KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:26:15 2014 Check: 00 .. Name: ENSP00000353793/1-1129 Len: 1154 Check: 6439 Weight: 1.00 Name: ENSBTAP00000025453/1-1127 Len: 1154 Check: 7268 Weight: 1.00 Name: bmy_08100T0/1-1091 Len: 1154 Check: 4309 Weight: 1.00 Name: BACU015358/1-1056 Len: 1154 Check: 7102 Weight: 1.00 Name: ENSTTRP00000003111/1-1083 Len: 1154 Check: 6631 Weight: 1.00 // 1 50 ENSP00000353793/1-1129 MPATRKPMRY GHTEGHTEVC FDDSGSFIVT CGSDGDVRIW EDLDDDDPKF ENSBTAP00000025453/1-1127 MPATQKPMRY GHTEGHTDVC FDDSGSCIVT CGSDGDVRIW EDLDDDDPKS bmy_08100T0/1-1091 MPATQKPMRY GHTEGHTDVC FDDSGSCIVT CGSDGDVRIW EDLDDDDPKS BACU015358/1-1056 MPATQKPMRY GHTEGHTDVC FDDSGSCIVT CGSDGDVRIW EDLDDDDPKS ENSTTRP00000003111/1-1083 MPATKKPMRY GHTEGHTDVC FDDSGSCIVT CGSDGDVRIW EDLDDDDPKS 51 100 ENSP00000353793/1-1129 INVGEKAYSC ALKSGKLVTA VSNNTIQVHT FPEGVPDGIL TRFTTNANHV ENSBTAP00000025453/1-1127 INVGEKAYSC ALKNGKLVTA VSNNTIQVHT FPEGVPDGIL TRFTTNANHV bmy_08100T0/1-1091 INVGEKAYSC ALKNGKLVTA VSNNTVQVHT FPEGVPDGIL TRFTTNANHV BACU015358/1-1056 INVGEKAYSC ALKNGKLVTA VSNNTVQVHT FPEGIPDGIL TRFTTNANHV ENSTTRP00000003111/1-1083 INVGEKAYSC ALKNGKLVTA VSNNTVQVHT FPEGVPDGIL TRFTTNANHV 101 150 ENSP00000353793/1-1129 VFNGDGTKIA AGSSDFLVKI VDVMDSSQQK TFRGHDAPVL SLSFDPKDIF ENSBTAP00000025453/1-1127 VFNGDGTKIA AGSSDFLVKI VDVMDCSQQK TFRGHDAPVL SLSFDPKDIF bmy_08100T0/1-1091 IFNGDGAKIA AGSSDFLVKV VDVVDCSQQK TFRGHDAPVL SLSFDPKDIF BACU015358/1-1056 IFNGDGAKIA AGSSDFLVKV VDVVDCSQQK TFRGHDAPVL SLSFDPKDIF ENSTTRP00000003111/1-1083 IFNGDGAKIA AGSSDFLVKV VDVADCSQQK TFRGHDAPVL SLSFDPKDIF 151 200 ENSP00000353793/1-1129 L--------- ---------- ---ASASCDG SVRVWQISDQ TCAISWPLLQ ENSBTAP00000025453/1-1127 L--------- ---------- ---ASSSCDG SVKVWQISDQ TCPISWPLLQ bmy_08100T0/1-1091 V--------- ---------- ---ASASCDG SVKVWQISDQ TCAISWPLLQ BACU015358/1-1056 LLNQSPYSIM AVTIEKSIVL FLQASASCDG SVKVWQISDQ ---------- ENSTTRP00000003111/1-1083 L--------- ---------- ---ASASCDG SVKVWQISDQ TCAISWPLLQ 201 250 ENSP00000353793/1-1129 KCNDVINAKS ICRLAWQPKS GKLLAIPVEK SVKLYRRESW SHQFDLSDNF ENSBTAP00000025453/1-1127 KCNDVVNAKS ICRLAWQPKS GKLLAVPVEK SVKLYKRETW SNQFDLSDDV bmy_08100T0/1-1091 KCNDVINAKS ICRLAWQPKS GKLLAVPVEK SVKLYRRETW SNQFDLSDNF BACU015358/1-1056 ---------- ---------- --LLAVPVEK SVKLYRRETW SNQFDLSDNF ENSTTRP00000003111/1-1083 KCNDVINAKS ICRLAWQPKS GKLLAVPVEK SVKLYRRETW SNQFDLSDNF 251 300 ENSP00000353793/1-1129 ISQTLNIVTW SPCGQYLAAG SINGLIIVWN VETKDCMERV KHEKGYAICG ENSBTAP00000025453/1-1127 ISQTLNIVTW SPCGQYLAAG SINGLIIIWN VETKNCIERV KHEKGYAICG bmy_08100T0/1-1091 ISQTLNIVTW SPCGQYLAAG SINGLIIVWN VETKDCMERV KHEKGYAICG BACU015358/1-1056 ISQTLNIVTW SPCGQYLAAG SINGLIIVWN VETKDCMERV KHEKGYAICG ENSTTRP00000003111/1-1083 ISQTLNIVTW SPCGQYLAAG SINGLIIVWN VETKDCMERV KHEKGYAICG 301 350 ENSP00000353793/1-1129 LAWHPTCGRI SYTDAEGNLG LLENVCDPSG KTSSSKVSSR VEKDYNDLFD ENSBTAP00000025453/1-1127 LSWHPTCGQI AYTDAEGNLG LLENVCDPSG KMSNRKVSSR VEKDYNDLFD bmy_08100T0/1-1091 LSWHPTCGQI AYTDAEGNLG VLEN------ ------VSSR VEKDYNDLFD BACU015358/1-1056 LSWHPTCGQI AYTDAEGNLG VLENVCDPSG KMSSSKVSSR VEKDYNDLFD ENSTTRP00000003111/1-1083 LSWHPTCGQI AYTDAEGNLG VLENVCDPSG KMSSSKVSSR VEKDYNDLFD 351 400 ENSP00000353793/1-1129 GDDMSNAGDF LNDNAVEIPS FSKGIINDDE DDEDLMMASG RPRQRSHILE ENSBTAP00000025453/1-1127 GDDTSNVGDC LNDSAVKTHS FSKGIVNDEE DDDDLMLASG RPRQRSHILE bmy_08100T0/1-1091 GEDTNSAGDF LNDNAVETRS FSKGIINDGE DDDDLMLASG RPRQRSHILE BACU015358/1-1056 GEDTSSAGDF LNDNAVETRS FSKGIINDEE DDDDLMLASG RPRQRSHILE ENSTTRP00000003111/1-1083 GEDASSAGDF LNDNAVETRS FSKRIINDEE DDDDLMLASG RPRQRSHILE 401 450 ENSP00000353793/1-1129 DDENSVDISM LKTGSSLLKE EEEDGQEGSI HNLPLVTSQR PFYDGPMPTP ENSBTAP00000025453/1-1127 DDENSVDVTM LKIGSSLFK- EEEDDQGGSI HNLPVVTSQR PFYDGPMPTP bmy_08100T0/1-1091 DDENSVDVTM IKTGSSFLKE EEEDDQAGSI HNLPVVTSQR PFYDGPMPTP BACU015358/1-1056 DDENSVDVTM IKTGSSFLKE EEEDDQAGSI HNLPVVTSQR PFYDGPMPTP ENSTTRP00000003111/1-1083 DDENSVDVTM IKTGSGFLKE EEEEDQAGSI HNLPVVTSQR PFYDGPMPTP 451 500 ENSP00000353793/1-1129 RQKPFQSGST PLHLTHRFMV WNSIGIIRCY NDEQDNAIDV EFHDTSIHHA ENSBTAP00000025453/1-1127 RQKPFQSGST PLHLTHRFMV WNSIGIIRCY NDEQDNAIDV EFHDTSIHHA bmy_08100T0/1-1091 RQRPFQSGST PLHLTHRFMV WNSIGIIRCY NDEQDNAIDV EFHDTSIHHA BACU015358/1-1056 RQRPFQSGST PLHLTHRFMV WNSIGIIRCY NDEQDNAIDV EFHDTSIHHA ENSTTRP00000003111/1-1083 RQKPFQSGST PLHLTHRFMV WNSIGIIRCY NDEQDNAIDV EFHDTSIHHA 501 550 ENSP00000353793/1-1129 THLSNTLNYT IADLSHEAIL LACESTDELA SKLHCLHFSS WDSSKEWIID ENSBTAP00000025453/1-1127 THLLNTFNYT VADLSHEAVL LACESTDELA SKLHCLHLSS WDSSKEWIVD bmy_08100T0/1-1091 THLSNTLNYT VADLSHEAVL LACESTDELA SKLHCLHFSS WDSSKEWIVD BACU015358/1-1056 THLSNTLNYT VADLSHEAVL LACESTDELA SKLHCLHFSS WDSSKEWIVD ENSTTRP00000003111/1-1083 THLANTLNYT VADLSHEAVL LACESTDELA SKLHCLHFSS WDSSKEWIVD 551 600 ENSP00000353793/1-1129 LPQNEDIEAI CLGQGWAAAA TSALLLRLFT IGGVQKEVFS LAGPVVSMAG ENSBTAP00000025453/1-1127 MPPNEDIEAI CLGQGWAAAA TSSLLLRLFT IGGVQKEVFS LPGPIVSMAG bmy_08100T0/1-1091 MPQNENIEAI CLGQGWAAAA TSALLLRLFT IGGVQKEVFS LPGPVVSVAG BACU015358/1-1056 MPQNENIEAI CLGQGWAAAA TSALLLRLFT IGGVQKEVFS LPGPVVSVAG ENSTTRP00000003111/1-1083 MPQNENIEAI CLGQGWAAAA TSALLLRLFT IGGVQKEVFS LPGPVVSVAG 601 650 ENSP00000353793/1-1129 HGEQLFIVYH RGTGFDGDQC LGVQLLELGK KKKQILHGDP LPLTRKSYLA ENSBTAP00000025453/1-1127 HGEQLVIVYH RGTGFDGDQC LGVQLLELGK KKKQILHGDP LPLTRKSYLV bmy_08100T0/1-1091 HGEQLVIVYH RGTGFDGDQC LGVQLLELGK KKKQILHGDP LPLTRKSYLV BACU015358/1-1056 HGEQLVIVYH RGT------- ---------- ---------- ---------- ENSTTRP00000003111/1-1083 HGEQLVIVYH RGTGFDGDQC LGVQLLELGK KKKQILHGDP LPLTRKSYLV 651 700 ENSP00000353793/1-1129 WIGFSAEGTP CYVDSEGIVR MLNRGLGNTW TPICNTREHC KGKSDHYWVV ENSBTAP00000025453/1-1127 WVGFSAEGTP CYVDSEGIVR MLNRGLGHTW TPVCNTREHC KGKSDHYWVV bmy_08100T0/1-1091 PHFMWIQKAL FECLTEDLVI ---HGL---- --LYVTQENT A--------- BACU015358/1-1056 ---------P FYVDSEGIVR MLNRGLGHTW TPVCNTREHC KGKSDHYWVV ENSTTRP00000003111/1-1083 WLGFSAEGTP FYVDSEGIVR MLNRGLGHTW TPVCNTREHC KGKSDHYWVV 701 750 ENSP00000353793/1-1129 GIHENPQQLR CIPCKGSRFP PTLPRPAVAI LSFKLPYCQI ATEKGQMEEQ ENSBTAP00000025453/1-1127 GIHENPQQLR CIPCKGSRFP PTLPRPAVAV LSFKLPYCQT ATEKGQMEEQ bmy_08100T0/1-1091 --KENLITTG CIPCKGSRFP PTLPRPAVAV LSFKLPYCQT ATEKGQMEEQ BACU015358/1-1056 GIHENPQQLR CIPCKGSRFP PTLPRPAVAV LSFKLPYCQT ATEKGQMEEQ ENSTTRP00000003111/1-1083 GIHENPQQLR CIPCKGSRFP PT-PRPAVAV LPFKLPYCQT ATEKGQMEEQ 751 800 ENSP00000353793/1-1129 FWRSVIFHNH LDYLAKNGYE YEESTKNQAT KEQQELLMKM LALSCKLERE ENSBTAP00000025453/1-1127 YWRSVIFHNH LDYLAKNGYE YEESTKNQAT KEQQELLLKM LALSCKLERE bmy_08100T0/1-1091 YWRSVTFHNH LDYLAKNGYE YEESTKNQAI KEQQELLMKM LALSCKLERE BACU015358/1-1056 YWRSVTFHNH LDYLAKNGYE YEESTKNQAI KEQQELLMKM LALSCKLERE ENSTTRP00000003111/1-1083 YWRSVMFHNH LDYLAKNGYE YEASTKNQAI KEQQELLMKM LALSCKLERE 801 850 ENSP00000353793/1-1129 FRCVELADLM TQNAVNLAIK YASRSRKLIL AQKLSELAVE KAAELTATQV ENSBTAP00000025453/1-1127 FRCVELAGLM TQNAVNLAIK YASRSRRLIL AQRLGELAVE KAAELAATQA bmy_08100T0/1-1091 FRCVELADLM TQNAVNLAIK YASRSRRLIL AQRLSELAVE KAAESAATHA BACU015358/1-1056 FRCVELADLM TQNAVNLAIK YASRSRRLIL AQRLSELAVE KAAESAATQA ENSTTRP00000003111/1-1083 FRCVELADLM TQNAVNLAIK YAARSRRLIL AQRLSELAVE KAAESAATQA 851 900 ENSP00000353793/1-1129 -EEEEEEEDF RKKLNAGYSN TATEWSQPRF RNQVEEDAED SGEADD-EEK ENSBTAP00000025453/1-1127 --EEEEEEDF RKKLNVGYSN TSTEWSQPRL RNQVEEDTED NGEADNTEEN bmy_08100T0/1-1091 EEEEEEEEDF RKKLNAGYSN TPTEWSQPRL RNQVEEDSED TGEADDIEEK BACU015358/1-1056 EEEEEEEEDF RKKLNAGYSN TPTEWSQPRL RNQVEEDSED TGEADDIEEK ENSTTRP00000003111/1-1083 EEEEEEEEDF KKKLNAGYSN TPTEWSQPRL RNQVEEDSED TGEADDIEEK 901 950 ENSP00000353793/1-1129 PEIHKPGQNS FSKSTNSSDV SA-KSGAVTF SSQGRVNPFK VSASSKEPAM ENSBTAP00000025453/1-1127 TEIHKHGQNP FFKSADSSDM PALKSGAVTS SSQGRINPFK VSGNSKEPAI bmy_08100T0/1-1091 PEIHKHGENP FFKSVNSSDM PAIKSGAVTS SNQGRINPFK VSGNSKEPSI BACU015358/1-1056 PEIHKH---- ---------- -----GAVTS SNQGRINPFK VSGNSKEPSI ENSTTRP00000003111/1-1083 PEIHKHGENP FFKSVNSSDM PAIKSGAVTS SNQGRINPFK VSGNSKEPSI 951 1000 ENSP00000353793/1-1129 SMNSARSTNI LDNMGKSSKK STALSRTTNN EKSPIIKPLI PKPKPKQASA ENSBTAP00000025453/1-1127 SVSSGRSTNI LDTMNKSSKK STALNRATDN EKSPVIKPLI PKPKPKQASA bmy_08100T0/1-1091 SVNSVRSTNI LDNMNKSSKK STALHRATNY EKSPVIKPLV PKPKSKQASA BACU015358/1-1056 SVNSVRSTNI LDNMNKSSKK STALNRATNY EKSPVIKPLV PKPKSKQASA ENSTTRP00000003111/1-1083 SVNSVRSTNI LDNMNKSSKK STALNRATNY EKSPVIKPLV PKPKSKQASA 1001 1050 ENSP00000353793/1-1129 ASYFQKRNSQ TNKTEEVKEE NLKNVLSETP AICPPQNTEN QRPKTGFQMW ENSBTAP00000025453/1-1127 ASFFQKRTSQ ADRTEEVKEE NPKNSSSETP AVC-PQNTEN QRPKTGFQMW bmy_08100T0/1-1091 ASFFRKRTSQ ADRTEEVKEE NPKNPSSETP AMC-PQNTEN QRPKTGFQMW BACU015358/1-1056 ASFFQKRTSQ ADRTEEVKEE NPKNPSPETP AMC-PQNTEN QRPKTGFQMW ENSTTRP00000003111/1-1083 ASFFWKRTSQ ADRTEEVKEE NPKNPSSETP AMC-PQNTEN Q--------- 1051 1100 ENSP00000353793/1-1129 LEENRSNILS DNPDFSDEAD IIKEGMIRFR VLSTEERKVW ANKAKGETAS ENSBTAP00000025453/1-1127 LEENRSNILS DNPDFSDEAD IIKEGMVRFK VLSSEERKAW AARAKGGTAS bmy_08100T0/1-1091 LEENRCNILS DNPDFSDEAD IIKEGMVRFR --------AW AAKAKGGTAS BACU015358/1-1056 LEENRCNILS DNPDFSDEAD IIKEGMVRFR VLSTEERKAW AAKAKGGTAS ENSTTRP00000003111/1-1083 ---------- ---------- ---------- --------AW AAKAKGGSAS 1101 1150 ENSP00000353793/1-1129 EGTEAKKRKR VVDESDETEN QEEKAKENLN LSKKQKPLDF STNQKLSAFA ENSBTAP00000025453/1-1127 DGAEEKKRKR VVDESQETEN QEEKMK-NLN LPKKQKPLDL STNQKLSAFA bmy_08100T0/1-1091 DGAEEKKRKR VVDDSHETEN QKERTKENLN LPKKQKPLDL STNQKLSAFA BACU015358/1-1056 DGAEEKKRKR VVEDSHETEN QKERTKENLN LPKKQKPLDL STNQKLSAFA ENSTTRP00000003111/1-1083 DGAEEKKRKR VVDDSHETEN QKEKTKENLN LPKKQKPLDL STNQKLSAFA 1151 1200 ENSP00000353793/1-1129 FKQE ENSBTAP00000025453/1-1127 FKQE bmy_08100T0/1-1091 FNQE BACU015358/1-1056 FNQE ENSTTRP00000003111/1-1083 FNQE