KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:26:03 2014 Check: 00 .. Name: ENSTTRP00000000875/1-504 Len: 722 Check: 4968 Weight: 1.00 Name: BACU008714/1-706 Len: 722 Check: 8739 Weight: 1.00 Name: bmy_14675T0/1-302 Len: 722 Check: 8485 Weight: 1.00 Name: ENSP00000451818/1-504 Len: 722 Check: 8162 Weight: 1.00 Name: ENSBTAP00000025405/1-504 Len: 722 Check: 8162 Weight: 1.00 // 1 50 ENSTTRP00000000875/1-504 MVLADLGRKI TSALRSLSNA TIINEEVLNA MLKEVCTALL EADVNIKLVK BACU008714/1-706 ---------- ------MLEE KAEKGKVLNA MLKEVCTALL EADVNIKLVK bmy_14675T0/1-302 ---------- ---------- ---------- ---------- ---------- ENSP00000451818/1-504 MVLADLGRKI TSALRSLSNA TIINEEVLNA MLKEVCTALL EADVNIKLVK ENSBTAP00000025405/1-504 MVLADLGRKI TSALRSLSNA TIINEEVLNA MLKEVCTALL EADVNIKLVK 51 100 ENSTTRP00000000875/1-504 QLRENVKSAI DLEEMASGLN KRKMIQHAVF KELVKLVDPG VKAWTPTKGK BACU008714/1-706 QLRENVKSAI DLEEMASGLN KRKMIQHAVF KELVKLVDPG VKAWTPTKGK bmy_14675T0/1-302 ---------- ---------- ---------- ---------- ---------- ENSP00000451818/1-504 QLRENVKSAI DLEEMASGLN KRKMIQHAVF KELVKLVDPG VKAWTPTKGK ENSBTAP00000025405/1-504 QLRENVKSAI DLEEMASGLN KRKMIQHAVF KELVKLVDPG VKAWTPTKGK 101 150 ENSTTRP00000000875/1-504 QNVIMFVGLQ GSGKTTTCSK LAYYYQRKGW KTCLICADTF RAGAFDQLKQ BACU008714/1-706 QNVIMFVGLQ GSGKTTTCSK LAYYYQRKGW KTCLICADTF RAGAFDQLKQ bmy_14675T0/1-302 ---------- ---------- ---------- ---------- ---------- ENSP00000451818/1-504 QNVIMFVGLQ GSGKTTTCSK LAYYYQRKGW KTCLICADTF RAGAFDQLKQ ENSBTAP00000025405/1-504 QNVIMFVGLQ GSGKTTTCSK LAYYYQRKGW KTCLICADTF RAGAFDQLKQ 151 200 ENSTTRP00000000875/1-504 NATKARIPFY GXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU008714/1-706 NATKARIPFY GSYTEMDPVI IASEGVEKFK NENFEIIIVD TSGRHKQEDS bmy_14675T0/1-302 --------ML NSYTEMDPVI IASEGVEKFK NENFEIIIVD TSGRHKQEDS ENSP00000451818/1-504 NATKARIPFY GSYTEMDPVI IASEGVEKFK NENFEIIIVD TSGRHKQEDS ENSBTAP00000025405/1-504 NATKARIPFY GSYTEMDPVI IASEGVEKFK NENFEIIIVD TSGRHKQEDS 201 250 ENSTTRP00000000875/1-504 XXXXXXXXXX XXQPDNIVYV MDASIGQACE AQAKAFKDKV DVASVIVTKL BACU008714/1-706 LFEEMLQVAN AIQPDNIVYV MDASIGQACE AQAKAFKDKV DVASVIVTKL bmy_14675T0/1-302 LFEEMLQVAN AIQPDNIVYV MDASIGQACE AQAKAFKDKV DVASVIVTKL ENSP00000451818/1-504 LFEEMLQVAN AIQPDNIVYV MDASIGQACE AQAKAFKDKV DVASVIVTKL ENSBTAP00000025405/1-504 LFEEMLQVAN AIQPDNIVYV MDASIGQACE AQAKAFKDKV DVASVIVTKL 251 300 ENSTTRP00000000875/1-504 DGHAKGGGAL SAVAATKSPI IFIGTGEHID DFEPFKTQPF ISKLLGMGDI BACU008714/1-706 DGHAKGGGAL SAVAATKSPI IFIGTGEHID DFEPFKTQPF ISKLLGMGDI bmy_14675T0/1-302 DGHAKGGGAL SAVAATKSPI IFI------- ---------- -----GMGDI ENSP00000451818/1-504 DGHAKGGGAL SAVAATKSPI IFIGTGEHID DFEPFKTQPF ISKLLGMGDI ENSBTAP00000025405/1-504 DGHAKGGGAL SAVAATKSPI IFIGTGEHID DFEPFKTQPF ISKLLGMGDI 301 350 ENSTTRP00000000875/1-504 EGLIDKVNEL KLDDNEALIE KLKHGQFTLR DMYEQFQNIM KMGPFSQILG BACU008714/1-706 EGLIDKVNEL KLDDNEALIE KLKHGQFTLR DMYEQFQNIM KMGPFSQILG bmy_14675T0/1-302 EGLIDKVNEL KLDDNEALIE KLKHGQFTLR DMYEQFQNIM KMGPFSQILG ENSP00000451818/1-504 EGLIDKVNEL KLDDNEALIE KLKHGQFTLR DMYEQFQNIM KMGPFSQILG ENSBTAP00000025405/1-504 EGLIDKVNEL KLDDNEALIE KLKHGQFTLR DMYEQFQNIM KMGPFSQILG 351 400 ENSTTRP00000000875/1-504 MIPGFGTDFM SKGNEQESMA RLKKLMTIMD SMNDQELDST DGAKVFSKQP BACU008714/1-706 MIPGFGTDFM SKGNEQESMA RLKKLMTIMD SMNDQELDST DGAKVFSKQP bmy_14675T0/1-302 MIPGFGTDFM SKGNEQD--- ---------- ---------T DGAKVFSKQP ENSP00000451818/1-504 MIPGFGTDFM SKGNEQESMA RLKKLMTIMD SMNDQELDST DGAKVFSKQP ENSBTAP00000025405/1-504 MIPGFGTDFM SKGNEQESMA RLKKLMTIMD SMNDQELDST DGAKVFSKQP 401 450 ENSTTRP00000000875/1-504 GRIQRVARGS GVSTRDVQEL LTQYTKFAQM VKKMGGIKGL FKGGDMSKNV BACU008714/1-706 GRIQRVARGS GVSTRDVQEL LTQYTKFAQM VKKMGGIKGL FKGGDMSKNV bmy_14675T0/1-302 GRIQRVARGS GVSTRDVQEL LTQYTKFAQM VKKMGGIKGL FKGGDMSKNV ENSP00000451818/1-504 GRIQRVARGS GVSTRDVQEL LTQYTKFAQM VKKMGGIKGL FKGGDMSKNV ENSBTAP00000025405/1-504 GRIQRVARGS GVSTRDVQEL LTQYTKFAQM VKKMGGIKGL FKGGDMSKNV 451 500 ENSTTRP00000000875/1-504 SQSQMAKLNQ QMAKMMDPRV LHHMGGM--- --------AG LQSM------ BACU008714/1-706 SQSQMAKLNQ QMAKMMDPRV LHHMAGSVRA WAGTRRMEAG LSAITLYLAS bmy_14675T0/1-302 SQSQMAKLNQ QMAKMMDPRV LHHMGGM--- --------AG LQSM------ ENSP00000451818/1-504 SQSQMAKLNQ QMAKMMDPRV LHHMGGM--- --------AG LQSM------ ENSBTAP00000025405/1-504 SQSQMAKLNQ QMAKMMDPRV LHHMGGM--- --------AG LQSM------ 501 550 ENSTTRP00000000875/1-504 ---------- ----MRQFQQ GAAGNMKGMM ---------- ------GFNN BACU008714/1-706 ASSPVVATTM DRKPVSLAEG GEAGAASGAA AAAPFRESAQ QMSNERGFEN bmy_14675T0/1-302 ---------- ----MRQFQQ GAAGNMKGMM ---------- ------GFNN ENSP00000451818/1-504 ---------- ----MRQFQQ GAAGNMKGMM ---------- ------GFNN ENSBTAP00000025405/1-504 ---------- ----MRQFQQ GAAGNMKGMM ---------- ------GFNN 551 600 ENSTTRP00000000875/1-504 M--------- ---------- ---------- ---------- ---------- BACU008714/1-706 VELGVIGKKK KVPRRVIHFV SGETMEEYST DEDEVDSLEK KDVLPTVDPT bmy_14675T0/1-302 M--------- ---------- ---------- ---------- ---------- ENSP00000451818/1-504 M--------- ---------- ---------- ---------- ---------- ENSBTAP00000025405/1-504 M--------- ---------- ---------- ---------- ---------- 601 650 ENSTTRP00000000875/1-504 ---------- ---------- ---------- ---------- ---------- BACU008714/1-706 KLTWGPYLWF YMLRAATSTL SVCDFLGEKI ASVLGISTPK YQYAIDEYYR bmy_14675T0/1-302 ---------- ---------- ---------- ---------- ---------- ENSP00000451818/1-504 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025405/1-504 ---------- ---------- ---------- ---------- ---------- 651 700 ENSTTRP00000000875/1-504 ---------- ---------- ---------- ---------- ---------- BACU008714/1-706 MKKEEEEEEE ENRMSEEAER QYQQNKLQAD SIVQSDQPET LVSSSFVNLN bmy_14675T0/1-302 ---------- ---------- ---------- ---------- ---------- ENSP00000451818/1-504 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025405/1-504 ---------- ---------- ---------- ---------- ---------- 701 750 ENSTTRP00000000875/1-504 ---------- ---------- -- BACU008714/1-706 FEMEGDCEVI MESKQNPVSV PP bmy_14675T0/1-302 ---------- ---------- -- ENSP00000451818/1-504 ---------- ---------- -- ENSBTAP00000025405/1-504 ---------- ---------- --