KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:26:39 2014 Check: 00 .. Name: ENSTTRP00000013630/1-260 Len: 367 Check: 8909 Weight: 1.00 Name: bmy_17741T0/1-315 Len: 367 Check: 1809 Weight: 1.00 Name: ENSBTAP00000025560/1-354 Len: 367 Check: 5080 Weight: 1.00 Name: ENSP00000380054/1-268 Len: 367 Check: 4843 Weight: 1.00 Name: BACU020201/1-253 Len: 367 Check: 7455 Weight: 1.00 // 1 50 ENSTTRP00000013630/1-260 ---------- ---------- ---------- ---------- ---------- bmy_17741T0/1-315 ---------- ---------- ---------- --------TF RRRRPGLASG ENSBTAP00000025560/1-354 MAPPPLLPLG ARKSLLGAGS SAVRSPQSRP PPRRVGPSSF PACAGGCRLG ENSP00000380054/1-268 ---------- ---------- ---------- ---------- ---------- BACU020201/1-253 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000013630/1-260 ---------- ---------- ---------- ---------- -------MNG bmy_17741T0/1-315 RGWLPARIPA RPGTLSRERG SLGRRYRQLG PRARQEGTGA GARPGGAMNG ENSBTAP00000025560/1-354 SPRAPERCPG SAAPPDAGAG GSGRGRARRA P-------GR ARGPCGAMNG ENSP00000380054/1-268 ---------- ---------- ---------- ---------- -------MNG BACU020201/1-253 ---------- ---------- ---------- ---------- -------MNG 101 150 ENSTTRP00000013630/1-260 TANPLLDREE HCLRLGESFE KRPRTSFHTI RYDFKPASID TSCEGELQVG bmy_17741T0/1-315 TANPLLDREE HCLRLGESFE KRPRASFHTI RYDFKPASID TSCEGELQVG ENSBTAP00000025560/1-354 TANPLLDREE HCLRLGESFE KRPRASFHTI RYDFKPASID TSCEGELQVG ENSP00000380054/1-268 TANPLLDREE HCLRLGESFE KRPRASFHTI RYDFKPASID TSCEGELQVG BACU020201/1-253 TANPLLDREE HCLRLGESFE KRPRASFHTI RYDFKPASID TSCEGELQVG 151 200 ENSTTRP00000013630/1-260 KGDEVTITLP HIPGSTPPMT VFKGNKRPYQ KDCVLIINHD TGEYVLEKLS bmy_17741T0/1-315 KGDEVTITLP HIPGSTPPMT VFKGNKRPYQ KDCVLIINHD TGEYVLEKLS ENSBTAP00000025560/1-354 KGDEVTITLP HIPGSTPPMT VFKGNKRPYQ KDCVLIINHD TGEYVLEKLS ENSP00000380054/1-268 KGDEVTITLP HIPGSTPPMT VFKGNKRPYQ KDCVLIINHD TGEYVLEKLS BACU020201/1-253 KGDEVTITLP HIPGSTPPMT VFKGNKRPYQ KDCVLIINHD TGEYVLEKLS 201 250 ENSTTRP00000013630/1-260 SSIQVKKTRA EGSSRIQARM EQQPARPPQP SQPPPPPPPV PFRAPTKPPV bmy_17741T0/1-315 SSIQVKKT-- ---SFLLRGL RFKPACL--- --PSKGPYGT PFKALKEENY ENSBTAP00000025560/1-354 SSIQVKKTRA EGSSKIQARM EQQPPRPPQP SQPPPPP-PM SFRAPTKPPA ENSP00000380054/1-268 SSIQVKKTRA EGSSKIQARM EQQPTRPPQT SQPPPPPPPM PFRAPTKPPV BACU020201/1-253 SSIQVKKTRA EGSSRIQARM EQQPARPPQP SQPPPPPPPV PFRAPTKPPV 251 300 ENSTTRP00000013630/1-260 GPKTSPLKDN PSPEPQLDDI KRELRAEVDX XXXXXXXXXX XXXXXXXXXX bmy_17741T0/1-315 KVRKYD-SSW DTGDTGLEGL -RELRAEVDI IEQMSSSSGS SSSDSESSSG ENSBTAP00000025560/1-354 GPKTSPLKDN PSPEPQLDDI KRELRAEVDI IEQMSSSSGS SSSDSESSSG ENSP00000380054/1-268 GPKTSPLKDN PSPEPQLDDI KRELRAEVDI IEQMSSSSGS SSSDSESSSG BACU020201/1-253 GPKTSPLKDN PSPEPQLDDI KRELRAEVDI IEQMSSSSGS SSSDSESSSG 301 350 ENSTTRP00000013630/1-260 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX PAK------- ---GSIQLMC bmy_17741T0/1-315 SDDDSSSSAG EDSGPVSPPQ PSHQQPYNSR PAVANGTG-- RPQGSNQLMS ENSBTAP00000025560/1-354 SDDDSSSSGG EDSGPASPPQ PC-----GGR PAVANGTGAA RPPGSTQLMS ENSP00000380054/1-268 SDDDSSSSGG EDNGPASPPQ PSHQQPYNSR PAVANGTS-- RPQGSNQLMN BACU020201/1-253 SDDDSSSSGG EDSGPVSPPQ PSHQQPYNSR PAVANGTG-- RPQGSNQLMS 351 400 ENSTTRP00000013630/1-260 TLRNDLQLSE SGSDSDD bmy_17741T0/1-315 TLRNDLQLSE SGSDSDD ENSBTAP00000025560/1-354 TLRNDLQLSE SGSDSDD ENSP00000380054/1-268 TLRNDLQLSE SGSDSDD BACU020201/1-253 TL-------- -------