KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 5  Type: P  Thu May 15 17:25:57 2014  Check: 00 ..

 Name: ENSP00000274458/1-202     Len:    202  Check:  4140  Weight:  1.00
 Name: bmy_02628T0/1-188         Len:    202  Check:  7946  Weight:  1.00
 Name: BACU020095/1-202          Len:    202  Check:  4338  Weight:  1.00
 Name: ENSTTRP00000012892/1-202  Len:    202  Check:  3694  Weight:  1.00
 Name: ENSBTAP00000025390/1-202  Len:    202  Check:  2093  Weight:  1.00

//


                          1                                                   50
ENSP00000274458/1-202     MAVPAALILR ESPSMKKAVS LINAIDTGRF PRLLTRILQK LHLKAESSFS 
bmy_02628T0/1-188         ---------- ----MKKAVS LINEIDIGSF PRLLTRILQK LHLKAENSFS 
BACU020095/1-202          MAASTALILQ ESPSMKKAVS LINEIDIGRF PRLLTRILQK LHLKAENSFS 
ENSTTRP00000012892/1-202  MAASAALILR ESPSMKKAVS LINEIDIGRF PRLLTRILQK LHLKAENSFS 
ENSBTAP00000025390/1-202  MAASAALILR ESPSMKKAVS LINEIDIGRF PRLLTRILQK LHLKAESSFS 


                          51                                                 100
ENSP00000274458/1-202     EEEEEKLQAA FSLEKQDLHL VLETISFILE QAVYHNVKPA ALQQQLENIH 
bmy_02628T0/1-188         EEEEERLQAA FSLERQDLHL ALATISFILE QAVYHNVKPA ALQQQLENIH 
BACU020095/1-202          EEEEERLQAA FSLERQDLHL VLATISFILE QAVYHNVKPT ALQQQLENIH 
ENSTTRP00000012892/1-202  EEEEEKLQAA FSLERQDLHL VLETISFILE QAVYYNVKPA ALQQQLENIH 
ENSBTAP00000025390/1-202  EEEEEKLQVA FSLEKQDLHL VLETISFILE QAVYHNVKPA ALQQQLESIH 


                          101                                                150
ENSP00000274458/1-202     LRQDKAEAFV NTWSSMGQET VEKFRQRILA PCKLETVGWQ LNLQMAHSAQ 
bmy_02628T0/1-188         LRQDKAEAFV NAWSSMGQET IEKFRQRILA PHRLEAVGWQ LNLQMAHSSQ 
BACU020095/1-202          LRQDKAEAFV NAWSSMGQET VEKFRQRILA PHKLETVGWQ LNLQMAHSAQ 
ENSTTRP00000012892/1-202  LRQDKAEAFV SAWSSVGQET IEKFRQRILA PHKLETVGWQ LNLQMAHSAQ 
ENSBTAP00000025390/1-202  LRQDKAEAFA SAWSSMGQET IEKFRQRILA PHKLETVGWQ LNLQMAHSAE 


                          151                                                200
ENSP00000274458/1-202     AKLKSPQAVL QLGVNNEDSK SLEKVLVEFS HKELFDFYNK LETIQAQLDS 
bmy_02628T0/1-188         AKLKSPQAAL QLGVSNEESK SLKKVLVEFS HKELFDFYNK LVTIQAQLDS 
BACU020095/1-202          AKLKSPQAVL QLGVSNEGSK SLKKVLVEFS HKELFDFYNK LVIIQAQLDS 
ENSTTRP00000012892/1-202  AKLKSPQAVL QLGVSNEDSK SLKKVLVEFS HKELFDFYNK LETIQAQLDS 
ENSBTAP00000025390/1-202  AKLKSPQAVL QLGVSNEDSK SLQKVLVEFS HKELFDFYNK LETIQAQLDS 


                          201                                                250
ENSP00000274458/1-202     LT 
bmy_02628T0/1-188         LT 
BACU020095/1-202          LT 
ENSTTRP00000012892/1-202  LT 
ENSBTAP00000025390/1-202  LT