KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:26:00 2014 Check: 00 .. Name: bmy_00634T0/1-716 Len: 722 Check: 732 Weight: 1.00 Name: BACU008538/1-675 Len: 722 Check: 3388 Weight: 1.00 Name: ENSTTRP00000000035/1-675 Len: 722 Check: 441 Weight: 1.00 Name: ENSP00000453858/1-681 Len: 722 Check: 8213 Weight: 1.00 Name: ENSBTAP00000025396/1-681 Len: 722 Check: 6724 Weight: 1.00 // 1 50 bmy_00634T0/1-716 MFRKKKKKRP EISAPQNFQH RVHTSFDPKE GKFVGLPPQW QNILDTLRRP BACU008538/1-675 MFRKKKKKRP EISAPQNFQH RVHTSFDPKE GKFVGLPPQW QNILDTLRRP ENSTTRP00000000035/1-675 MFRKKKKKRP EISAPQNFQH RVHTSFDPKE GKFVGLPPQW QNILDTLRRP ENSP00000453858/1-681 MFRKKKKKRP EISAPQNFQH RVHTSFDPKE GKFVGLPPQW QNILDTLRRP ENSBTAP00000025396/1-681 MFRKKKKKRP EISAPQNFQH RVHTSFDPKE GKFVGLPPQW QNILDTLRRP 51 100 bmy_00634T0/1-716 KPVVDPSRIT RVQLQPMKTV VRGSAAPTDG YISGLLNDIR KLSVISSNTL BACU008538/1-675 KPVVDPSRIT RVQLQPMKTV VRGSAAPTDG YISGLLNDIQ KLSVISSNTL ENSTTRP00000000035/1-675 KPVVDPSRIT RVQLQPMKTV VRGSAAPMDG YISGLLNDIQ KLSVISSNTL ENSP00000453858/1-681 KPVVDPSRIT RVQLQPMKTV VRGSAMPVDG YISGLLNDIQ KLSVISSNTL ENSBTAP00000025396/1-681 KPVVDPSRIT RVQLQPMKTV VRGSSVPTDG YISGLLNDIQ KLSVISSNTL 101 150 bmy_00634T0/1-716 RGRSPTSRRR AQSLGLLGDE QWAADPDMYL QSPQSERRDP HGLYLSCNGA BACU008538/1-675 RGRSPTSRRR AQSLGLLGDE QWAADPDMYL QRPQSERRDP RGLYLSCNGA ENSTTRP00000000035/1-675 RGRSPTSRRR AQSLGLLGDE QWAANSDMYL QSPQSEHRDP HGLYLSCNGA ENSP00000453858/1-681 RGRSPTSRRR AQSLGLLGDE HWATDPDMYL QSPQSERTDP HGLYLSCNGG ENSBTAP00000025396/1-681 RGRSPTSRRR AQSLGLLGDE QWAADPDMYL QSPQSERSDP HGLYLSCNGG 151 200 bmy_00634T0/1-716 APAGRRHVPR PEPQSPRVLP SGLATKAQSL GPTEFQGAPQ R------CLQ BACU008538/1-675 APAGRRHVPR PEPQSPRVLP SGLATKAQSL GPTEFQGAPQ R------CLQ ENSTTRP00000000035/1-675 APAGRRHVPW PEPQSPRVLP SGLATKAQSL GPTEFQGAPQ R------CLQ ENSP00000453858/1-681 TPAGHKQMPW PEPQSPRVLP NGLAAKAQSL GPAEFQGASQ RCLQLGACLQ ENSBTAP00000025396/1-681 APAGRRQVPW PELQSPRVLP NGLAAKAQSL GPAEFQGATQ RCLQLGTCLQ 201 250 bmy_00634T0/1-716 SSPNGTSAAT AAGRWGPKTA GHGSEEARPQ SCLVGSAAGR PGGEGSPSPK BACU008538/1-675 SSPTGTSAAT AAGRRGPKTA GHGSEEAWPQ SCLVGSAAGR PGGEGSPSPK ENSTTRP00000000035/1-675 SSPTGTSAST AAGRRGPKTA GHGSEEARPQ SCLVGSAAGR PGGEGSPSPK ENSP00000453858/1-681 SSPPGASPPT GTNRHGMKAA KHGSEEARPQ SCLVGSATGR PGGEGSPSPK ENSBTAP00000025396/1-681 SSPTGTSPPT ATGRRGTKTA RHGPEEARPQ SCLVGSAAGR PGGEGSPSPK 251 300 bmy_00634T0/1-716 APESSLKRRL FRSMFLSAPA AAPPSSSKPG PPPQSKPNSS SRPLQKDGPP BACU008538/1-675 APESSLKRRL FRSMFLSAPA AAPPSSSKPG PPPQSKPNSS SRPLQKDRPP ENSTTRP00000000035/1-675 TPESSLKRRL FRSMFLSAPA AAPPSSSKPG PPPQSKPNAS FRPLQKDLPP ENSP00000453858/1-681 TRESSLKRRL FRSMFLSTAA TAPPSSSKPG PPPQSKPNSS FRPPQKDNPP ENSBTAP00000025396/1-681 TQESSLKRRL FRSMFLSAPA TAPPSSSKPG PPAQSKPSSS FRPALKGGPS 301 350 bmy_00634T0/1-716 SLVAKAQSLP SDQPVGTFSP LATSDTSSPQ KSLRTAPAAS PPPGRSSPAG BACU008538/1-675 SLVAKAQSFP SDQPVGTFSP LATSDTSSPQ KSLRTAPAAG PPPGRSSPAG ENSTTRP00000000035/1-675 SLVAKAQSLP SDQPVGTFSP LATSDTSSPQ KSLRTAPAAG PPPGRSSPAG ENSP00000453858/1-681 SLVAKAQSLP SDQPVGTFSP LTTSDTSSPQ KSLRTAPATG QLPGRSSPAG ENSBTAP00000025396/1-681 SLVAKAQSLP SDQPVGPFSP LTASDTSSPQ KSLRAAPAAG APPGRSSPAG 351 400 bmy_00634T0/1-716 SPRTRHAQIS TSNLYLPQDP TVAKGALAGE ETGVVTHEQF KAALRMVVDQ BACU008538/1-675 SPRTRHAQIS TSNLYLPQDP TVAKGALAGE ETGVVTHEQF KAALRMVVDQ ENSTTRP00000000035/1-675 SPRTWHAQIS TSNLHLPQDP AVAKGALAGE ETGVVTHEQF KAALRMVVDQ ENSP00000453858/1-681 SPRTWHAQIS TSNLYLPQDP TVAKGALAGE DTGVVTHEQF KAALRMVVDQ ENSBTAP00000025396/1-681 SPRTRHAQIS TSNLYLPQDP AVAKGALAGE DTGVVTHEQF KAALRMVVDQ 401 450 bmy_00634T0/1-716 GDPRLLLDSY VKIGEGSTGI VCLAREKHSG RQVAVKMMDL RKQQRRELLF BACU008538/1-675 GDPRLLLDSY VKIGEGSTGI VCLAREKHSG RQVAVKMMDL RKQQRRELLF ENSTTRP00000000035/1-675 GDPRLLLDSY TKIGEGSTGI VCLAREKHSG RQVAVKMMDL RKQQRRELLF ENSP00000453858/1-681 GDPRLLLDSY VKIGEGSTGI VCLAREKHSG RQVAVKMMDL RKQQRRELLF ENSBTAP00000025396/1-681 GDPRLLLDSY LKIGEGSTGI VCLAREKHSG RQVAVKMMDL RKQQRRELLF 451 500 bmy_00634T0/1-716 NEVGGEGVAG HVGRAVMAEA GWTSGSRGSG EGARHSGVPS CPQVVIMRDY BACU008538/1-675 NE-------- ---------- ---------- ---------- ---VVIMRDY ENSTTRP00000000035/1-675 NE-------- ---------- ---------- ---------- ---VVIMRDY ENSP00000453858/1-681 NE-------- ---------- ---------- ---------- ---VVIMRDY ENSBTAP00000025396/1-681 NE-------- ---------- ---------- ---------- ---VVIMRDY 501 550 bmy_00634T0/1-716 QHLNVVEMYK SYLVGEELWV LMEFLQGGAL TDIISQVRLN EEQIATVCEA BACU008538/1-675 QHLNVVEMYK SYLVGEELWV LMEFLQGGAL TDIISQVRLN EEQIATVCEA ENSTTRP00000000035/1-675 QHLNVVEMYK SYLVGEELWV LMEFLQGGAL TDIISQVRLN EEQIATVCEA ENSP00000453858/1-681 QHFNVVEMYK SYLVGEELWV LMEFLQGGAL TDIVSQVRLN EEQIATVCEA ENSBTAP00000025396/1-681 QHLNVVEMYK SYLVGEELWV LMEFLQGGAL TDIVSQVRLN EEQIATVCEA 551 600 bmy_00634T0/1-716 VLQALAYLHA QGVIHRDIKS DSILLTLDGR VKLSDFGFCA QISKDVPKRK BACU008538/1-675 VLQALAYLHA QGVIHRDIKS DSILLTLDGR VKLSDFGFCA QISKDVPKRK ENSTTRP00000000035/1-675 VLQALAYLHA QGVIHRDIKS DSILLTLDGR VKLSDFGFCA QISKDVPKRK ENSP00000453858/1-681 VLQALAYLHA QGVIHRDIKS DSILLTLDGR VKLSDFGFCA QISKDVPKRK ENSBTAP00000025396/1-681 VLQALAYLHA QGVIHRDIKS DSILLTLDGR VKLSDFGFCA QISKDVPKRK 601 650 bmy_00634T0/1-716 SLVGTPYWMA PEVISRCLYA TEVDIWSLGI MVIEMVDGEP PYFSDSPVQA BACU008538/1-675 SLVGTPYWMA PEVISRCLYA TEVDIWSLGI MVIEMVDGEP PYFSDSPVQA ENSTTRP00000000035/1-675 SLVGTPYWMA PEVICRCLYA TEVDIWSLGI MVIEMVDGEP PYFSDSPVQA ENSP00000453858/1-681 SLVGTPYWMA PEVISRSLYA TEVDIWSLGI MVIEMVDGEP PYFSDSPVQA ENSBTAP00000025396/1-681 SLVGTPYWMA PEVISRSLYA TEVDIWSLGI MVIEMVDGEP PYFSDSPVQA 651 700 bmy_00634T0/1-716 MKRLRDSPPP KLKNTHKVSP VLRDFLERML VRDPQERATA QELLDHPFLL BACU008538/1-675 MKRLRDSPPP KLKNTHKVSP VLRDFLERML VRDPQERATA QELLDHPFLL ENSTTRP00000000035/1-675 MKRLRDSPPP KLKNSHKVSP VLRDFLEQML VRDPQERATA QELLDHPFLL ENSP00000453858/1-681 MKRLRDSPPP KLKNSHKVSP VLRDFLERML VRDPQERATA QELLDHPFLL ENSBTAP00000025396/1-681 MKRLRDSPPP KLKNSYKVSP VLRDFLDRML VRDPQERATA QELLDHPFLL 701 750 bmy_00634T0/1-716 QTGLPECLVP LIQLYHKQAS TC BACU008538/1-675 QTGLPECLVP LIQLYRKQAS TC ENSTTRP00000000035/1-675 QTGLPECLVP LIQLYRKQTS AC ENSP00000453858/1-681 QTGLPECLVP LIQLYRKQTS TC ENSBTAP00000025396/1-681 QTGLPECLVP LIQLYRKQTS TC