KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:26:18 2014 Check: 00 .. Name: bmy_01051T0/1-573 Len: 798 Check: 5966 Weight: 1.00 Name: BACU014527/1-774 Len: 798 Check: 4050 Weight: 1.00 Name: ENSTTRP00000015641/1-776 Len: 798 Check: 3442 Weight: 1.00 Name: ENSP00000264712/1-793 Len: 798 Check: 5903 Weight: 1.00 Name: ENSBTAP00000025475/1-792 Len: 798 Check: 3685 Weight: 1.00 // 1 50 bmy_01051T0/1-573 MASKTKASEA LKVVARCRPL SRKEEASGHE QILTMDVKLG QVTLRNPRAA BACU014527/1-774 MASKTKASEA LKVVARCRPL SRKEEASGHE QILTMDVKLG QVTLRNPRAA ENSTTRP00000015641/1-776 MASKTKASEA -KVVARCRPL SRKEEASGHE QILTMDVKLG QVTLRNPRAA ENSP00000264712/1-793 MASKTKASEA LKVVARCRPL SRKEEAAGHE QILTMDVKLG QVTLRNPRAA ENSBTAP00000025475/1-792 MASKTKASEA LKVVARCRPL SRKEEAAGHE QILTMDVKLG QVTLRNPRAA 51 100 bmy_01051T0/1-573 LGELPKTFTF DAVYDASSKQ ADLYDETVRP LIDSVLQGFN GTVFAYGQTG BACU014527/1-774 LGELPKTFTF DAVYDASSKQ ADLYDETVRP LVDSVLQGFN GTVFAYGQTG ENSTTRP00000015641/1-776 LGELPKTFTF DAVYDASSKQ ADLYDETVRP LVDSVLQGFN GTVFAYGQTG ENSP00000264712/1-793 PGELPKTFTF DAVYDASSKQ ADLYDETVRP LIDSVLQGFN GTVFAYGQTG ENSBTAP00000025475/1-792 LGELPKTFTF DAVYDASSKQ ADLYDETVRP LVDSVLQGFN GTVFAYGQTG 101 150 bmy_01051T0/1-573 TGKTYTMQGT WVEPEQRGVI PNAFEHIFTH ISRSQNQQYL VRASYLEIYQ BACU014527/1-774 TGKTYTMQGT WVEPEQRGVI PNAFEHIFTH ISRSQNQQYL IRASYLEIYQ ENSTTRP00000015641/1-776 TGKTYTMQGT WVEPEQRGVI PNAFEHIFTH ISRSQNQQYL VRASYLEIYQ ENSP00000264712/1-793 TGKTYTMQGT WVEPELRGVI PNAFEHIFTH ISRSQNQQYL VRASYLEIYQ ENSBTAP00000025475/1-792 TGKTYTMQGT WVEPEQRGVI PNAFEHIFTH ISRSQNQQYL VRASYLEIYQ 151 200 bmy_01051T0/1-573 EEIRDLLSKE PGKRLELKEN PETGVYIKDL SSFVTKNVKE IEHVMNLGNQ BACU014527/1-774 EEIRDLLSKE PGKRLELKEN PETGVYIKDL SSFVTKNVKE IEHVMNLGNQ ENSTTRP00000015641/1-776 EEIRDLLSKE PGKRLELKEN PETGVYIKDL SSFVTKNVKE IEHVMNLGNQ ENSP00000264712/1-793 EEIRDLLSKE PGKRLELKEN PETGVYIKDL SSFVTKNVKE IEHVMNLGNQ ENSBTAP00000025475/1-792 EEIRDLVSKE PGKRLELKEN PETGVYIKDL SSFVTKNVKE IEHVMNLGNQ 201 250 bmy_01051T0/1-573 TRAVGSTHMN EVSSRSHAIF VITVECSERG LDGQDHIRVG KLNLVDLAGS BACU014527/1-774 TRAVGSTHMN EVSSRSHAIF VITVECSERG LDGQDHIRVG KLNLVDLAGS ENSTTRP00000015641/1-776 TRAVGSTHMN EVSSRSHAIF VITVECSERG LDGQDHIRVG KLNLVDLAGS ENSP00000264712/1-793 TRAVGSTHMN EVSSRSHAIF IITVECSERG SDGQDHIRVG KLNLVDLAGS ENSBTAP00000025475/1-792 TRAVGSTHMN EVSSRSHAIF VITVECSERG SDGQDHIRVG KLNLVDLAGS 251 300 bmy_01051T0/1-573 ERQNKAGPNA AGGTATQPTG GGGGG---GG GGSGERPKEA SKINLSLSAL BACU014527/1-774 ERQNKAGPNA AGGTATQPTG GGGGG---GG GGSGERPKEA SKINLSLSAL ENSTTRP00000015641/1-776 ERQNKAGPNA AGGTATQPTG GGGGG---GG GGSGERPKEA SKINLSLSAL ENSP00000264712/1-793 ERQNKAGPNT AGGAATPSSG GGGGGGGSGG GAGGERPKEA SKINLSLSAL ENSBTAP00000025475/1-792 ERQNKAGPNT TGGTATQPTG GGGGGG--GG GGGGERPKEA SKINLSLSAL 301 350 bmy_01051T0/1-573 GNVIAALAGN RSTHIPYRDS KLTRLLQDSL GGNAKTIMVA TLGPASHSYD BACU014527/1-774 GNVIAALAGN RSTHIPYRDS KLTRLLQDSL GGNAKTIMVA TLGPASHSYD ENSTTRP00000015641/1-776 GNVIAALAGN RSTHIPYRDS KLTRLLQDSL GGNAKTIMVA TLGPASHSYD ENSP00000264712/1-793 GNVIAALAGN RSTHIPYRDS KLTRLLQDSL GGNAKTIMVA TLGPASHSYD ENSBTAP00000025475/1-792 GNVIAALSGN RSTHIPYRDS KLTRLLQDSL GGNAKTIMVA TLGPASHSYD 351 400 bmy_01051T0/1-573 ESLSTLRFAN RAKNIKNKPR VNEDPKDTLL REFQEEIARL KAQLEKKGML BACU014527/1-774 ESLSTLRFAN RAKNIKNKPR VNEDPKDTLL REFQEEIARL KAQLEKKGML ENSTTRP00000015641/1-776 ESLSTLRFAN RAKNIKNKPR VNEDPKDTLL REFQEEIARL KAQLEKKGML ENSP00000264712/1-793 ESLSTLRFAN RAKNIKNKPQ VNEDPKDTLL REFQEEIARL KAQLEKRGML ENSBTAP00000025475/1-792 ESLSTLRFAN RAKNIKNKPR VNEDPKDTLL REFQEEIARL KAQLEKKGML 401 450 bmy_01051T0/1-573 GKRLRRKSSR RKKAVSAPAG YPEGPVMEAW VAEEEDD-NN NYRPPQPTLE BACU014527/1-774 GKRLRRKSSR RKKAVSAPAG YPEGPVMEAW VAEEEDD-NN NYRLPQATLE ENSTTRP00000015641/1-776 GKRLRRKSSR RKKAVSAPAG YPEGPLMEAW -AEEEDD-NN NYRLPQPTLE ENSP00000264712/1-793 GKRPRRKSSR RKKAVSAPPG YPEGPVIEAW VAEEEDDNNN NHRPPQPILE ENSBTAP00000025475/1-792 GKRLRRKSSR RKKAVSAPAG YPEGPVIEAW VAEEEDDNNN NHRPPQPILE 451 500 bmy_01051T0/1-573 SALDKNMENY LQQQ-EQLEE EKAAIQDDRS LVSEEKRKLL EEKEKMLEDL BACU014527/1-774 SALDKNMENY LQQQKEQLEE EKAAIQDDRS LVSEEKQKLL EEKEKMLEDL ENSTTRP00000015641/1-776 SALDKNMENY LQEQKEQLEE EKAAIQDDRS LVSEEKQKLL EEKEKMLEDL ENSP00000264712/1-793 SALEKNMENY LQEQKERLEE EKAAIQDDRS LVSEEKQKLL EEKEKMLEDL ENSBTAP00000025475/1-792 TALDKNMENY LQEQKERLEE EKAAIQDDRS LVSEEKKKLL EEKEKMLEDL 501 550 bmy_01051T0/1-573 RQEQQATELL AAKYKVRAPE ----GAGALQ RS-------- ---------- BACU014527/1-774 RREQQATELL KVKYKAMESK LLIGGRNIMD HTNEQQKMLE LKRQEIAEQK ENSTTRP00000015641/1-776 RREQQATELL AAKYKAMESK LLIGGRNIMD HTNEQQKMLE LKRQEIAEQK ENSP00000264712/1-793 RREQQATELL AAKYKAMESK LLIGGRNIMD HTNEQQKMLE LKRQEIAEQK ENSBTAP00000025475/1-792 RREQEATELL AAKYKAMESK LLIGGRNIMD HTNEQQKMLE LKRQEIAEQK 551 600 bmy_01051T0/1-573 ---------- ---------- ---------- ---------- ---------- BACU014527/1-774 RREREMQQEM MLRDEETMEL RGTYTSLQQE VEVKTKKLKK LYAKLQAVKA ENSTTRP00000015641/1-776 RREREMQQEM MLRDEETMEL RGTYTSLQQE VEVKTKKLKK ---------- ENSP00000264712/1-793 RREREMQQEM MLRDEETMEL RGTYTSLQQE VEVKTKKLKK LYAKLQAVKA ENSBTAP00000025475/1-792 RREREMQQEM MLRDEETMEL RGTYTSLQQE VEVKTKKLKK LYAKLQAVKA 601 650 bmy_01051T0/1-573 ---------- ---------- ---------- ---------- ---------- BACU014527/1-774 EIQDQHDEYI RVRQDLEEAQ NEQTRELKLK YLIIENFIPP EEKNKIMNRL ENSTTRP00000015641/1-776 -IXXQHDEYI RVRQDLEEAQ NEQTRELKLK YLIIENFIPP EEKNKIMNRL ENSP00000264712/1-793 EIQDQHDEYI RVRQDLEEAQ NEQTRELKLK YLIIENFIPP EEKNKIMNRL ENSBTAP00000025475/1-792 EIQDQHDEYI RVRQDLEEAQ NEQTRELKLK YLIIENFIPP EEKNKIMNRL 651 700 bmy_01051T0/1-573 ---------- -----PEGSG LADFSLRVCD LAG------- ---------- BACU014527/1-774 FLDCEEEQWK FQPLMPGGAS SSQMKKRPTS AVGYKRPISQ YARVAMAMGS ENSTTRP00000015641/1-776 FLDCEEEQWK FQPLMPGGAS NSQMKKRPTS AVGYKRPISQ YARVAMAMGS ENSP00000264712/1-793 FLDCEEEQWK FQPLVPAGVS SSQMKKRPTS AVGYKRPISQ YARVAMAMGS ENSBTAP00000025475/1-792 FLDCEEEQWK FQPLVPSGAN SSQMKKRPTS AVGYKRPISQ YARVAMAMGS 701 750 bmy_01051T0/1-573 ---------- ---------- ---------- ---------- ---------- BACU014527/1-774 HPRYRD---- ---------- ------SSDL SDTAHALQLW QEVVASQTLL ENSTTRP00000015641/1-776 HPRYRAENIM FLELDVSPPA VFEMEFSHDQ EQDPRALHM- -ERLMRLDSF ENSP00000264712/1-793 HPRYRAENIM FLELDVSPPA VFEMEFSHDQ EQDPRALHM- -ERLMRLDSF ENSBTAP00000025475/1-792 HPRYRAENIM FLELDVSPPA VFEMEFSHDQ DQDPRALHM- -ERLMRLDSF 751 800 bmy_01051T0/1-573 ---------- -SRASCPPAK SSPGEGRQIS ATLDCQAEPP WST----- BACU014527/1-774 LARLPNPWTR IVNPPVAASL GPSGNGTVIE TMWTVIEGRP FVSVPSEN ENSTTRP00000015641/1-776 LERPSTSKVR KSRSWCQSPQ RPPPS-IAHA SL-ASAALLP TTALDHE- ENSP00000264712/1-793 LERPSTSKVR KSRSWCQSPQ RPPPS-TTHA SL-ASASLRP ATVADHE- ENSBTAP00000025475/1-792 LERPSTSKVR KSRSWCQSPQ RPPPP-TAHA SLAASAALRP TTVLDHE-