KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:26:38 2014 Check: 00 .. Name: ENSP00000272852/1-374 Len: 375 Check: 4837 Weight: 1.00 Name: BACU014166/1-183 Len: 375 Check: 6216 Weight: 1.00 Name: ENSBTAP00000025539/1-375 Len: 375 Check: 48 Weight: 1.00 Name: bmy_01670T0/1-253 Len: 375 Check: 6910 Weight: 1.00 Name: ENSTTRP00000013971/1-369 Len: 375 Check: 2281 Weight: 1.00 // 1 50 ENSP00000272852/1-374 MKPLLETLYL LGMLVPGGLG YDRSLAQHRQ EIVDKSVSPW S-LETYSYNI BACU014166/1-183 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025539/1-375 MKPLLGTFYL LGMLVPGWLG YDRSLTQQRQ EVVDKVVSPW SILETYSYNR bmy_01670T0/1-253 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013971/1-369 MKPLLGNLYL PRLLVPAELE YDRSVA---Q EAVDNVVSPW RILETYSYNR 51 100 ENSP00000272852/1-374 YHPMGEIYEW MREISEKYKE VVTQHFLGVT YETHPMYYLK ISQPSGNPKK BACU014166/1-183 ---------- ---------- ---------- ------MFLN LNKST----- ENSBTAP00000025539/1-375 YHPMGEIYQW MSEIREKYTE VVTQHFLGMT YESRPMYYLK ISQPSSNPKK bmy_01670T0/1-253 ---------- ---------- --------MT YESRPMYYLK I--------- ENSTTRP00000013971/1-369 YHPMGEIYQW MSEIREKYTE VVT-HFLGMT YESRPMYYLK ISQPSNNPKK 101 150 ENSP00000272852/1-374 IIWMDCGIHA REWIAPAFCQ WFVKEILQNH KDNSSIRKLL RNLDFYVLPV BACU014166/1-183 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025539/1-375 IIWMDCGIHA REWIAPAFCQ WFVKEILQNY EDNSRIRRLL KNLDFYVLPV bmy_01670T0/1-253 ---------- ---------- ------LQNY KDNSRIRSLL KNLDFYVLPV ENSTTRP00000013971/1-369 IIWMDCGIHA REWIAPAFCQ WSVKEILQNY KDNSRIRSLL KNLDFYVLPV 151 200 ENSP00000272852/1-374 LNIDGYIYTW TTDRLWRKSR SPHNNGTCFG TDLNRNFNAS WCSIGASRNC BACU014166/1-183 ---------- ---------- ---------G LEANR----- --GIGASHNC ENSBTAP00000025539/1-375 LNIDGYIYTW TTDRLWRKSR SSHNNGTCFG TDLNRNFDAS WCSIGASHNC bmy_01670T0/1-253 LNIDGYIYTW TTDWLWRKSH SSHNNGMCFG TDLNRNFDAS WCSIGASHNC ENSTTRP00000013971/1-369 LNIDGYIYTW TTDRLWRKSH SSHNNGMCFG TDLNRNFDAS -CSISASHNC 201 250 ENSP00000272852/1-374 QDQTFCGTGP VSEPETKAVA SFIESKKDDI LCFLTMHSYG QLILTPYGYT BACU014166/1-183 Q-------GP MSEPETKVVS SFFESEKENT ACFLAMHSYG QLILVPYGYT ENSBTAP00000025539/1-375 ESLTFCGTGP MSEPETKAVS SFIESKKENI ACFLTMHSYG QLILVPYGYT bmy_01670T0/1-253 QDLTFCGTGP MSEPETKVXS SFIESKKENT ACFLTMHSYG QLILVPYGYT ENSTTRP00000013971/1-369 QDLTFCGTRP MSEPETKVVS SFIESRKENI ACFLTMHSYG QLILMPYGYT 251 300 ENSP00000272852/1-374 KNKSSNHPEM IQVGQKAANA LKAKYGTNYR VGSSADILYA SSGSSRDWAR BACU014166/1-183 KNKSSNHEQL IQVGQKAANA LKAKHGTNYR VGSSADILY- -------WAW ENSBTAP00000025539/1-375 KNKSNNHEEL IQVGQKAANA LKAKHGTNYR VGSSADILYA TSGSSRDWAR bmy_01670T0/1-253 KNKSSNHEEL IQVGQKAANA LKAKHGTNYR VGSSADILY- -------WAW ENSTTRP00000013971/1-369 KNKSSNHEEL IQVGQKAANA LKAKHGTNYR IGSSADILYA ISGFS-DWAW 301 350 ENSP00000272852/1-374 DIGIPFSYTF ELRDSGTYGF VLPEAQIQPT CEETMEAVLS VLDDVYAKHW BACU014166/1-183 DIGIPSSYAF ELRDNGTYGF VLPETQIQAT CEETMEAVLS VLDDVYEKYW ENSBTAP00000025539/1-375 DIGIPFSYTF ELRDNGTYGF VLPETQIQAT CEETMEAVLS VLDDVYEKYW bmy_01670T0/1-253 DIGIPFSYAF ELRDNGTYGF VLPETQIQAT CEETMEAVLS VLDDVYEKYW ENSTTRP00000013971/1-369 DIGIPFSYAF ELRDMGTYGF VLPETQIQAT CEETMEAVLS VLDNVYEKYW 351 400 ENSP00000272852/1-374 HSDSAGRVTS ATMLLGLLVS CMSLL BACU014166/1-183 YSNSAGKVTS TAVVLSLLKS FIFLL ENSBTAP00000025539/1-375 YTNSARKAKS TALVLGLLMS FMSLL bmy_01670T0/1-253 YSNGAGKVTS -AVVLNLLMS FIFLL ENSTTRP00000013971/1-369 YSNSAGKVTS TAVVLSLLMS FMFLL