KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:26:38 2014 Check: 00 .. Name: ENSP00000298784/1-835 Len: 920 Check: 8674 Weight: 1.00 Name: ENSBTAP00000025542/1-906 Len: 920 Check: 7363 Weight: 1.00 Name: BACU005452/1-872 Len: 920 Check: 6032 Weight: 1.00 Name: bmy_16897T0/1-560 Len: 920 Check: 1048 Weight: 1.00 Name: ENSTTRP00000007714/1-545 Len: 920 Check: 6352 Weight: 1.00 // 1 50 ENSP00000298784/1-835 MSGGSQVHIF WGAPIAPLKI TVSEDTASLM SVADPWKKIQ LLYSQHSLYL ENSBTAP00000025542/1-906 MSGGSQVHIF WGAPVSPLEM TVSQEPTSVA STAETWKEIQ VLYNHHSLYL BACU005452/1-872 MSGGSQVHIF WGAPVSPLEM TVSQEPTSLV STADPWKEIQ LLYNHHSLHL bmy_16897T0/1-560 MSGGSQVHIF WGAPVSPLEM IVSQEPTSLV STADPWKEIQ LLYHHHSLHL ENSTTRP00000007714/1-545 MSGGSQVHIF WGAPISPLEM TVSQEPTSLV STADPWKEIQ LLYNHHSLHL 51 100 ENSP00000298784/1-835 KDEK-QHKNL ENYKVPESIG SPDLS-GHFL ANCMNRHVHV KDDFVRSVSE ENSBTAP00000025542/1-906 KDEKCRHKNL EDCQALEPLG LPDLPHGHFP ANSMNRSVHM KDDTTHRISE BACU005452/1-872 KDEKCRHKSL EDYQDLEPLD PPDLPHGHFP ANSVNRSVHV KDDFTHCISE bmy_16897T0/1-560 KDEKCRHKSL EDYQALEPLD PPDLPHGHFP ANSVNRSVHV KDDFTHCISE ENSTTRP00000007714/1-545 KDEKCRHKSL EDYQALEPLD PPDLPRGHFP ANSVNRSVHV KDDFTHCISE 101 150 ENSP00000298784/1-835 TQNIESQKIH SSRLSDITSS NMQICGFKST VPHFTEEEKY QKLLSE-NKI ENSBTAP00000025542/1-906 AQTVKSQKAY PLGMSDRTSS SEQVRGFKGG VQHFTEEEKY QKLSSELKKT BACU005452/1-872 TQTIKSQKSH PLGLSDRTNS SDQICGFKAG FQHLTEEEKY QKLFSEHQGI bmy_16897T0/1-560 TQTIKSQKSH PLGLSDRTNS SDQICGFKAG FQHLTEEEKY QKLFSEHKKI ENSTTRP00000007714/1-545 TQTIKSQKSH PLGLSDRTNS SDQICGFKAG FQHLTEEEKY QKLFSEHKKI 151 200 ENSP00000298784/1-835 RDEQPKHQPD ICGKNFNTNL FQLGHKCAAV LDLVCSTEKI NIGPEVVQRE ENSBTAP00000025542/1-906 RNEQH-DQSN MCGQNIPKNP FHLAHKCAAI LDAVCGAEQT NT-PEAIKIN BACU005452/1-872 TDEQHKDQSN IHGQNVPKNS FQLDHKCAAI LDVVCGAEQT NTGPGAMETD bmy_16897T0/1-560 TDEQHKDQSN IHGQNVPKNS FQLDHKCAAI LDVVCGAEQT NTGPGAMETN ENSTTRP00000007714/1-545 TVEQPKDQSN IHGQNVPKDS FQLDHKCAAI LDVICGAEQT NTGPGAMETN 201 250 ENSP00000298784/1-835 CVPTEYHEIQ NQCLGLFSSN AVDKSRSEAA VRKVSDLKIS TDTEFLSIIT ENSBTAP00000025542/1-906 SAPAEHHEIQ NQCLEFFLAN TGDKPRPEGT VGKASGVKIS TDTEFLSIMT BACU005452/1-872 CAPTEHQEIQ NQCLEFFSSS TVDKPRPEGT VRKVSGLKIS TDTEFLSVMT bmy_16897T0/1-560 CAPTEHQEIQ NQCLEFFSSS TVDKPRPEGT VRKVSGLKIS TDTEFLSVMT ENSTTRP00000007714/1-545 CAPTEHHEIQ NQCRELFSST TVDKPRPEGT VRKVSGLKIS TDTEFLSVMT 251 300 ENSP00000298784/1-835 SSQVAFLAQK KDKRRSPVNK GNVNMETEPK ASYGEIRIPE ENSIQL-DGF ENSBTAP00000025542/1-906 SSQVAFLAQR KYKGQKSINK GTINMEIEPE ANYGEIRITE DNLIQSKDDS BACU005452/1-872 SSQVAFLAQR KYKGQNSVNK GTIKMEIEPE TSHGEIRITE DNLIQPNDDS bmy_16897T0/1-560 SSQVAFLAQR KYKGQNSINK GTIKMEIEPE ASHGEIRITE DNLIQPNDDS ENSTTRP00000007714/1-545 SSQVAFLAQR KCKGQNSINK GTIKMEIEPE ASHGEIRITE DNLIQPNDDS 301 350 ENSP00000298784/1-835 TEAYESGQNQ AYSLELFSPV CPKTENSRIH INSDKGLEEH TGSQELFSSE ENSBTAP00000025542/1-906 AGGNEDGQNQ ACSLELFSPV CPETKSSHTL LNTDKDLEEN IGSQGLFNCD BACU005452/1-872 TEGYEGGQNQ ACSLELFSPV CPETKNSHIL LNTDKGLEEN IGSQELFSFD bmy_16897T0/1-560 TEGYEGGQNQ ACSLELFSPV CPETKNSHIL LNTNKDLEEN IGSQELFSFD ENSTTRP00000007714/1-545 TEGYEGGQNQ ACSLELFS-- -PETKNSHIL LNTDKGLEEN IGSQELFRFD 351 400 ENSP00000298784/1-835 DELPPNEIRI ELCSSGILCS QLNTFHKSAI KRSCTSEDKV GQSEALSRVL ENSBTAP00000025542/1-906 DKFQPNEILI ESCNSGILCS QLNTFCKSSG KRSWTSEDKS GHPQALSEVP BACU005452/1-872 GKLPPNEIRI ESCSSGILCS QLNTFHKSSI KRSWTSEDKS GHPQALSEVP bmy_16897T0/1-560 DKLPPNEVRI ESCSSGILCS QLNTFHKSSI KRSWTSEDKS GHPQALSEVP ENSTTRP00000007714/1-545 DKLTPNEIRI ESCSSGILCS QLNTFHKSSV ERSRTSEDKS GHPQALSEVP 401 450 ENSP00000298784/1-835 QVAK------ ------KMKL ISNGGDSAVE MDRRNVSEFK SIKKTSLIKN ENSBTAP00000025542/1-906 HVAK------ ------KIKL FSNERDHTVT VDRRNMFGFK GIKKTSLIKN BACU005452/1-872 HVAK------ ------KIKL ISNERDHTVT MHQRNVSGFK GIKKTSLIKN bmy_16897T0/1-560 HVAKKIKLIS NERDHTKIKL ISNERDHTVT MHQRNVSGFK GIKKTSLIKN ENSTTRP00000007714/1-545 HVAK------ ------KSKL ISNQRDHTVT VHQRNVSGFK GIKKTSLIKN 451 500 ENSP00000298784/1-835 CDSKSQKYNC LVMVLSPCHV KEINIKFGPN SGSKVPLATV TVIDQSETKK ENSBTAP00000025542/1-906 CDSEHQKYNC LVMVLSPCHM KEINIKSGPN SGSKVPLATI VVTDQSEIKK BACU005452/1-872 CDSESQKYNC LVMVLSPCHV KEINIKSGPN SGSKVPLATI VVIDQSEIKK bmy_16897T0/1-560 CDSESQKYNC LVMVLSPCHV KEINIKSGPN SGSKVPLATI VVIDQSEIKK ENSTTRP00000007714/1-545 CDSESQKYNC LVMVLSPCHV KEINIKSGPN SGSKVPLATI VVIDQSEIKK 501 550 ENSP00000298784/1-835 KVFLWRTAAF WAFTVFLGDI ILLTDVVIHE DQWIGETVLQ STFSSQLLNL ENSBTAP00000025542/1-906 KVFLWRTAAF WALTVFLGDI ILLTDVTIHE DHWVGETVLQ STFTSQLLNL BACU005452/1-872 KVFLWRTAAF WALTVFLGDI ILLTD----- ---------- ---------- bmy_16897T0/1-560 KVFLWRTAAF WALTVFLGDV ILLTDVTIHE DHWVGETVLQ STFTSHLLNL ENSTTRP00000007714/1-545 KVFLWRTAAF WALTVFLGDI ILLTDVTIHE DHWVGETVLQ STFTSHLLNL 551 600 ENSP00000298784/1-835 GSYSSIQPEE YSSVVSEVVL QDLLAYVSSK HSYLRDLPPR QPQRVNSIDF ENSBTAP00000025542/1-906 GSYSSVQPEE YSSMISNVVL QDLLAYVSSK HSYLRDLPQR HPQKMSSIEF BACU005452/1-872 ---------- -SSMVSDIVL QDLLAYVSSK HSYLRDLPRR QLQKMSSIEF bmy_16897T0/1-560 GSYSSVHPEE ---------- ---------- ---------- ---------- ENSTTRP00000007714/1-545 GSYSSVHPEE ---------- ---------- ---------- ---------- 601 650 ENSP00000298784/1-835 VELEHLQPDV LVHAVLRVVD FTILTEAVYS YRGQKQKKVM LTVEQAQDQH ENSBTAP00000025542/1-906 IELEQLQPDI LVHAILRVVD ITVLTEALYS YRGQKQRKVM LTVEQTQGQH BACU005452/1-872 VELEQLQPDV LVHAVLRVVD IIILTEALYS YRGQKQRKVM LTVEQAQGQH bmy_16897T0/1-560 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007714/1-545 ---------- ---------- ---------- ---------- ---------- 651 700 ENSP00000298784/1-835 YALVLWGPGA AWYPQLQRKK ---------- ---------- ---------- ENSBTAP00000025542/1-906 YVLVLWGPGA AWYPQLQRKK GYIWEFKYLF VQRNCILENL ELHTTPWSSC BACU005452/1-872 YVLVLWGPGA AWYPQLQRKK DCIWEFKYLF VQRNCILENL ELHTTPWSSC bmy_16897T0/1-560 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007714/1-545 ---------- ---------- ---------- ---------- ---------- 701 750 ENSP00000298784/1-835 ---------- ---------- ---------- ---------G VVLIKAQISE ENSBTAP00000025542/1-906 ECLFDDDRRA ITFKAKFQKN TPSFVKMSDL ATHLEEKRSG VILMKAQILE BACU005452/1-872 ECLFDDDIRA ITFKAKFQKN TPSFVKMSDL ATHLEDKRSG VILIKAQILE bmy_16897T0/1-560 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007714/1-545 ---------- ---------- ---------- ---------- ---------- 751 800 ENSP00000298784/1-835 LAFPITASQK IALNAHSSLK SIFSSLPNIV YTGCAKCGLE LETDENRIYK ENSBTAP00000025542/1-906 LVFPIAAVQK IALNARSSLK SIFCSLPNII YTGCAKCGLE LQTDENKIYK BACU005452/1-872 LVFPVTASLK IALNAHSSLK IIFSSLPNIV YTGCAKCGLE LETDENKIYK bmy_16897T0/1-560 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007714/1-545 ---------- ---------- ---------- ---------- ---------- 801 850 ENSP00000298784/1-835 QCFSCLPFTM KKIYYRPALM TAIDGRHDVC IRVESKLIEK ILLNISADCL ENSBTAP00000025542/1-906 QCFSCLPFTM KKIYYRPALM TIVDGKYKVC IHVGSKLIEK ILLNISPDWL BACU005452/1-872 QCFSCLPFTM KKKYYRPALM TIVDGIYKVC VHVGSKLIEK ILLNISPDWL bmy_16897T0/1-560 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007714/1-545 ---------- ---------- ---------- ---------- ---------- 851 900 ENSP00000298784/1-835 NRVIVPSSEI TYGMVVADLF HSLLAVSAEP CVLKIQSLFV LDENSYPLQQ ENSBTAP00000025542/1-906 NRVIAPPSDV TYGMAAADLL HALLAGSGAP CVLKVQSLFV LDENSYPLQQ BACU005452/1-872 NRVIAPPSDV TYDLVAADLL HALLAGSGAP CVLKVQSLFV LDENSYPLQQ bmy_16897T0/1-560 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007714/1-545 ---------- ---------- ---------- ---------- ---------- 901 950 ENSP00000298784/1-835 DFSLLDFYPD IVKHGANARL ENSBTAP00000025542/1-906 DFSLLDFYLN DLKHASHALL BACU005452/1-872 DFSLLDFYPD DMKHGSHALL bmy_16897T0/1-560 ---------- ---------- ENSTTRP00000007714/1-545 ---------- ----------