KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:25:56 2014 Check: 00 .. Name: ENSP00000386722/1-740 Len: 763 Check: 422 Weight: 1.00 Name: ENSBTAP00000025380/1-740 Len: 763 Check: 779 Weight: 1.00 Name: bmy_03678T0/1-604 Len: 763 Check: 5853 Weight: 1.00 Name: BACU018690/1-685 Len: 763 Check: 1184 Weight: 1.00 Name: ENSTTRP00000002815/1-684 Len: 763 Check: 1471 Weight: 1.00 // 1 50 ENSP00000386722/1-740 MQPPPRKVKV TQELKNIQVE QMTKLQAKHQ AECDLLEDMR TFSQKKAAIE ENSBTAP00000025380/1-740 MQPPPRKVKV TQELKNIQVE QMTKLQAKHQ AECDLLEDMR TFSQKKAAIE bmy_03678T0/1-604 ---------- ---------- ---------- ---------- ---------- BACU018690/1-685 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002815/1-684 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000386722/1-740 REYAQGMQKL ASQYLKRDWP GVKADDRNDY RSMYPVWKSF LEGTMQVAQS ENSBTAP00000025380/1-740 REYAQGIQKL ASQYLKRDWP GIKADDRNDY RSMYPVWKSF LEGTMQVAQS bmy_03678T0/1-604 ---------- ---------- ---------- --MYPVWKSF LEGTMQ---- BACU018690/1-685 ------IQKL ASQYLKRDWP GIKADDRNDY RSMYPVWKSF LEGTMQVAQS ENSTTRP00000002815/1-684 ------IQKL ASQYLKRDWP GIKADDRNDY RSMYPVWKSF LEGTMQVAQS 101 150 ENSP00000386722/1-740 RMNICENYKN FISEPARTVR SLKEQQLKRC VDQLTKIQTE LQETVKDLAK ENSBTAP00000025380/1-740 RINICENYKN FISEPARTVR SLKEQQLKRC VDQLTKIQTE LQETVKDLAK bmy_03678T0/1-604 ---------- ---------- ---------C VDQLTKIQTE LQETVKDLAK BACU018690/1-685 RINICENYKN FISEPARTVK SLKEQQLKRC VDQLTKIQTE LQETVKDLAK ENSTTRP00000002815/1-684 RINICENYKN FISEPARTVK SLKEQQLKRC VDQLTKIQTE LQETVKDLAK 151 200 ENSP00000386722/1-740 GKKKYFETEQ MAHAVREKAD IEAKSKLSLF QSRISLQKAS VKLKARRSEC ENSBTAP00000025380/1-740 GKKKYFETEQ MAHAVREKAD IESKSKLSLF QSRISLQKAS VKLKARRSEC bmy_03678T0/1-604 GKKKYFETEQ MAHAVREKAD IEAKSKLSLF QSRISLQKAS VKLKARRSEC BACU018690/1-685 GKKKYFETEQ MAHAVREKAD IEAKSKLSLF QSRISLQKAS VKLKARRSEC ENSTTRP00000002815/1-684 GKKKYFETEQ MAHAVREKAD IEAKSKLSLF QSRISLQKAS VKLKARRSEC 201 250 ENSP00000386722/1-740 NSKATHARND YLLTLAAANA HQDRYYQTDL VNIMKALDGN VYDHLKDYLI ENSBTAP00000025380/1-740 NSKATHARND YLLTLAAANA HQDRYYQTDL VNIMKALDGN VYDHLKDYLI bmy_03678T0/1-604 NSKATHARND YLLTLAAANA HQDRYYQTDL VNIMKV---- ---------- BACU018690/1-685 NSKATHARND YLLTLAAANA HQDRYYQTDL VNIMKALDGN VYDHLKDYLI ENSTTRP00000002815/1-684 NSKATHARND YLLTLAAANA HQDRYYQTDL VNIMKALDGN VYDHLKDYLI 251 300 ENSP00000386722/1-740 AFSRTELETC QAVQNTFQFL LENSSKV-VR DYNLQLFLQE NAVFHKPQPF ENSBTAP00000025380/1-740 AFSRTELETC QAVQNTFQFL LETSSKV-VR DYNLQLFLQE NAVFHKPQPF bmy_03678T0/1-604 ---------- ---------- --------VR DYNLQLFLQE NAVFHKPQPF BACU018690/1-685 AFSRTELETC QAVQNTFQFL LETSSKASVR DYNLQLFLQE NAVFHKPQPF ENSTTRP00000002815/1-684 AFSRTELETC QAVQNTFQFL LETSSKV-VR DYNLQLFLQE NAVFHKPQPF 301 350 ENSP00000386722/1-740 QFQPCDSDT- ---------- ---------- -SRQLESETG TTEEHSLNKE ENSBTAP00000025380/1-740 QFQPCDSDT- ---------- ---------- -SRQLESETG TTEEHSLNKE bmy_03678T0/1-604 QFQPCDSDTL ACFIPKMDHA TVRDEALMFS DSRQLESETG TTEEHSLNKE BACU018690/1-685 QFQPCDSDT- ---------- ---------- -SRQLESETG TTEEHSLNKE ENSTTRP00000002815/1-684 QFQPCDSDT- ---------- ---------- -SRQLESETG ITEEHSLNKE 351 400 ENSP00000386722/1-740 ARKWATRVAR EHKNIVHQQR VLNDLECHGA AVSEQSRAEL EQKIDEAREN ENSBTAP00000025380/1-740 ARKWATRVAR EHKTIVHQQR VLDDLECHGV SVSEQNRAEL EQKIDEAKEN bmy_03678T0/1-604 ARKWATRVAR EHKNIVHQQR VLDDLECHGV AVSEQGRTEL EQKIDEAREN BACU018690/1-685 ARKWATRVAR EHKNIVHQQR VLDDLECHGV AVSEQGRTEL EQKIDEAREN ENSTTRP00000002815/1-684 ARKWATRVAR EHKNIVHQPR VLDDLECHGV AVSEQGRTEL EQKIDEAREN 401 450 ENSP00000386722/1-740 IRKAEIIKLK AEARLDLLKQ IGVSVDTWLK SAMNQVMEEL ENERWARPPA ENSBTAP00000025380/1-740 IRKAEIIKLK AEARLDLLKQ IGVSVDTWLK SAMNQVMEEL ENERWARLPA bmy_03678T0/1-604 IRKAEIIKLK AEARLDLLKQ IGVSVDTWLK SAMNQVMEEL ENERWARLPA BACU018690/1-685 IRKAEIIKLK AEARLDLLKQ IGVSVDTWLK SAMNQVMEEL ENERWARLPA ENSTTRP00000002815/1-684 IRKAEIIKLK AEARLDLLKQ IGVSVDTWLK SAMNQVMEEL ENERWARLPA 451 500 ENSP00000386722/1-740 VTSNGTLHSL NADTEREEGE EFEDNMDVFD DSSSSPSGTL RNYPLTCKVV ENSBTAP00000025380/1-740 VTNNGTLHSL NADTEREEGE EFEDNMDVFD DSSSSPSGTL RNYPLTCKVV bmy_03678T0/1-604 VTNNGTLQSL NADTEREEGE EFEDNMDVFD DSSSSPSGTL RNYPLTCKVV BACU018690/1-685 VTNNGTLHSL NADTEREEGE EFEDNMDVFD DSSSSPSGTL RNYPLTCKVV ENSTTRP00000002815/1-684 VTNNGTLHSL NADTEREEGE EFEDNMDVFD DSSSSPSGTL RNYPLTCKVV 501 550 ENSP00000386722/1-740 YSYKASQPDE LTIEEHEVLE VIEDGDMEDW VKARNKVGQV GYVPEKYLQF ENSBTAP00000025380/1-740 YSYKASQPDE LTIEEHEVLE VIEDGDMEDW VKARNKVGQV GYVPEKYLQF bmy_03678T0/1-604 YSYKASQPDE LTIEEHEVLE VIEDGDMEDW --ARNKVGQV GYVPEKYLQF BACU018690/1-685 YSYKASQPDE LTIEEHEVLE VIEDGDMEDW VKARNKVGQV GYVPEKYLQF ENSTTRP00000002815/1-684 YSYKASQPDE LTIEEHEVLE VIEDGDMEDW VKARNKVGQV GYVPEKYLQF 551 600 ENSP00000386722/1-740 PTSNSLLSML QSLAALDSRS HTSSNSTEAE LVSGSLNGDA SVCFVKALYD ENSBTAP00000025380/1-740 PTSNSLLSML QSLAALDSRS HTSSNSTEAE LVSGSLNGDA SVCFVKALYD bmy_03678T0/1-604 PTSNSLLSML QSLAALDSRS HTSSNSTEAE LVSGSLNGDA SVCFVKALYD BACU018690/1-685 PTSNSLLSML QSLAALDSRS HTSSNSTEAE LVSGSLNGDA SVCFVKALYD ENSTTRP00000002815/1-684 PTSNSLLSML QSLAALDSRS HTSSNSTEAE LVSGSLNGDA SVCFVKALYD 601 650 ENSP00000386722/1-740 YEGQTDDELS FPEGAIIRIL NKENQDDDGF WEGEFNGRIG VFPSVLVEEL ENSBTAP00000025380/1-740 YEGQTDDELS FPEGAIIRIL NKENQDDDGF WEGEFNGRIG VFPSVLVEEL bmy_03678T0/1-604 YEGQTDDELS FPEGAIIRIL NKENQDDDGF WEGEFNGRIG VFPSVLVEEL BACU018690/1-685 YEGQTDDELS FPEGAIIRIL NKENQDDDGF WEGEFNGRIG VFPSVLVEEL ENSTTRP00000002815/1-684 YEGQTDDELS FPEGAIIRIL NKENQDDDGF WEGEFNGRIG VFPSVLVEEL 651 700 ENSP00000386722/1-740 SASENGDTPW MREIQISPSP KPHASLPPLP LYDQPPSSPY PSPDKRSSLY ENSBTAP00000025380/1-740 STSENGDTPW MREIQVSPSP KPPGSLPPLP LYDQPPSSPY PSPDKRGSQY bmy_03678T0/1-604 SASENGDTPW MREIQISPSP KLPGSLPPLP LYDQPPSSPY PSPDKRSSQY BACU018690/1-685 SASENGDTPW MREIQISPSP KLPGSLPPLP LYDQPPSSPY PSPDKRSSQY ENSTTRP00000002815/1-684 SASENGDTPW MREIQISPSP KLPGSLPPLP LYDQPPSSPY PSPDKRSSQY 701 750 ENSP00000386722/1-740 FPRSPSANEK SLHAESPGFS QASRHTPETS YGKLRPVRAA PPPPTQNHRR ENSBTAP00000025380/1-740 FSRSPSANEN SFHAESPGFS QASRHTPETS YGKLRPVRAA PPPPTQNHRR bmy_03678T0/1-604 FPRSPSANEN SFHAESPGFS QASRHTPETS YGKLRPVRAA PPPPTQNHRR BACU018690/1-685 FPRSPSANEN SFHAESPGFS QASRHTPETS YGKLRPVRAA PPPPTQNHRR ENSTTRP00000002815/1-684 FPRSPSANEN SFHAESPGFS QASRHTPETS YGKLRPVRAA PPPPTQNHRR 751 800 ENSP00000386722/1-740 PAEKIEDVEI TLV ENSBTAP00000025380/1-740 PAEKIEDVEI TLV bmy_03678T0/1-604 PAEKIEDVEI TLV BACU018690/1-685 PAEKIEDVEI TLV ENSTTRP00000002815/1-684 PAEKIEDVEI TLV