP RLVDLDWRVD IKTSSDSISR MAVPTCLLQM KIQEDPSLCG ENSBTAP00000025346/1-198 AQV-NQISLP RLVDLDWRVD IKTSSDSISR MAVPTCLLQM KIQEDPSLCG 201 250 bmy_12115T0/1-212 EQPSMSAVTV ELSKETLDTM LDGLGRIRDQ LSAVASK BACU008908/1-203 EQPSMSAVTV ELSKETLDTM LDGLGRIRDQ LSAVASK ENSTTRP00000007233/1-117 ---------- ---------- ---------- ------- ENSP00000263401/1-198 DKPSISAVTV ELSKETLDTM LDGLGRIRDQ LSAVASK ENSBTAP00000025346/1-198 DRPSVSAVTV ELSKETLDTM LDGLGRIRDQ LSAVASK