KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:26:14 2014 Check: 00 .. Name: BACU014109/1-270 Len: 270 Check: 1608 Weight: 1.00 Name: bmy_04435T0/1-208 Len: 270 Check: 902 Weight: 1.00 Name: ENSP00000315702/1-225 Len: 270 Check: 3700 Weight: 1.00 Name: ENSTTRP00000003207/1-225 Len: 270 Check: 3700 Weight: 1.00 Name: ENSBTAP00000025447/1-225 Len: 270 Check: 3700 Weight: 1.00 // 1 50 BACU014109/1-270 MAGQAFRKFL PLFDRVLVER SAPEVVTKGG IMLPEKSQGK VLQAMVVAVG bmy_04435T0/1-208 --------MV MAEGTAVLRR NRPGTKAQDF YNWPDESFDE MDSTLAV--- ENSP00000315702/1-225 --------MV MAEGTAVLRR NRPGTKAQDF YNWPDESFDE MDSTLAV--- ENSTTRP00000003207/1-225 --------MV MAEGTAVLRR NRPGTKAQDF YNWPDESFDE MDSTLAV--- ENSBTAP00000025447/1-225 --------MV MAEGTAVLRR NRPGTKAQDF YNWPDESFDE MDSTLAV--- 51 100 BACU014109/1-270 SGSKGKGGEI QPVSVKVGDK VLLPEYGGTK VVLDDKYIQQ NIRADCSNID bmy_04435T0/1-208 ---------- ---------- ---------- ----QQYIQQ NIRADCSNID ENSP00000315702/1-225 ---------- ---------- ---------- ----QQYIQQ NIRADCSNID ENSTTRP00000003207/1-225 ---------- ---------- ---------- ----QQYIQQ NIRADCSNID ENSBTAP00000025447/1-225 ---------- ---------- ---------- ----QQYIQQ NIRADCSNID 101 150 BACU014109/1-270 KILEPPEGQD EGVWKYEHLR QFCLELNGLA VKLQSECHPD TCTQMTATEQ bmy_04435T0/1-208 KILEPPEGQD EGVWKYEHLR QFCLELNGLA VKLQSECHPD TCTQMTATEQ ENSP00000315702/1-225 KILEPPEGQD EGVWKYEHLR QFCLELNGLA VKLQSECHPD TCTQMTATEQ ENSTTRP00000003207/1-225 KILEPPEGQD EGVWKYEHLR QFCLELNGLA VKLQSECHPD TCTQMTATEQ ENSBTAP00000025447/1-225 KILEPPEGQD EGVWKYEHLR QFCLELNGLA VKLQSECHPD TCTQMTATEQ 151 200 BACU014109/1-270 WIFLCAAHKT PKECPAIDYT RHTLDGAACL LNSNKYFPSR VSIKESSVAK bmy_04435T0/1-208 WIFLCAAHKT PKECPAIDYT RHTLDGAACL LNSNKYFPS- ---------- ENSP00000315702/1-225 WIFLCAAHKT PKECPAIDYT RHTLDGAACL LNSNKYFPSR VSIKESSVAK ENSTTRP00000003207/1-225 WIFLCAAHKT PKECPAIDYT RHTLDGAACL LNSNKYFPSR VSIKESSVAK ENSBTAP00000025447/1-225 WIFLCAAHKT PKECPAIDYT RHTLDGAACL LNSNKYFPSR VSIKESSVAK 201 250 BACU014109/1-270 LGSVCRRIYR IFSHAYFHHR QIFDEYENET FLCHRFTKFV MKYNLMSKDN bmy_04435T0/1-208 ------RIYR IFSHAYFHHR QIFDEYENET FLCHRFTKFV MKYNLMSKDN ENSP00000315702/1-225 LGSVCRRIYR IFSHAYFHHR QIFDEYENET FLCHRFTKFV MKYNLMSKDN ENSTTRP00000003207/1-225 LGSVCRRIYR IFSHAYFHHR QIFDEYENET FLCHRFTKFV MKYNLMSKDN ENSBTAP00000025447/1-225 LGSVCRRIYR IFSHAYFHHR QIFDEYENET FLCHRFTKFV MKYNLMSKDN 251 300 BACU014109/1-270 LIVPILEEEV QNSVSGESEA bmy_04435T0/1-208 LIVPILEEEV QNSVSGESEA ENSP00000315702/1-225 LIVPILEEEV QNSVSGESEA ENSTTRP00000003207/1-225 LIVPILEEEV QNSVSGESEA ENSBTAP00000025447/1-225 LIVPILEEEV QNSVSGESEA