KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:26:30 2014 Check: 00 .. Name: ENSP00000251296/1-467 Len: 469 Check: 2043 Weight: 1.00 Name: ENSBTAP00000025516/1-374 Len: 469 Check: 9172 Weight: 1.00 Name: ENSTTRP00000011043/1-444 Len: 469 Check: 8406 Weight: 1.00 Name: bmy_22636T0/1-304 Len: 469 Check: 4485 Weight: 1.00 Name: BACU005703/1-131 Len: 469 Check: 6546 Weight: 1.00 // 1 50 ENSP00000251296/1-467 MRTAPSLRRC VCLLLAAILD LARGYLTVNI EPLPPVVAGD AVTLKCNFKT ENSBTAP00000025516/1-374 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011043/1-444 ---------- ---------- ----YLTVNI EPLPPVVAGD AVTLKCNFKT bmy_22636T0/1-304 ---------- ---------- ---------- ---------- ---------- BACU005703/1-131 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000251296/1-467 DGRMREIVWY RVTDGGTIKQ KIFTFDAMFS TNYSHMENYR KREDLVYQST ENSBTAP00000025516/1-374 ---------- ---------- ---------- ---------- ----LLLCAT ENSTTRP00000011043/1-444 DGRMREIVWY RVTDGGTIKQ KIFTFDAMFS TNFSHMENYR KREDLVYQST bmy_22636T0/1-304 ---------- ---------- ---------- ---------- ---------- BACU005703/1-131 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000251296/1-467 VRLPEVRISD NGPYECHVGI YDRATREKVV LASGNIFLNV MAPPTSIEVV ENSBTAP00000025516/1-374 HRLPEVRVSD NGPYECHVGI YDRATREKVV LASGNIFLNV MAPPTSIEVV ENSTTRP00000011043/1-444 VRLAEVAILD NGPXXXXXXX XXXXXXXXXX XXXXXXXXXX XXPPTSIEVV bmy_22636T0/1-304 ---------- ---------- ---ATRRKRL LKDWTLWPVP LRAHWEIHVI BACU005703/1-131 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000251296/1-467 AADT-PAPFS RYQAQNFTLV CIVSGGKPAP MVYFKRDGEP IDAVPLSEPP ENSBTAP00000025516/1-374 AADT-PAPFS RYQAQNFTLV CIVSGGKPAP TVYFKRDGEP IDAVPLSEPP ENSTTRP00000011043/1-444 AADT-PAPFS RYQAQNFTLV CIVSGGKPAP TVYFKRDGEP IDAVPLSEPP bmy_22636T0/1-304 GAKSFPTPSL QFQ------- ---------- -VYFKRDGEP IDAVPLSEPP BACU005703/1-131 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000251296/1-467 AASSGPLQDS RPFRSLLHRD LDDTKMQKSL SLLDAENRGG RPYTERPSRG ENSBTAP00000025516/1-374 AASSGPLQDS RPFRSLLHRD LDETKMQRSV SLLDAETRGG RPSTERPSRS ENSTTRP00000011043/1-444 AASSGPLQDS RPFRGLLHRD LDDTKMQRSL SLLDAESRGG HSYTERPSRS bmy_22636T0/1-304 AASSGPLQDS RPFRSLLHRD LDDTKMQRSL SLLDAESRGG HSYTEHPSRS BACU005703/1-131 ---------- ---------- ---------- ---------- ---------- 251 300 ENSP00000251296/1-467 LTPDPNILLQ PTTENIPETV VSREFPRWVH SAEPTYFLRH SRTPSSDGTV ENSBTAP00000025516/1-374 LTPDPSSVIQ PTTESIPETV VSREFPRWVH SSEPVYFLRH SHSPGSDGTV ENSTTRP00000011043/1-444 LTPDPSIPLQ PTTENIPETV VSREFPRWVH SSEPVYFLSH SRTPGSDGTV bmy_22636T0/1-304 LTPDPSILLQ PTTENIPETV VSREFPRWVH SSEPVYFLSH SRTPGSDGTV BACU005703/1-131 ---------- ---------- ---------- ---------- ---------- 301 350 ENSP00000251296/1-467 EVRALLTWTL NPQIDNEALF SCEVKHPALS MPMQAEVTLV APKGPKIVMT ENSBTAP00000025516/1-374 EVRALLTWTL NPQIDNEALF SCEVKHPALS MPMQAEVTLV APKGPKIMMT ENSTTRP00000011043/1-444 EVRALLTWTL NPQIDNEALF SCEVTHPALS MPMQAEVTLV APKGPQIMMT bmy_22636T0/1-304 EVRALLTWTL NPQIDNEALF SCEVKHPALS MPMQAEVTLV APKGPKIMMT BACU005703/1-131 ---------- ---------- ---------- --------IV APKGPKIMMT 351 400 ENSP00000251296/1-467 PSRARVGDTV RILVHGFQNE VFPEPMFTWT RVGSRLLDGS AEFDGKELVL ENSBTAP00000025516/1-374 PSRARVGDTV RILVHGFQNE VFPEPMFTWT RVGSRLLDGS AEFDGKELVL ENSTTRP00000011043/1-444 PSRARVGDTV RILVHGFQNE VFPEPMFTWT RVGSRLLDGS AEFDGKELVL bmy_22636T0/1-304 PSRARVGDTV RILVHGFQNE VFPEPMFTWT RVGSRLLDGS AEFDGKELVL BACU005703/1-131 PSRARVGDTV RILVHGFQNE VFPEPMFTWT RVGSRLLDGS AEFDGRELVL 401 450 ENSP00000251296/1-467 ERVPAELNGS MYRCTAQNPL GSTDTHTRLI VFENPNIPRG TEDSNGSI-G ENSBTAP00000025516/1-374 ERVPAELNGS MYRCMAQNPL GSTDTHTRLI VFENPNIPRG TEDSDGSASG ENSTTRP00000011043/1-444 ERVPAELNGS MYRCTAQNPL GSTDTHTRLI VFENPNIPKG TEDSNGSTSG bmy_22636T0/1-304 ERVPAELNGS MYRCMAQNPL GSTDTHTRLI VFENPNIPKG TEDSN----- BACU005703/1-131 ERVPAELNGS MYRCMAQNPL GSTDTHTRLI VFENPNIPKG TEDSNGSMSG 451 500 ENSP00000251296/1-467 PTGARLTLVL ALTVILELT ENSBTAP00000025516/1-374 PAGVRLTLVL ALTVVLELT ENSTTRP00000011043/1-444 PAGIRLTLVL ALTVVLELT bmy_22636T0/1-304 ---------- --------- BACU005703/1-131 PAGIRLTLVL ALTVVLELT