KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 4  Type: P  Thu May 15 17:25:54 2014  Check: 00 ..

 Name: bmy_16774T0/1-270         Len:    270  Check:  2569  Weight:  1.00
 Name: ENSTTRP00000008044/1-206  Len:    270  Check:  3758  Weight:  1.00
 Name: ENSBTAP00000025357/1-206  Len:    270  Check:  3758  Weight:  1.00
 Name: ENSP00000205194/1-206     Len:    270  Check:  3042  Weight:  1.00

//


                          1                                                   50
bmy_16774T0/1-270         MAPSHLSVRE MREDEKPLVL EMLKLTHSEP SVPAVWSWPL RHRPQLTAFL 
ENSTTRP00000008044/1-206  MAPSHLSVRE MREDEKPLVL EMLK------ ---------- ---------- 
ENSBTAP00000025357/1-206  MAPSHLSVRE MREDEKPLVL EMLK------ ---------- ---------- 
ENSP00000205194/1-206     MAPSHLSVRE MREDEKPLVL EMLK------ ---------- ---------- 


                          51                                                 100
bmy_16774T0/1-270         SPPATPAPDP SRAGPASSPP RSCCPREPPN ADCSSSPQAG VKDTENRVAL 
ENSTTRP00000008044/1-206  ---------- ---------- ---------- --------AG VKDTENRVAL 
ENSBTAP00000025357/1-206  ---------- ---------- ---------- --------AG VKDTENRVAL 
ENSP00000205194/1-206     ---------- ---------- ---------- --------AG VKDTENRVAL 


                          101                                                150
bmy_16774T0/1-270         HALTRPPALL LLAAASSGLR FVLASFALAL LLPVFLAVAA MKLGLRARWG 
ENSTTRP00000008044/1-206  HALTRPPALL LLAAASSGLR FVLASFALAL LLPVFLAVAA MKLGLRARWG 
ENSBTAP00000025357/1-206  HALTRPPALL LLAAASSGLR FVLASFALAL LLPVFLAVAA MKLGLRARWG 
ENSP00000205194/1-206     HALTRPPALL LLAAASSGLR FVLASFALAL LLPVFLAVAA VKLGLRARWG 


                          151                                                200
bmy_16774T0/1-270         SLPPPGGLGG PWVAVRGSGD VCGVLALAPG SSAGDGARVT RLSVSRWHRR 
ENSTTRP00000008044/1-206  SLPPPGGLGG PWVAVRGSGD VCGVLALAPG SSAGDGARVT RLSVSRWHRR 
ENSBTAP00000025357/1-206  SLPPPGGLGG PWVAVRGSGD VCGVLALAPG SSAGDGARVT RLSVSRWHRR 
ENSP00000205194/1-206     SLPPPGGLGG PWVAVRGSGD VCGVLALAPG TNAGDGARVT RLSVSRWHRR 


                          201                                                250
bmy_16774T0/1-270         RGVGRRLLAF AESRARAWAG GMGEPRARLV VPVAVAAWGV AGMLEGCGYQ 
ENSTTRP00000008044/1-206  RGVGRRLLAF AESRARAWAG GMGEPRARLV VPVAVAAWGV AGMLEGCGYQ 
ENSBTAP00000025357/1-206  RGVGRRLLAF AESRARAWAG GMGEPRARLV VPVAVAAWGV AGMLEGCGYQ 
ENSP00000205194/1-206     RGVGRRLLAF AEARARAWAG GMGEPRARLV VPVAVAAWGV GGMLEGCGYQ 


                          251                                                300
bmy_16774T0/1-270         AEGSWGCMGY TLVREFSKEL 
ENSTTRP00000008044/1-206  AEGSWGCMGY TLVREFSKEL 
ENSBTAP00000025357/1-206  AEGSWGCMGY TLVREFSKEL 
ENSP00000205194/1-206     AEGGWGCLGY TLVREFSKDL