KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:26:26 2014 Check: 00 .. Name: ENSTTRP00000003594/1-494 Len: 574 Check: 3579 Weight: 1.00 Name: ENSBTAP00000025501/1-298 Len: 574 Check: 181 Weight: 1.00 Name: bmy_00159T0/1-377 Len: 574 Check: 4853 Weight: 1.00 Name: ENSP00000301329/1-298 Len: 574 Check: 8753 Weight: 1.00 // 1 50 ENSTTRP00000003594/1-494 MRLTPFSFSM GSSFMSRRLK KKTLGTAPAL RASAISLRPS NRIFPCFSRN ENSBTAP00000025501/1-298 ---------- ---------- ---------- ---------- ---------- bmy_00159T0/1-377 ---------- ---------- ---------- ---------- ---------- ENSP00000301329/1-298 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000003594/1-494 CLDLTTVITL LQPFVSGESL IIAKPRLFPG AGGLGWRHLT RLLQSLIAGT ENSBTAP00000025501/1-298 ---------- ---------- ---------- ---------- ---------- bmy_00159T0/1-377 ---------- ---------- ---------- ---------- ---------- ENSP00000301329/1-298 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000003594/1-494 GLCRRRGCFP GPGFRSTTPD GNTTFTGLRR SARTQRRRDH KSAPPATTVA ENSBTAP00000025501/1-298 ---------- ---------- ---------- ---------- ---------- bmy_00159T0/1-377 ---------- ---------- ---------- ---------- ---------- ENSP00000301329/1-298 ---------- ---------- ---------- ---------- ---------- 151 200 ENSTTRP00000003594/1-494 WPNTRAPPAP PSSLRRELRH EGAPAVISDV TTRGILCGRC GAVRVTAGHG ENSBTAP00000025501/1-298 MANRRA---- ---------- ---------- ---------- ---------- bmy_00159T0/1-377 MATRRA---- ---------- ---------- ---------- ---------- ENSP00000301329/1-298 MAARRA---- ---------- ---------- ---------- ---------- 201 250 ENSTTRP00000003594/1-494 VSSLHFVFKV GNRFQTACFY RDVLGMKI-R HEEFEEGCRA ACNGPYDGKW ENSBTAP00000025501/1-298 ---LHFVFKV GNRFETACFY RDVLGMKILR HEEFQDGCKA ACNGPHDGKW bmy_00159T0/1-377 ---LHFVFKV GNRFQTACFY RDVLGMKILR HEEFEEGCRA ACNGPYDGKW ENSP00000301329/1-298 ---LHFVFKV GNRFQTARFY RDVLGMKVLR HEEFEEGCKA ACNGPYDGKW 251 300 ENSTTRP00000003594/1-494 SKTMVGFGPE DDHFVAELTY NYGIGNYKLG NDFMXXXXXX XXXXXXXXXX ENSBTAP00000025501/1-298 SKTMAGYGPE DDHFVTKLTY YFGIGSYQLG NDFLGITVAS RQAVSNARKL bmy_00159T0/1-377 SKTMVGFGPE DDHFVAELTY NYGIGNYKLG NDFMGITLAS SQAVSNARKL ENSP00000301329/1-298 SKTMVGFGPE DDHFVAELTY NYGVGDYKLG NDFMGITLAS SQAVSNARKL 301 350 ENSTTRP00000003594/1-494 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXPVLKVTL AVSDLQKSLN ENSBTAP00000025501/1-298 KWPLSEMGDG VFETKAPGGY KFYLQDCSPP QSDPVLKVTL AVSDLQKSLN bmy_00159T0/1-377 EWPLSEVAEG VFETKAPGGY KFYLQNRSPS QSDPVLKVTL AVSDLQKSLN ENSP00000301329/1-298 EWPLTEVAEG VFETEAPGGY KFYLQNRSLP QSDPVLKVTL AVSDLQKSLN 351 400 ENSTTRP00000003594/1-494 YWSNLLGMKI YEKDEKKQRA LLGYADNQCK LELQGIQGAV VHATAFGRIA ENSBTAP00000025501/1-298 YWSNLLGMKI YEEDEKKQRA LLGYADNQCK LELRAIPGKV DHATGFGRIA bmy_00159T0/1-377 YWSSLLGMKI YEKDEKKQRA LLGYADNQCK LELQGIQGAV DHATAFGRIA ENSP00000301329/1-298 YWCNLLGMKI YEKDEEKQRA LLGYADNQCK LELQGVKGGV DHAAAFGRIA 401 450 ENSTTRP00000003594/1-494 FSCPQKELSD LEDLMKRENQ KILTPLVSLD TPGKATVQVI ILADPDGHEI ENSBTAP00000025501/1-298 FSCPQKELSD LEDLMKRENQ KILTPLVSLD TPGKATVQVI ILADPDGHEI bmy_00159T0/1-377 FSCPQKELSD LEDLMKRENQ KILTPLVSLD TPGKATVQVI ILADPDGHEI ENSP00000301329/1-298 FSCPQKELPD LEDLMKRENQ KILTPLVSLD TPGKATVQVV ILADPDGHEI 451 500 ENSTTRP00000003594/1-494 CFVGDEAFRE LSKMDPEGSK LLDD------ ---------- ---AMAKDKS ENSBTAP00000025501/1-298 CFVGDEAFRE LSKVDPEGNK LLDD------ ---------- ---AISGDKS bmy_00159T0/1-377 CFVGDEAFRE LSKMDTEGSK LLDDVSLISK FISPSAQGGA VKVCMKKDPS ENSP00000301329/1-298 CFVGDEAFRE LSKMDPEGSK LLDD------ ---------- ---AMAADKS 501 550 ENSTTRP00000003594/1-494 DE-------- ---------- ---------- ---WFAAQNK PKASG----- ENSBTAP00000025501/1-298 DE-------- ---------- ---------- ---WFAAQKK PKATG----- bmy_00159T0/1-377 IRGQFLLSEP CPFEVTFEPE TCVNFIATYV TLIWVQQWQK IKVMNGLLHK ENSP00000301329/1-298 DE-------- ---------- ---------- ---WFAKHNK PKASG----- 551 600 ENSTTRP00000003594/1-494 ---------- ---------- ---- ENSBTAP00000025501/1-298 ---------- ---------- ---- bmy_00159T0/1-377 RNQRLQVNRR HHVEQALVIP VEHL ENSP00000301329/1-298 ---------- ---------- ----