KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 4 Type: P Thu May 15 17:26:41 2014 Check: 00 ..
Name: ENSP00000261601/1-494 Len: 494 Check: 5139 Weight: 1.00
Name: ENSBTAP00000025580/1-494 Len: 494 Check: 6072 Weight: 1.00
Name: ENSTTRP00000015798/1-422 Len: 494 Check: 7871 Weight: 1.00
Name: bmy_03995T0/1-417 Len: 494 Check: 5335 Weight: 1.00
//
1 50
ENSP00000261601/1-494 MPLYSVTVKW GKEKFEGVEL NTDEPPMVFK AQLFALTGVQ PARQKVMVKG
ENSBTAP00000025580/1-494 MPLYSVTVKW GKEKFEGVEL NTDEPPMVFK AQLFALTGVQ PARQKVMVKG
ENSTTRP00000015798/1-422 ---------- ---MMGSADA LPEEP----- ---------- ----------
bmy_03995T0/1-417 MPLYSVTVKW GKEKFEGVEL NTDEPPMVFK AQLFALTGVQ PARQKVMVKG
51 100
ENSP00000261601/1-494 GTLKDDDWGN IKIKNGMTLL MMGSADALPE EPSAKTVFVE DMTEEQLASA
ENSBTAP00000025580/1-494 GTLKDDDWGN IKMKNGMTVL MMGSADALPE EPSAKTVFVE DMTEEQLASA
ENSTTRP00000015798/1-422 ---------- ---------- ---------- --SAKTV-VE DMTEEQLASA
bmy_03995T0/1-417 GTLK------ ---------- ---------- ---------- ----------
101 150
ENSP00000261601/1-494 MELPCGLTNL GNTCYMNATV QCIRSVPELK DALKRYAGAL RASGEMASAQ
ENSBTAP00000025580/1-494 MELPCGLTNL GNTCYMNATV QCIRSVPELK DALKRYAGAL RASGEMASAQ
ENSTTRP00000015798/1-422 MELPCGLTNL GNTCYMNATV QCIRSV-ELK DALKRYAGAL RASGEMASAQ
bmy_03995T0/1-417 MELPCGLTNL GNTCYMNATV QCIRSVPELK DALKRYAGAL RASGEMASAQ
151 200
ENSP00000261601/1-494 YITAALRDLF DSMDKTSSSI PPIILLQFLH MAFPQFAEKG EQGQYLQQDA
ENSBTAP00000025580/1-494 YITAALRDLF DSMDKTSSSI PPIILLQFLH MAFPQFAEKG EQGQYLQQDA
ENSTTRP00000015798/1-422 YITAALRDLF DSMDKTSSSI PPIILLQFLH MAFPQFAEKG EQGQYLQQDA
bmy_03995T0/1-417 YITAALRDLF DSMDKTSSSI PPIILLQFLH MAFPQFAEKG EQGQYLQQDA
201 250
ENSP00000261601/1-494 NECWIQMMRV LQQKLEAIED DSVKETDSSS ASAATPSKKK SLIDQFFGVE
ENSBTAP00000025580/1-494 NECWVQMMRV LQQKLEAIED DTVKETDSSS ASAVTPSKKK SLIDQFFGVE
ENSTTRP00000015798/1-422 NECWIQMMRV LQQKLEAIED DTVKETDSSS VPAVTPSKKK SLIDQFFGVE
bmy_03995T0/1-417 NECWIQMMRV LQQKLEAVED DTVKETDSSS APAVTPSKKK SLIDQFFGVE
251 300
ENSP00000261601/1-494 FETTMKCTES EEEEVTKGKE NQLQLSCFIN QEVKYLFTGL KLRLQEEITK
ENSBTAP00000025580/1-494 FETTMKCTES EEEEVTKGKE SQLQLSCFIN QEVKYLFTGL KLRLQEEITK
ENSTTRP00000015798/1-422 FETTMKCTES EEEEVSKGKE SQLQLSCFIN QEVKYLFTGL KLRLQEEITK
bmy_03995T0/1-417 FETT------ ---------- ---------- ----YPYEP- RLRLQEEITK
301 350
ENSP00000261601/1-494 QSPTLQRNAL YIKSSKISRL PAYLTIQMVR FFYKEKESVN AKVLKDVKFP
ENSBTAP00000025580/1-494 QSPTLQRNAL YIKSSKISRL PAYLTIQMVR FFYKEKESVN AKVLKDVKFP
ENSTTRP00000015798/1-422 QSPTLQRNAL YIKSSKISRL PAYLTIQMVR FFYKEKESVN AKVLKDVKFP
bmy_03995T0/1-417 QSPTLQRNAL YIKSSKISRL PAYLTIQMVR FFYKEKESVN AKVLKDVKFP
351 400
ENSP00000261601/1-494 LMLDMYELCT PELQEKMVSF RSKFKDLEDK KVNQQPNTSD KKSSPQKEVK
ENSBTAP00000025580/1-494 LMLDVYELCT PELQEKMVSF RSKFKDLEDK KVNQQPKTGD KDSSPQKEVK
ENSTTRP00000015798/1-422 LMLDVYELCT PELQEKMISF RSKFKDLEDK KVNHQPKTSD KKSSPPKEVK
bmy_03995T0/1-417 LMLDVYELCT PELQEKMISF RSKFKDLEDK KINQQPKTSD KKSSPPKEVK
401 450
ENSP00000261601/1-494 YEPFSFADDI GSNNCGYYDL QAVLTHQGRS SSSGHYVSWV KRKQDEWIKF
ENSBTAP00000025580/1-494 YEPFSFADDI GSNNCGYYDL QAVLTHQGRS SSSGHYVSWV KRXXDEWIKF
ENSTTRP00000015798/1-422 YEPFSFADDI GSNNCGYYDL QAVLTHQGRS SSSGHYVSWV KRKQDEWIKF
bmy_03995T0/1-417 YEPFSFADDI GSNNCGYYDL QAVLTHQGRS SSSGHYVSWV KRKQDEWIKF
451 500
ENSP00000261601/1-494 DDDKVSIVTP EDILRLSGGG DWHIAYVLLY GPRRVEIMEE ESEQ
ENSBTAP00000025580/1-494 DDDKVSIVTP EDILRLSGGG DWHIAYVLLY GPRRVEIMEE ESEQ
ENSTTRP00000015798/1-422 DDDKVSIVTP EDILRLSGGG DWHIAYVLLY GPRRIEIMEE ESEQ
bmy_03995T0/1-417 DDDKVSIVTP EDILRLSGGG DWHIAYVLLY GPRRIEIMEE ESEQ