KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:25:57 2014 Check: 00 .. Name: bmy_13157T0/1-208 Len: 295 Check: 7387 Weight: 1.00 Name: BACU011563/1-295 Len: 295 Check: 6621 Weight: 1.00 Name: ENSP00000225777/1-224 Len: 295 Check: 5037 Weight: 1.00 Name: ENSTTRP00000010283/1-224 Len: 295 Check: 5678 Weight: 1.00 Name: ENSBTAP00000025388/1-224 Len: 295 Check: 4111 Weight: 1.00 // 1 50 bmy_13157T0/1-208 ---------- ---------- ---MSHEGS- ---------- ---------- BACU011563/1-295 VSQLQADFTL LDRGSGLRVE VFCQASSGSP PITYRLVRRS GYIHMQQTRN ENSP00000225777/1-224 ---------- ------MESG AYGAAKAGG- ---------- ---------- ENSTTRP00000010283/1-224 ---------- ------MESG AYGAAKAGG- ---------- ---------- ENSBTAP00000025388/1-224 ---------- ------MESG AYGAPRAGG- ---------- ---------- 51 100 bmy_13157T0/1-208 ---------- ---------- ------S--H SALPLPPP-- ---------- BACU011563/1-295 PGQPANFSFP LNQTADWFRC QAENDVSVQH TPFTLVPPVA LRTSIAEGRD ENSP00000225777/1-224 ---------- ---------- ------SFDL RRFLTQPQVV ARAVC----- ENSTTRP00000010283/1-224 ---------- ---------- ------SFDL RRFLTQPQVV VRAVC----- ENSBTAP00000025388/1-224 ---------- ---------- ------SFDL RRFLKQPQVV VRAVC----- 101 150 bmy_13157T0/1-208 ---QVFALIV FSCIFGEGYS NTPSSKQQYC VFNLNEDACR FGSAIGVLAF BACU011563/1-295 PGREVFALIV FSCIFGEGYS NTHISKQQYC VFNRNEDACR FGSAIGVLAF ENSP00000225777/1-224 ---LVFALIV FSCIYGEGYS NAHESKQMYC VFNRNEDACR YGSAIGVLAF ENSTTRP00000010283/1-224 ---LVFALIV FSCIFGEGYS NTHESRQQYC VFNRNEDACR FGSAIGVLAF ENSBTAP00000025388/1-224 ---LVFALIV FSCIFGEGYS NTHDSQQQYC VFNRNEDACR YGSAIGVLAF 151 200 bmy_13157T0/1-208 LASAFFLVVD VYFPQISNAT DRKYLVISDL LFSALWTFLW FVGFCFLANQ BACU011563/1-295 LASAFFLVVD VYFPQISNAT DRKYLVISDL LFSALWTFLW FVGFCFLANQ ENSP00000225777/1-224 LASAFFLVVD AYFPQISNAT DRKYLVIGDL LFSALWTFLW FVGFCFLTNQ ENSTTRP00000010283/1-224 LASAFFFVID VYFPQISNAT DRKYLVISDL LFSALWTFMW FVSFCFLANQ ENSBTAP00000025388/1-224 LASAFFFVVD IYFPQISNAT DRKYLVIGDL LFSALWTFLW FVGFCFLTNQ 201 250 bmy_13157T0/1-208 WAATEPKYVL VGADSARAAI TFSFFSVFSW GVLASLAYQR YKAGVDDFIQ BACU011563/1-295 WAATKPEYVL VGADSARAAI TFSFFSVFSW GVLASLAYQR YKAGVDDFIQ ENSP00000225777/1-224 WAVTNPKDVL VGADSVRAAI TFSFFSIFSW GVLASLAYQR YKAGVDDFIQ ENSTTRP00000010283/1-224 WAATKPEYVL VGADSARAAI AFSFFSVFSW GVLASLAYQR YKAGVDDFIQ ENSBTAP00000025388/1-224 WAATKKNDVH VEADSARAAI TFSFFSIFSW CVLAFLAYQR YKAGVDEFIQ 251 300 bmy_13157T0/1-208 NYVDPTLDPS TAYASYPGAP ADSYQQPPFT QNAETTEGYQ PPPVY BACU011563/1-295 NYVDPTLDPS TAYASYPGAP ADSYQQPPFT QSAETTEGYQ PPPVY ENSP00000225777/1-224 NYVDPTPDPN TAYASYPGAS VDNYQQPPFT QNAETTEGYQ PPPVY ENSTTRP00000010283/1-224 NYVDPTLDPS TAYASYPGAP VDSYQQPPFT QNAETTEGYQ PPPVY ENSBTAP00000025388/1-224 NYVDPTPDPS TAYASYPGVP ADTYQQPPFT QNAESTEGYQ PPPVY