KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:26:15 2014 Check: 00 .. Name: ENSP00000262352/1-524 Len: 525 Check: 656 Weight: 1.00 Name: bmy_09761T0/1-426 Len: 525 Check: 7798 Weight: 1.00 Name: ENSBTAP00000025456/1-524 Len: 525 Check: 4785 Weight: 1.00 Name: BACU018389/1-445 Len: 525 Check: 1208 Weight: 1.00 Name: ENSTTRP00000000610/1-446 Len: 525 Check: 3033 Weight: 1.00 // 1 50 ENSP00000262352/1-524 MGKPARKGCE WKRFLKNNWV LLSTVAAV-V LGITTGVLVR EHSNLSTLEK bmy_09761T0/1-426 MGNKA----- ---------- ---------- ---------- ---------- ENSBTAP00000025456/1-524 MGKPARKGCD WKRFLRNNWL LLSTVVAV-V LGIVIGVLVR EYSKLSNLEK BACU018389/1-445 ---------- -----KNSML FLSSFQFLFF LGIAIGVLVR EYSKFSNLEK ENSTTRP00000000610/1-446 MGKPAKKGCD WKRFLRNNWL LLSTVAAV-V LGIAIGVLVR EYSKLSNLEK 51 100 ENSP00000262352/1-524 FYFAFPGEIL MRMLKLIILP LIISSMITGV AALDSNVSGK IGLRAVVYYF bmy_09761T0/1-426 ---------- --------LP -------ESV AALDSNISGK IGLRAVVYYF ENSBTAP00000025456/1-524 FYFSFPGEIL MRMLKLVILP LIVSSMITGV ATLDSNVSGK IGLRAVVYYF BACU018389/1-445 FYFSFPGEIL MRMLKLIVLP LIISSMITGV AALDSNISGK IGLRAVVYYF ENSTTRP00000000610/1-446 FYFSFPGEIL MRMLKLIVLP LILSSMITGV AALDSNISGK IGLRAVVYYF 101 150 ENSP00000262352/1-524 CTTLIAVILG IVLVVSIKPG VTQKVGEIAR TGSTPEVSTV DAMLDLIRNM bmy_09761T0/1-426 CTTVIAVILD -GKVIKVAAE VPTEACRFGW TSGSPS---- -------QNM ENSBTAP00000025456/1-524 CTTLIAVILG IVLVVSIKPG VTQKVNEIDR TGNTPEVSTV DAMLDLIRNM BACU018389/1-445 CTTVIAVILG IVLVVSIKPG VTQNVNEIDR TGSSPEVSSV DAMLDLIRNM ENSTTRP00000000610/1-446 CTTVIAVILG IVLVVSIKPG VTQKVNEIDR TGSSPEVSSV DAMLDLIRNM 151 200 ENSP00000262352/1-524 FPENLVQACF QQYKTKREEV KPPSDPEMNM TEESFTAVMT TAISKNKTKE bmy_09761T0/1-426 FPENLVQACF QQYKTTREEV KRPDEPGTNR TEASVTAIMT TAISKNKTKE ENSBTAP00000025456/1-524 FPENLVQACF QQYKTTREEV ELSEEPGTNS TEATVTAIMT TAISKNKTKE BACU018389/1-445 FPENLVQACF QQYKTTREEV KRPDEPGTNR TEASVTAVMT TAISKNKTKE ENSTTRP00000000610/1-446 FPENLVQACF QQYKTTREEV RRPDEPGTNR TEVSVTAIMT TATSKNRTKE 201 250 ENSP00000262352/1-524 YKIVGMYSDG INVLGLIVFC LVFGLVIGKM GEKGQILVDF FNALSDATMK bmy_09761T0/1-426 YKVIGMYSDG INVLGLIVFC LVFGIVIGKM GERGQILVDF FNALSDATMK ENSBTAP00000025456/1-524 YKVVGMYSDG INVLGLIVFC LVFGIVIGKM GERGQILVDF FNALSDATMK BACU018389/1-445 YKVIGMYSDG INVLGLIVFC LVFGIVIGKM GERGQILVDF FNALSDATMK ENSTTRP00000000610/1-446 YKVIGMYSDG INVLGLIVFC LVFGIVIGKM GERGQILVDF FNALSDATMK 251 300 ENSP00000262352/1-524 IVQIIMCYMP LGILFLIAGK IIEVEDWEIF RKLGLYMATV LTGLAIHSIV bmy_09761T0/1-426 IVQIIMCYMP VGILFLIAGK IIEVEDWEIF RKLGLYMATV L--------- ENSBTAP00000025456/1-524 IVQIIMCYMP IGILFLIAGK IIEVEDWEIF RKLGLYMATV LSGLAIHSIV BACU018389/1-445 IVQIIMCYMP VGILFLIAGK IIEVEDWEIF RKLGLYMATV LSGLAIHSIV ENSTTRP00000000610/1-446 IVQIIMCYMP VGILFLIAGK IIEVEDWEIF RKLGLYMATV LSGLAIHSIV 301 350 ENSP00000262352/1-524 ILPLIYFIVV RKNPFRFAMG MAQALLTALM ISSSSATLPV TFRCAEENNQ bmy_09761T0/1-426 --------IV RKNPFRFAMG MAQALLTAVM ISSSSATLPV TFRCAEEKNR ENSBTAP00000025456/1-524 ILPLIYFIIV RKNPFQFAMG MAQALLTALM ISSSSATLPV TFRCAEEKNR BACU018389/1-445 ILPLIYFIVV RKNPFRFAMG MAQALLTAVM ISS------- ---------- ENSTTRP00000000610/1-446 ILPLLYFLIV RKNPFRFAMG I--------- ---------- ---------- 351 400 ENSP00000262352/1-524 VDKRITRFVL PVGATINMDG TALYEAVAAV FIAQLNDLDL GIGQIITISI bmy_09761T0/1-426 VDKRITRFVL PVGATINMDG TALYEAVAAV FIAQLNDLDL SIGQIVTISV ENSBTAP00000025456/1-524 VDKRITRFVL PVGATINMDG TALYEAVAAV FIAQLNDLDL SVGQIITISV BACU018389/1-445 ---------- ---------- ---------- ---------- --------SV ENSTTRP00000000610/1-446 ---------- ---------- ---------- ---------- ---------V 401 450 ENSP00000262352/1-524 TATSASIGAA GVPQAGLVTM VIVLSAVGLP AEDVTLIIAV DWLLDRFRTM bmy_09761T0/1-426 TATAASIGAA GVPQAGLVTM VIVLSAVGLP TEDVTLIIAV DWLLDRFRTM ENSBTAP00000025456/1-524 TATAASIGAA GVPQAGLVTM VIVLSAVGLP AEDVTLIIAV DWLLDRFRTM BACU018389/1-445 TATAASIGAA GVPQAGLVTM VIVLSAVGLP TEDVTLIIAV DWLLDRFRTM ENSTTRP00000000610/1-446 TATAASIGAA GVPQAGLVTM VIVLSAVGLP AEDVTLIIAV DWLLDRFRTM 451 500 ENSP00000262352/1-524 VNVLGDAFGT GIVEKLSKKE LEQMDVSSEV NIVNPFALES TILDNEDSDT bmy_09761T0/1-426 VNVLGDAFGT GIVEKLSKKE LEHVDVSSEV NIVNPFALES TTLDNEDLDA ENSBTAP00000025456/1-524 VNVLGDAFGT GIVEKLSKKE LEQMDVSSEV NIVNPFTLES TALDNEDSDT BACU018389/1-445 VNVLGDAFGT GIVEKLSKKE LEQMDVSSEV NIVNPFALES TTLDNEDLDA ENSTTRP00000000610/1-446 VNVLGDAFGT GIVEKLSKKE LEQMDVSSEV NIVNPFALES TTLDSEDLDT 501 550 ENSP00000262352/1-524 KKSYVNGGFA VDKSDTISFT QTSQF bmy_09761T0/1-426 KKSYVNGGFA VDKSDTISFT QTSQF ENSBTAP00000025456/1-524 KKSYVNGGFA VDKSDTISFT QTSQF BACU018389/1-445 KKSYVNGGFA VDKSDTISFT QTSQF ENSTTRP00000000610/1-446 KKSYVNGGFA VDKSDTISFT QTSQF