KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:26:32 2014 Check: 00 .. Name: ENSTTRP00000005235/1-419 Len: 426 Check: 2309 Weight: 1.00 Name: BACU019035/1-420 Len: 426 Check: 4960 Weight: 1.00 Name: ENSP00000313309/1-418 Len: 426 Check: 4138 Weight: 1.00 Name: bmy_06364T0/1-387 Len: 426 Check: 4134 Weight: 1.00 Name: ENSBTAP00000025532/1-419 Len: 426 Check: 2068 Weight: 1.00 // 1 50 ENSTTRP00000005235/1-419 MGEEGTEGTV HLLCLAASSG VPLFCRSSRG GAPARQQLPF SVIGSLNGVH BACU019035/1-420 MGEEGTEGTV HLLCLAASSG VPLFCRSSRG GAPARQQLPF SVIGSLNGVH ENSP00000313309/1-418 MGEEGTGGTV HLLCLAASSG VPLFCRSSRG GAPARQQLPF SVIGSLNGVH bmy_06364T0/1-387 MGEEGTEGTV HLLCLAASSG VPLFCRSSRG GAPARQQLPF SVIGSLNGVH ENSBTAP00000025532/1-419 MGEEGTEGTI HLLCLAASSG VPLFCRSSRG GAPARQQLPF SVIGSLNGVH 51 100 ENSTTRP00000005235/1-419 MFGQNLEVQL SSAKTEDTTV VWKSFHDSIT LIVLSSEEGT SELRLERLLQ BACU019035/1-420 MFGQNLEVQL SSAKTEDTTV VWKSFHDSIT LIVLSSEEGS SELRLERLLQ ENSP00000313309/1-418 MFGQNLEVQL SSARTENTTV VWKSFHDSIT LIVLSSEVGI SELRLERLLQ bmy_06364T0/1-387 MFGQNLEVQL SSAKTEDTTV VWKSFHDSIT LIVLSSEEGT SELRLERLLQ ENSBTAP00000025532/1-419 MFGQNLEVQL SSSRTEDTTV VWKSFHDSIT LIVLSSEEGT SELRLERLLQ 101 150 ENSTTRP00000005235/1-419 MVFGAMVLLV GLEELTNIRN VERLKKELRA SYRLIDSFLG DSELIGDLTQ BACU019035/1-420 MVFGAMVLLV GLEELTNIRN VERLKKELRA SYRLIDSFLG DSELIGDLTQ ENSP00000313309/1-418 MVFGAMVLLV GLEELTNIRN VERLKKDLRA SYCLIDSFLG DSELIGDLTQ bmy_06364T0/1-387 MVFGAMVLLV GLEELTNIRN VERLKKELRA SYRLIDSFLG DSELIGDLTQ ENSBTAP00000025532/1-419 MVFGAMVLLV GLEELTNIRN VERLKKELRA SYRLIDSFLG DSELIGDLTQ 151 200 ENSTTRP00000005235/1-419 CVDCVVPPEG SLLQEALSGF AEAAGTAFVS LVVSGRVVAA TESWWRLGMP BACU019035/1-420 CVDCVVPPEG SLLQEALSGF AEAAGTAFVS LVVSGRVVAA TESWWRLGMP ENSP00000313309/1-418 CVDCVIPPEG SLLQEALSGF AEAAGTTFVS LVVSGRVVAA TEGWWRLGTP bmy_06364T0/1-387 CVDCVVPPEG SLLQEALSGF AEAAGTAFVS LVVSGRVVAA TESWWRLGMP ENSBTAP00000025532/1-419 CVDCVVPPEG SLLQEALSGF AEAAGTAFIS LVVSGRVVAA TESWWRLGMP 201 250 ENSTTRP00000005235/1-419 EAVLLPWLVG SLPPQAARDY PVYLPHGSPT VPHRL----- LTLTLLPGLE BACU019035/1-420 EAVLLPWLVG SLSPQAARDY PVYLPHGSPT VRAWAGEGLS VTLSLFP-LQ ENSP00000313309/1-418 EAVLLPWLVG SLPPQTARDY PVYLPHGSPT VPHRL----- LTLTLLPSLE bmy_06364T0/1-387 EAVLLPWLVG SLPPQAARDY PVYLPHGSPT ---------- ---------- ENSBTAP00000025532/1-419 EAVLLPWLVG SLPPQAARDY PVYLPHGSPT VPHRL----- LTLTLLPDLE 251 300 ENSTTRP00000005235/1-419 LCLLCGPRPP LSQLDAQXXX XXXXX--XXX XXXXXXXXXX XXXXXXXXXX BACU019035/1-420 NRLLSSVGAS -----SAPST PWSPPRTLHQ VSGGHSAPFA QAGTLSPSSH ENSP00000313309/1-418 LCLLCGPSPP LSQLYPQLLE RWWQP--LLD PLRACLPLGP RALPSGFPLH bmy_06364T0/1-387 ---------- -------LLE RWXQP--LLD PLRACLPLGS RALPAGFPLH ENSBTAP00000025532/1-419 LCLLCGPQPP LSQLDAQLLE RWWQP--LLE PLRGCLPLGT RALPAGFPLH 301 350 ENSTTRP00000005235/1-419 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU019035/1-420 NVVVGKLVEA SCEVGVAVCV DWAVHTDRKA REGQGVVQAP LVTSALAVLP ENSP00000313309/1-418 TDILGLLLLH LELKRCLFTV EPLGDKEPSP EQRRRLLRNF YTLVTSTHFP bmy_06364T0/1-387 TDILGLLLLH LELKRCLFTV EPSGDKEPSS EQRRRLFRSF YTLVTATHFA ENSBTAP00000025532/1-419 TDILGLLLLH LELKRCLFTV EPSRDKEPSP EHRRRLLRSF YTLVTATHFP 351 400 ENSTTRP00000005235/1-419 XXAGQPEEKA EEVVHRAQVP RACYLVSGAE EPGTGWRLVA LQLGPRRLLL BACU019035/1-420 SEPGQPEEKA EEVVHRAQVP RACYLVLGAE EPGTGWRLVA LQLGPRRLLL ENSP00000313309/1-418 PEPGPP-EKT EDEVYQAQLP RACYLVLGTE EPGTGVRLVA LQLGLRRLLL bmy_06364T0/1-387 PEPGQPEEKA EEVVHRAQVP RACYLVLGAE EPGTGWRLVA LQLGPRRLLL ENSBTAP00000025532/1-419 PEPGQPEEKA EEAIHRAQVA RACYLVLGTE EPGTGWRLVA LQLGPRRLLL 401 450 ENSTTRP00000005235/1-419 LLSAQSPTHG LRGLATHTLH ALTPLL BACU019035/1-420 LLSAQSPTHG LRGLATHTLH ALTPLL ENSP00000313309/1-418 LLSPQSPTHG LRSLATHTLH ALTPLL bmy_06364T0/1-387 LLSAQSPTHG LRGLATHTLH ALTPLL ENSBTAP00000025532/1-419 LLSAQSPTYG LRGLATHTLH ALTPLL