KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:25:59 2014 Check: 00 .. Name: ENSBTAP00000025394/1-331 Len: 444 Check: 3501 Weight: 1.00 Name: ENSTTRP00000010782/1-444 Len: 444 Check: 494 Weight: 1.00 Name: bmy_09103T0/1-315 Len: 444 Check: 6931 Weight: 1.00 Name: BACU010128/1-282 Len: 444 Check: 6979 Weight: 1.00 // 1 50 ENSBTAP00000025394/1-331 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010782/1-444 NVDATNIGYH AYLTGFFHPT WARGLRASAR TAAGARLSRP ERARPAAGSP bmy_09103T0/1-315 ---------- ---------- ---------- ---------- ---------- BACU010128/1-282 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000025394/1-331 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010782/1-444 TGPGARAAPP PGLPQSAPAA HAHSPLAASA PPVFGRAATG LLLRAGRGAR bmy_09103T0/1-315 ---------- ---MAAPSGV HLFVRRAILA INNFKDNPVG CRVESL---- BACU010128/1-282 ---------- ---------- ---------- ---------- ---------- 101 150 ENSBTAP00000025394/1-331 ---------- ---LNIRLFL LPGCHRIFSS PLNHIYLHTQ STSQQRRNFF ENSTTRP00000010782/1-444 ARGHVTDANM AAPSGVHLFV RRGCHRIFSS SLNHIYLHKQ SSSQQRRNFF bmy_09103T0/1-315 ---------- ---FQICLFM LLGCHRIFSS PLNHIYLHKQ SSSQQRRNFF BACU010128/1-282 ---------- ---LKICLFL LLGCHRIFSS PLNHIYLHKQ SSSQQRRNFF 151 200 ENSBTAP00000025394/1-331 FRRQREISHN IVLPAAVSSA HPVPKHIKKP DYVTTGIVPD WGDSIEVKNE ENSTTRP00000010782/1-444 FRRQREISHS IVLPAAVSSA HPVPKHIKKP DYVTTGIVPD WGDSIEVKNE bmy_09103T0/1-315 FRRQREISHS IVLPAAVSSA HPVPKHIKKP DYVTTGIVPD WGDSIEVKNE BACU010128/1-282 FRRQREISHS IVLPAAVSSA HPVPKHIKKP DYVTTGIVPD WGDSIEVKNE 201 250 ENSBTAP00000025394/1-331 DQIQGLLQAC QLARHVLLLA GKSLKVDMTT EEIDALVHQE IISHDAYPSP ENSTTRP00000010782/1-444 DQIQGLRQAC QLARHVLLLA GKSLKVDMTT EEIDALVHQE IISHDAYPSP bmy_09103T0/1-315 DQIQGLRQAC QLARHVLLLA GKSLKVDMTT EEIDALVHQE IISHDAYPSP BACU010128/1-282 DQIQGLRQAC QLARHVLLLA GKSLKVDMTT EEIDALVHQE IISHDAYPSP 251 300 ENSBTAP00000025394/1-331 LGYGGFPKSV CTSVNNVLCH GIPDSRPLQD GDIINIDVTV YYNGYHGDTS ENSTTRP00000010782/1-444 LGYGGFPKSV CTSVNNVLCH GIPDSRPLQD GDIINIDVTV YYNGYHGDTS bmy_09103T0/1-315 LGYGSFPKSV CTSVNNVLCH GIPDSRPLQD GDIINIDVTV YYNGYHGDTS BACU010128/1-282 LGYGGFPKSV CTSVNNVLCH GIPDSRPLQD GDIINIDVTV YYNGYHGDTS 301 350 ENSBTAP00000025394/1-331 ETFLVGNVDE CGKKLVEVAR RCRDEAIAAC RAGAPFSVIG NTISQITHQN ENSTTRP00000010782/1-444 ETFLVGNVDE CGKKLVEVAR RCRDEAIAAC RAGAPFSVIG NTISQITHQN bmy_09103T0/1-315 ETFLVGNVDE CGKKLVEVAR RCRDEAIAAC RAGAPFSVIG NTISQITHQN BACU010128/1-282 ETFLVGNVDE CGKKLVEIAR RCRDEAIAAC RAGAPFSVIG NTISQITHQN 351 400 ENSBTAP00000025394/1-331 GLQVCPHFVG HGIGSYFHGH PEIWHHANDS NLLMEEGMAF TIEPIVTEGS ENSTTRP00000010782/1-444 GLQVCPHFVG HGIGSYFHGH PEIWHHANDS DLRMEEGMAF TVEPIITEGS bmy_09103T0/1-315 GLQVCPHFVG HGIGSYFHGH PEIWHHANDS DLRMEEGMAF TVGQC----- BACU010128/1-282 RLHVCPHFVG HGIGSYFHGH PEIWHHANDS DLRMEEGMAF TVGQC----- 401 450 ENSBTAP00000025394/1-331 PEFKVLEDSW TVVSLDNQRS AQFEHTVLIT SRGAQILTKL PYEA ENSTTRP00000010782/1-444 PEFKVLEDAW TVVSLDNQRS AQFEHTVLIT SGGAQILTKL PHEA bmy_09103T0/1-315 ---------- ---------- ---------- ---------- ---- BACU010128/1-282 ---------- ---------- ---------- ---------- ----