KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:26:10 2014 Check: 00 .. Name: ENSP00000203407/1-480 Len: 495 Check: 9176 Weight: 1.00 Name: ENSBTAP00000025422/1-480 Len: 495 Check: 1771 Weight: 1.00 Name: bmy_05980T0/1-495 Len: 495 Check: 3220 Weight: 1.00 Name: ENSTTRP00000016428/1-480 Len: 495 Check: 1897 Weight: 1.00 // 1 50 ENSP00000203407/1-480 --MAASVVCR AATAGAQVLL RARR------ -------SPA LLRTPALRST ENSBTAP00000025422/1-480 --MAASAVCR AAGAGTRVLL RTRR------ -------SPA LLRSSDLRGT bmy_05980T0/1-495 MRGAAQRPLE PEDGGFRGLP GGQRRDASAG AQPPLGEQPA LLRSPVLRGI ENSTTRP00000016428/1-480 --MAASAVCR AASAGTRVLV RSRR------ -------SPA LLRSPVLRGI 51 100 ENSP00000203407/1-480 ATFAQALQFV PETQVSLLDN GLRVASEQSS QPTCTVGVWI DVGSRFETEK ENSBTAP00000025422/1-480 ATYAQALQSV PETQVSQLDN GLRVASEQSS QPTCTVGVWI DAGSRYETEK bmy_05980T0/1-495 ATYAQALQSV PETQVSQLDN GLRVASEQSS QPTCTVGVWI DAGSRYETEK ENSTTRP00000016428/1-480 ATYAQALQSV PETQVSQLDN GLRVASEQSS QPTCTVGVWI DAGSRYETEK 101 150 ENSP00000203407/1-480 NNGAGYFLEH LAFKGTKNRP GSALEKEVES MGAHLNAYST REHTAYYIKA ENSBTAP00000025422/1-480 NNGAGYFVEH LAFKGTKNRP GNALEKEVES MGAHLNAYST REHTAYYIKA bmy_05980T0/1-495 NNGAGYFVEH LAFKGTKNRP GSALEKEVES MGAHLNAYST REHTAYYIKA ENSTTRP00000016428/1-480 NNGAGYFVEH LAFKGTKNRP GIALEKEVES MGAHLNAYST REHTAYYIKA 151 200 ENSP00000203407/1-480 LSKDLPKAVE LLGDIVQNCS LEDSQIEKER DVILREMQEN DASMRDVVFN ENSBTAP00000025422/1-480 LSKDLPKAVE LLADIVQNCS LEDSQIEKER DVILQELQEN DTSMRDVVFN bmy_05980T0/1-495 LSKDLPKAVE LLADIVQNCS LEDSQVEKER DVILQELQEN DASMRDVVFD ENSTTRP00000016428/1-480 LSKDLPKAVE LLADIVQNCS LEDSQVEKER DVILQELQEN DASMRDVVFD 201 250 ENSP00000203407/1-480 YLHATAFQGT PLAQAVEGPS ENVRKLSRAD LTEYLSTHYK APRMVLAAAG ENSBTAP00000025422/1-480 YLHATAFQGT PLAQSVEGPS ENVRKLSRAD LTEYLSRHYK APRMVLAAAG bmy_05980T0/1-495 YLHATAFQGT PLAQAVEGSS ENVRKLSRAD LTEYLSRHYK ASRMVLAAAG ENSTTRP00000016428/1-480 YLHATAFQGT PLAQAVEGSN ENVRKLSRAD LTEYLSRHYK ASRMVLAAAG 251 300 ENSP00000203407/1-480 GVEHQQLLDL AQKHLGGIPW TYAEDAVPTL TPCRFTGSEI RHRDDALPFA ENSBTAP00000025422/1-480 GLEHRQLLDL AQKHFSGLSG TYDEDAVPTL SPCRFTGSQI CHREDGLPLA bmy_05980T0/1-495 GVEHRQLLDL AQKHFCSLSG TYAEDAVPTL TPCRFTGSEI RHRDDALPLA ENSTTRP00000016428/1-480 GVEHRQLLDL AQKHFCSLSG TYTEDAVPTL TPCRFTGSEI RHRDDALPLA 301 350 ENSP00000203407/1-480 HVAIAVEGPG WASPDNVALQ VANAIIGHYD CTYGGGVHLS SPLASGAVAN ENSBTAP00000025422/1-480 HVAIAVEGPG WAHPDNVALQ VANAIIGHYD CTYGGGAHLS SPLASIAATN bmy_05980T0/1-495 HVAIAVEGPG WANPDNVALQ VANAIIGHYD CTYGGGTHLS SPLAAVAATK ENSTTRP00000016428/1-480 HVAIAVEGPG WANPDNVALQ VANAIIGHYD CTYGGGAYLS SPLAAVAATK 351 400 ENSP00000203407/1-480 KLCQSFQTFS ICYAETGLLG AHFVCDRMKI DDMMFVLQGQ WMRLCTSATE ENSBTAP00000025422/1-480 KLCQSFQTFN ICYADTGLLG AHFVCDHMSI DDMMFVLQGQ WMRLCTSATE bmy_05980T0/1-495 KLCQSFQTFN ICYAETGLLG AHFVCDHMSI DDMMFFLQGQ WMRLCTSATE ENSTTRP00000016428/1-480 KLCQSFQTFN ICYAETGLLG AHFVCDHMSI DDMMFFLQGQ WMRLCTSATE 401 450 ENSP00000203407/1-480 SEVARGKNIL RNALVSHLDG TTPVCEDIGR SLLTYGRRIP LAEWESRIAE ENSBTAP00000025422/1-480 SEVLRGKNLL RNALVSHLDG TTPVCEDIGR SLLTYGRRIP LAEWESRIAE bmy_05980T0/1-495 SEVVRGKNIL RNALVSHLDG TTPVCEDIGR SLLTYGRRIP LAEWESRIAE ENSTTRP00000016428/1-480 SEVVRGKNIL RNALVSHLIG TTPVCEDIGR SLLTYGRRIP LAEWESRIAE 451 500 ENSP00000203407/1-480 VDASVVREIC SKYIYDQCPA VAGYGPIEQL PDYNRIRSGM FWLRF ENSBTAP00000025422/1-480 VDARVVREVC SKYFYDQCPA VAGFGPIEQL PDYNRIRSGM FWLRF bmy_05980T0/1-495 VDASIVREVC SKYFYDQCPA VAGLGPIEQL PDYNRIRSGM FWLRF ENSTTRP00000016428/1-480 VNASILREVC SKYFYDQCPA VAGLGPIEQL PDYNRIRSGM FWLRF