KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 5  Type: P  Thu May 15 17:25:57 2014  Check: 00 ..

 Name: ENSP00000379269/1-160     Len:    165  Check:  6360  Weight:  1.00
 Name: ENSBTAP00000025389/1-160  Len:    165  Check:  6967  Weight:  1.00
 Name: ENSTTRP00000003451/1-160  Len:    165  Check:  7251  Weight:  1.00
 Name: bmy_10729T0/1-165         Len:    165  Check:  7314  Weight:  1.00
 Name: BACU005226/1-160          Len:    165  Check:  8204  Weight:  1.00

//


                          1                                                   50
ENSP00000379269/1-160     MLLLLLSIIV LHVAVLVLLF VSTIVSQWIV GNGHATDLWQ NCSTSSSGNV 
ENSBTAP00000025389/1-160  MLLLLLGIIV LHVAVLVLLF VSTIVSQWMV GNGHATDLWQ NCSTSLMGSV 
ENSTTRP00000003451/1-160  MLLLLLGIIV LHVAVLVLLF VSTIVSQWMV GNGHATDLWQ NCSTSSLGNV 
bmy_10729T0/1-165         MLLLLLGIIV LHVAVLVLLF VSTIVSQWMV GNGHATDLWQ NCSTSSLSNV 
BACU005226/1-160          MLLLLLGIIV LHVAVLVLLF VSTIVSQWMV GNGHATDLWQ NCSTSSSSNV 


                          51                                                 100
ENSP00000379269/1-160     HHCFSSSPN- ----EWLQSV QATMILSIIF SILSLFLFFC QLFTLTKGGR 
ENSBTAP00000025389/1-160  QHCFSSSAN- ----EWLQSV QATMILSIIF SVLSLFLFFC QLFTLTKGGR 
ENSTTRP00000003451/1-160  QHCFTSSAN- ----EWLQSV QATMILSIIF SVLSLFLFFC QLFTLTKGGR 
bmy_10729T0/1-165         QHCFTSSANV SPPSEWLQSV QATMILSIIF SVLSLFLFFC QLFTLTKGGR 
BACU005226/1-160          QHCFTSSAN- ----EWLQSV QATMILSIIF SVLSLFLFFC QLFTLTKGGR 


                          101                                                150
ENSP00000379269/1-160     FYITGIFQIL AGLCVMSAAA IYTVRHPEWH LNSDYSYGFA YILAWVAFPL 
ENSBTAP00000025389/1-160  FYITGVFQIL AGLCVMSAAS IYTVRHPEWH FNSDGSYGFA YILAWVAFPL 
ENSTTRP00000003451/1-160  FYITGVFQIL AGLCVMSAAS IYTVRHPEWH LNSENSYGFA YILAWVAFPL 
bmy_10729T0/1-165         FYITGVFQIL AGLCVMSAAS IYTVRHPEWH PNSENSYGFA YILAWVAFPL 
BACU005226/1-160          FYITGVFQIL AGLCVMSAAS IYTVRHPEWH PNSENSYGFA YILAWVAFPL 


                          151                                                200
ENSP00000379269/1-160     ALLSGVIYVI LRKRE 
ENSBTAP00000025389/1-160  ALLSGVIYVI LRKRE 
ENSTTRP00000003451/1-160  ALLSGVIYVI LRKRE 
bmy_10729T0/1-165         ALLSGVIYVI LRKRE 
BACU005226/1-160          ALLSGVIYVI LRKRE