KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:26:27 2014 Check: 00 .. Name: ENSP00000338671/1-696 Len: 700 Check: 1936 Weight: 1.00 Name: ENSBTAP00000025506/1-698 Len: 700 Check: 4602 Weight: 1.00 Name: ENSTTRP00000001021/1-698 Len: 700 Check: 5352 Weight: 1.00 Name: bmy_01392T0/1-665 Len: 700 Check: 7952 Weight: 1.00 Name: BACU003414/1-700 Len: 700 Check: 7945 Weight: 1.00 // 1 50 ENSP00000338671/1-696 MDADMDYERP NVETIKCVVV GDNAVGKTRL ICARACNTTL TQYQLLATHV ENSBTAP00000025506/1-698 MDADMDYERP NVETIKCVVV GDNAVGKTRL ICARACNTTL TQYQLLATHV ENSTTRP00000001021/1-698 MDTDMDYERP NVETIKCVVV GDNAVGKTRL ICARACNTTL TQYQLLATHV bmy_01392T0/1-665 MDTDMDYERP NVETIKCVVV GDNAVGKTRL ICARACNTTL TQYQLLATHV BACU003414/1-700 MDTDMDYERP NVETIKCVVV GDNAVGKTRL ICARACNTTL TQYQLLATHV 51 100 ENSP00000338671/1-696 PTVWAIDQYR VCQEVLERSR DVVDEVSVSL RLWDTFGDHH KDRRFAYGRS ENSBTAP00000025506/1-698 PTVWAIDQYR VCQEVLERSR DVVDEVSVSL RLWDTFGDHH KDRRFAYGRS ENSTTRP00000001021/1-698 PTVWAIDQYR VCQEVLERSR DVVDEVSVSL RLWDTFGDHH KDRRFAYGRS bmy_01392T0/1-665 PTVWAIDQYR VCQEVLERSR DVVDEVSVSL RLWDTFGDHH KDRRFAYGRS BACU003414/1-700 PTVWAIDQYR VCQEVLERSR DVVDEVSVSL RLWDTFGDHH KDRRFAYGRS 101 150 ENSP00000338671/1-696 DVVVLCFSIA NPNSLNHVKS MWYPEIKHFC PRTPVILVGC QLDLRYADLE ENSBTAP00000025506/1-698 DVVVLCFSIA NPNSLNHVKT MWYQEIKHFC PRTPVVLVGC QLDLRYADLE ENSTTRP00000001021/1-698 DVVVLCFSIA NPNSLNHVKT MWYQEIKHFC PRTPVVLVGC QLDLRYADLE bmy_01392T0/1-665 DVVVLCFSIA NPNSLNHVKT MWYQEIKHFC PRTPVVLVGC QLDLRYADLE BACU003414/1-700 DVVVLCFSIA NPNSLNHVKT MWYQEIKHFC PRTPVVLVGC QLDLRYADLE 151 200 ENSP00000338671/1-696 AVNRARRPLA RPIKRGDILP PEKGREVAKE LGLPYYETSV FDQFGIKDVF ENSBTAP00000025506/1-698 AVNRARRPLA RPIKRGDILP PEKGREVAKE LGIPYYETSV FDQFGIKDVF ENSTTRP00000001021/1-698 AVNRARRPLA RPIKRGDILP PEKGREVAKE LGIPYYETSV FDQFGIKDVF bmy_01392T0/1-665 AVNRARRPLA RPIKRGDILP PEKGREVAKE LGIPYYETSV FDQFGIKDVF BACU003414/1-700 AVNRARRPLA RPIKRGDILP PEKGREVAKE LGIPYYETSV FDQFGIKDVF 201 250 ENSP00000338671/1-696 DNAIRAALIS RRHLQFWKSH LKKVQKPLLQ APFLPPKAPP PVIKIPECPS ENSBTAP00000025506/1-698 DNAIRAALIS RRHLQFWKSH LKKVQKPLLQ APFLPPKAPP PVIKVPECPS ENSTTRP00000001021/1-698 DNAIRAALIS RRHLQFWKSH LKKVQKPLLQ APFLPPKAPP PVIKVPECPS bmy_01392T0/1-665 DNAIRAALIS RRHLQFWKSH LKKVQKPLLQ APFLPPKAPP PVIKVPECPS BACU003414/1-700 DNAIRAALIS RRHLQFWKSH LKKVQKPLLQ APFLPPKAPP PVIKVPECPS 251 300 ENSP00000338671/1-696 MGTNEAACLL DNPLCADVLF ILQDQEHIFA HRIYLATSSS KFYDLFLMEC ENSBTAP00000025506/1-698 TGTNEAACLL DNPLCADVLF ILQDQEQIFA HRIYLATSSS KFYDLFLMEC ENSTTRP00000001021/1-698 TGTNEAACLL DNPLCADVLF VLQDQEQIFA HRIYLATSSS KFYDLFLMEC bmy_01392T0/1-665 TGTNEAACLL DSPLCADVLF ILQDQERIFA HRIYLATSSS KFYDLFLMEC BACU003414/1-700 TGTNEAACLL DSPLCADVLF ILQDQEQIFA HRIYLATSSS KFYDLFLMEC 301 350 ENSP00000338671/1-696 EESPNGSEGA CEKEKQSRDF QGRILSVDPE EEREEGPPRI PQADQWKSSN ENSBTAP00000025506/1-698 EETPHWSEGA CEREKQSRDS QEWAQSLDPD EEREEGTPRT PQADQWTPSS ENSTTRP00000001021/1-698 EETPHWSEGA CEQEKQSRDF QGRPLSLDPD EEREEGTPRT PQADQWTSSS bmy_01392T0/1-665 EETPHWSEGA CEQEKQSRGF QG-PLSLDPD EEREEGTPRT PQADQWASSS BACU003414/1-700 EETPHWSEGA CEQEKQSRDF QGRPLSLDPD EEREEGTPRT SQADQWASSS 351 400 ENSP00000338671/1-696 KSLV--EALG LEAEGAVPET QTLTGWSKGF IGMHREMQVN PISKRMGPMT ENSBTAP00000025506/1-698 QNLSQQETLG LDAEDLVAET QTLLGWSKGF IGMHKEMQVN PVSKRLGPVT ENSTTRP00000001021/1-698 QNLSQQETPG LEAEGSAAET QTLSGWSKGF VAMHKEMQVN PISKRVGPMT bmy_01392T0/1-665 QNLSQQETPG LEAEGSAAET QTLSGWSKGF VGMHKETQVN PVSKRVGPMT BACU003414/1-700 QNLSQQETPG LEAEGSAAET QTLSGWSKGF VGMHKEMQVN PVSKRVGPMT 401 450 ENSP00000338671/1-696 VVRMDASVQP GPFRTLLQFL YTGQLDEKEK DLVGLAQIAE VLEMFDLRMM ENSBTAP00000025506/1-698 VVRMDASVQP GPFRTLLQFL YTGQLDEKEK DLVGLAQIAE VLEMFDLRMM ENSTTRP00000001021/1-698 VVRMDPSVQP GPFRTLLQFL YTGQLDEKEK DLVGLAQIAE VLEMFDLRMM bmy_01392T0/1-665 VVRMDPSVQP GPFRTLLQFL YTGQLDEKEK DLVGLAQIAE VLEMFDLRMM BACU003414/1-700 VVRMDPSVQP GPFRTLLQFL YTGQLDEKEK DLVGLAQIAE VLEMFDLRMM 451 500 ENSP00000338671/1-696 VENIMNKEAF MNQEITKAFH VRKANRIKEC LSKGTFSDVT FKLDDGAISA ENSBTAP00000025506/1-698 VENIMNKEAF MNQEITKAFH VRKANRIKEC LSKGTFSDVT FKLDDGAISA ENSTTRP00000001021/1-698 VENIMNKEAF MNQEITKAFH VRKANRIKEC LSKGTFSDVT FKLDDGAISA bmy_01392T0/1-665 VENIMNKEAF MNQEITKAFH VRKANRIKEC LSKGTFSDVT FKLDDGAISA BACU003414/1-700 VENIMNKEAF MNQEITKAFH VRKANRIKEC LSKGTFSDVT FKLDDGAISA 501 550 ENSP00000338671/1-696 HKPLLICSCE WMAAMFGGSF VESANSEVYL PNINKISMQA VLDYLYTKQL ENSBTAP00000025506/1-698 HKPLLICSCK WMAAMFGGSF VESANSEVYL PNINKMSMQA VLDYLYTKHL ENSTTRP00000001021/1-698 HKPLLICSCK WMAAMFGGSF VESANSEVYL PNINKMSMQA VLDYLYTKQL bmy_01392T0/1-665 HKPLLICSCK WMAAMFGGSF VESANSEVYL PNINKMSMQA VLDYLYTKQL BACU003414/1-700 HKPLLICSCK WMAAMFGGSF VESANSEVYL PNINKMSMQA VLDYLYTKQL 551 600 ENSP00000338671/1-696 SPNLDLDPLE LIALANRFCL PHLVALAEQH AVQELTKAAT SGVGIDGEVL ENSBTAP00000025506/1-698 PPNLDLDPLE LIALANRFCL PHLVALAEQH AVQELTKAAM SGVGIDGEVL ENSTTRP00000001021/1-698 SPNLDLDPLE LIALANRFCL PHLVALAEQH AVQELTRAAM SGVGIDGEVL bmy_01392T0/1-665 SPNLDLDPLE LIALANRFCL PHLVALAERH AVQELTKAAM SGVGIDGEVL BACU003414/1-700 SPNLDLDPLE LIALANRFCL PHLVALAEQH AVQELTKAAT SGVGIDAEVL 601 650 ENSP00000338671/1-696 SYLELAQFHN AHQLAAWCLH HICTNYNSVC SKFRKEIKSK SADNQEYFER ENSBTAP00000025506/1-698 SYLELAQFHN AHQLAAWCLH HICTNYNSVC SKFRKEIKSK SADNQEYFER ENSTTRP00000001021/1-698 SYLELAQFHN AHQLAAWCLH HICTNYNSVC SKFRKEIKSK SADNQEYFER bmy_01392T0/1-665 SYLELAQFHN AHQLAAWCLH HICTNYNSVC SKFRKEIKSK SAGK------ BACU003414/1-700 SYLELAQFHN AHQLAAWCLH HICTNYNSVC SKFRKEIKSK SADNQEYFER 651 700 ENSP00000338671/1-696 HRWPPVWYLK EEDHYQRVKR EREKEDIALN KHRSRRKWCF WNSSPAVA-- ENSBTAP00000025506/1-698 HRWPPVWYLK EEDHYQRVKR EREKEDIALN KHHSRRKWCF WNSSPAVA-- ENSTTRP00000001021/1-698 HRWPPVWYLK EEDHYQRVKR EREKEDIALN KHHSRRKWCF WNSSPAVA-- bmy_01392T0/1-665 ---------- ---------- ------IHVA AEVDQRRPPT PAEIQRGL-- BACU003414/1-700 HRWPPVWYLK EEDHYQRVKR ERXXXXXXXX XXXXXXXXXX XXXXRRKILH