KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:26:16 2014 Check: 00 .. Name: ENSP00000306477/1-543 Len: 582 Check: 9419 Weight: 1.00 Name: ENSBTAP00000025464/1-525 Len: 582 Check: 4433 Weight: 1.00 Name: ENSTTRP00000013673/1-572 Len: 582 Check: 4609 Weight: 1.00 Name: bmy_19902T0/1-535 Len: 582 Check: 1247 Weight: 1.00 Name: BACU020209/1-536 Len: 582 Check: 4752 Weight: 1.00 // 1 50 ENSP00000306477/1-543 ---------- ---------- ---------- --MAHAHIQG GRRAKSRFVV ENSBTAP00000025464/1-525 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013673/1-572 AGGGGLCRAG ERSNPEACRL VHHPEPFRDC VRRVVLTRSP GGRARGLLMV bmy_19902T0/1-535 ---------- ---------- ---------- ---MPILGEK RHTEVSLLMV BACU020209/1-536 ---------- ---------- ---------- ---------- ----RSRLMV 51 100 ENSP00000306477/1-543 CIMSGARSKL ALFLCGCYVV AL--GAHTGE ESVADHHEAE YYVAAVYEHP ENSBTAP00000025464/1-525 --MSRAGRQL ALLLCSCCVA VAIPGGLAEE GCPAEPHQAS RYVAAVYEHQ ENSTTRP00000013673/1-572 CIMSGAGRQL ALLLCGCCVA AL--GAQAEE RCPAERHQAA QYVAAVYEHR bmy_19902T0/1-535 CIMSGASRQL ALFLCGCCVA AL--GVQAEE RCPAERHQAA QYVAAVYEHR BACU020209/1-536 CIMSGASRQL ALFLCGCCVA AL--GVQAEE RRPAERHQAA QYVAAVYEHR 101 150 ENSP00000306477/1-543 SILSLNPLAL ISRQEALELM NQNLDIYEQQ VMTAAQK--- --DVQIIVFP ENSBTAP00000025464/1-525 SFLSPDPLAL TSREQALELM HRNLDVYEQQ VTTAARK--- --GAQIIVFP ENSTTRP00000013673/1-572 SILSPNPLAL TSRKQALELM NQNLDIYEQQ VTIAAQK--- --GVQIIVFP bmy_19902T0/1-535 SILSPNPLAL TSREQALELM NQNLDIYEQQ ---------- --GVQIIVFP BACU020209/1-536 SILSPNPLAL TSREQALELM SQNLDIYEEQ VTIAAQKARS APGVQIIVFP 151 200 ENSP00000306477/1-543 EDGIHGFNFT RTSIYPFLDF MPSPQVVRWN PCLEPHRFND TEVLQRLSCM ENSBTAP00000025464/1-525 EDGIHGFNFT RTSIYPFLDF MPSPRSVRWN PCLEPHRFND TEVLQRLSCM ENSTTRP00000013673/1-572 EDGIHGFNFT RTSIYPFLDF LPPPYLVRWN PCLEPHRFHD TEVLQRLSCM bmy_19902T0/1-535 EDGIHGFNFT RTSIYPFLDF MPSPHLVRWN PCLEPHRFND TEVLQRLSCM BACU020209/1-536 EDGIHGFNFT RTSIYPFLDF MPSPHLVRWN PCLEPHRFND TEVLQRLSCM 201 250 ENSP00000306477/1-543 AIRGDMFLVA NLGTKEPCHS SDPRCPKDGR YQFNTNVVFS NNGTLVDRYR ENSBTAP00000025464/1-525 AMKGEMFLVA NLGTKQPCHS SDPGCPSDGR YQFNTNVVFS SNGTLVDRYR ENSTTRP00000013673/1-572 AVKGEMFLVA NLGTKQPCHS SDPGCPNDGR YQYNTNVVFS SNGTLVDSYR bmy_19902T0/1-535 AVKGEMFLVA NLGTKQPCHS SDPGCPNDGR YQYNTNVVFS SNGTLVDSYR BACU020209/1-536 AVKGEMFLVA NLGTKQPCHS SDPGCPNDGR YQYNTNVVFS SNGTLVDSYR 251 300 ENSP00000306477/1-543 KHNLYFEAAF DVPLKVDLIT FDTPFAGRFG IFTCFDILFF DPAIRVLRDY ENSBTAP00000025464/1-525 KHNLYFEAAF DTPLEVDHTV FDTPFAGKFG VFTCFDILFF DPAVRLLQDS ENSTTRP00000013673/1-572 KQNLYFEAAF NTPLEVDRIT FDTPFAGKFG IFTCFXXXXX XXXXXXXXXX bmy_19902T0/1-535 KQNLYFEAAF NTPLEVDRIT FDTPFAGKFG IFTCFDILFF DPAVRLLRDS BACU020209/1-536 KQNLYFEAAF NTPLEVDRIT FDTHFAGKFG IFTCFDILFF DPAVRLLIDS 301 350 ENSP00000306477/1-543 KVKHVVYPTA WMNQLPLLAA IEIQKAFAVA FGINVLAANV HHPVLGMTGS ENSBTAP00000025464/1-525 EVKHVVYPTA WMNQLPLLAA IQIQRGFAIA FGINLLAANI HHPSLGMTGS ENSTTRP00000013673/1-572 XXXXXXXXXX XXXXXXXXXX XQIQKGFAI- FGVNFLAANM HH-SLGMTGS bmy_19902T0/1-535 EVKHVVYPTA WMNQLPLLAA IQIQRGFAIT FGINFLAANI HHPSLGMTGS BACU020209/1-536 EVKHVVYPTA WMNQLPLLAA IQIQRGFAIT FGVNFLAANI HHPSLGMTGS 351 400 ENSP00000306477/1-543 GIHTPLESFW YHDMENPKSH LIIAQVAKNP VGLIGAENAT GETDPSHSKF ENSBTAP00000025464/1-525 GIHTPLKSFW HHSMDSPEGH LIIAEVARNP PGLISAGNAT GKTDPFHRKF ENSTTRP00000013673/1-572 GIHAPLKSFW HHDMESPEGH -IIAQVAKNP QGLVGTGNAT GKMDPSHSKF bmy_19902T0/1-535 GIHAPLKSFW HHDMESPEGH LIIAQVAKNP QGLIGTGNAT GKMDPSHSKF BACU020209/1-536 GIHAPLKSFW HHDMESPEGH LIIAQVAKNP QGLIGTGNAT GKMDPSHSKF 401 450 ENSP00000306477/1-543 LKILSGDPYC EKDAQEVHCD EATKWNVNAP PTFHSEMMYD NFTLVPVWGK ENSBTAP00000025464/1-525 LQLLAGDPYS EKDAQDVHCD AAPKSTTNAS PTFNSEMMYD NFTLVPVWGR ENSTTRP00000013673/1-572 LKILAGDPYS EKDAQDVHCD GAPKWNTDAP PTFHSEMMYD NFTLVPVWGK bmy_19902T0/1-535 LKILAGDPYS EKDAQDVHCD GAPKWNTNAP PTFNSEMMYD NFTLVPVWGK BACU020209/1-536 LKILAGDPYS QKDAQDVHCD GAPKWNTNAP PTFNSEMMYD NFTLVPVWGK 451 500 ENSP00000306477/1-543 EGYLHVCSNG LCCYLLYERP TLSKELYALG VFDGLHTVHG TYYIQVCALV ENSBTAP00000025464/1-525 DGHVHVCAHG LCCHLLYQRP TVSQELYALG VFDGLHTVHG TYYVQVCALV ENSTTRP00000013673/1-572 EGYLQVCANS LCCHLLYQRP TLSKELYALG VFDGLHTVHG TYYVQVCALV bmy_19902T0/1-535 EGYLRVCANG LCCHLLYQRP TLSKELYALG VFDGLHTVHG TYYVQVCALV BACU020209/1-536 EGYLRVCANG LCCHVLYQRP TLSKELYALG VFDGLHTVHG TYYVQVCALV 501 550 ENSP00000306477/1-543 RCGGLGFDTC GQEITEATGI FEFHLWGNFS TSYIFPLFLT SGMTLEVPDQ ENSBTAP00000025464/1-525 KCGGLGFDTC GQEITEAMGM FEFHLWGNFS TSYIFPMLLT SGMMLETPDQ ENSTTRP00000013673/1-572 KCGGLGFETC GQEVTEAAGI FEFHLWGNFS TSYIFPMLLT SGMTLETPDQ bmy_19902T0/1-535 KCGGLGFETC GQEVTEAAGI FEFHLWGNFS TSYIFPMLLT SGMTLETPDQ BACU020209/1-536 KCGGLGFETC GQEVTEAAGI FEFHLWGNFS TSYIFPMLLT SGMTLETPDQ 551 600 ENSP00000306477/1-543 LGWENDHYFL RKSRLSSGLV TAALYGRLYE RD ENSBTAP00000025464/1-525 LGWESDQYFL KKRGLSSGLV TAALYGRLYE RD ENSTTRP00000013673/1-572 LGWENDHYFL RKSELSSGLV TAALYGRLYE KD bmy_19902T0/1-535 LGWENDHYFL RKSGLSSGLV TAALYGRLYE KD BACU020209/1-536 LGWENDHYFL RKSGLSSGLV TAALYGRLYE KD