KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:26:47 2014 Check: 00 .. Name: ENSP00000352779/1-492 Len: 666 Check: 5070 Weight: 1.00 Name: ENSBTAP00000025599/1-490 Len: 666 Check: 2809 Weight: 1.00 Name: ENSTTRP00000012094/1-528 Len: 666 Check: 7824 Weight: 1.00 Name: bmy_00943T0/1-666 Len: 666 Check: 1724 Weight: 1.00 Name: BACU001985/1-250 Len: 666 Check: 6646 Weight: 1.00 // 1 50 ENSP00000352779/1-492 ---------- ---------- ---------- ---------- MKLLLLHPAF ENSBTAP00000025599/1-490 ---------- ---------- ---------- ---------- --MELLRPAL ENSTTRP00000012094/1-528 ----LCAGAP TLLLLLRAAR GPVVRVRRAV ASAQLXXXPH VTMKLLHPAL bmy_00943T0/1-666 MEVGLGNRCA SAMFVSGALD LTFRVPFLGP EESERENASP VTMKLLHPAL BACU001985/1-250 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000352779/1-492 QSCLLLTLLG LWRTTPEAHA SSLGAPAISA ASFLQDLIHR YGEGDSLTLQ ENSBTAP00000025599/1-490 PSYFLLTLLS IWTAASEARA VSTGMPTISA ASFLQNLMHR YGEGDSLTLQ ENSTTRP00000012094/1-528 PNCLLLALLA VWTAAPEAHA VSVGTPAISA ASFLQNLMHR YGEGDSLTLQ bmy_00943T0/1-666 PSCLLLALLG VWTAAPEAHA VSVGTPAISA ASFLQNLMHR YGEGDSLTLQ BACU001985/1-250 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000352779/1-492 QLKALLNHLD VGVGRGNVTQ HVQGHRNLST CFSSGDLFTA HNFSEQSRIG ENSBTAP00000025599/1-490 QLKALLNHLD VGVGRGNISQ PVQGPRNLST CFSSGELFAA HNLSHQSQIG ENSTTRP00000012094/1-528 QLKALLNHLD VGVGRDNVSQ SVQGPRNLST CFSSGDLFAA HNLSDQLRIG bmy_00943T0/1-666 QLKALLNHLD VGVGRDNVSQ SVQGPRNLST CFSSGDLFAA HNLSDQLRIG BACU001985/1-250 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000352779/1-492 SSELQEFCPT ILQQLDSRAC TSENQENEEN EQTEEGRPSA V--------- ENSBTAP00000025599/1-490 EREFQEFCPT ILQQLDSRAC SSENQENEEN EQTEEGRPSS V--------- ENSTTRP00000012094/1-528 GREFQEFCPT ILQQLDSRAC SSENQENEEN EQTEEGRPSS V--------- bmy_00943T0/1-666 GREFQEFCPT ILQQLDSRAC SSENQENEEN EQAEEGRPSS VEARVPPPSV BACU001985/1-250 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000352779/1-492 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025599/1-490 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012094/1-528 ---------- ---------- ---------- ---------- ---------- bmy_00943T0/1-666 MEALVCSCSS TVWGFGFLSV SLINLASLLG VLVLPCTEKA FFSRVLTYFI BACU001985/1-250 ---------- ---------- ---------- ---------- ---------- 251 300 ENSP00000352779/1-492 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025599/1-490 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012094/1-528 ---------- ---------- ---------- ---------- ---------- bmy_00943T0/1-666 ALSIGTLLSN ALFQLIPEGW KGKQLVVAIP ALGPPDPLSV LSRGPGRTQV BACU001985/1-250 ---------- ---------- ---------- ---------- ---------- 301 350 ENSP00000352779/1-492 ---------- ---------- -----EVWGF GFLSVSLINL ASLLGVLVLP ENSBTAP00000025599/1-490 ---------- ---------- -----EVWGY GLLCVTVISL CSLLGASVVP ENSTTRP00000012094/1-528 ---------- ---------- -----EVWGY GLLCVTVISL CSLMGASVVP bmy_00943T0/1-666 WPPRDDPPGM RWKERGYRLK SCIDLEIWGY GLLCVTVISL CSLMGASVVP BACU001985/1-250 ---------- ---------- ---------- ---------- ---------- 351 400 ENSP00000352779/1-492 CTEKAFFSRV LTYFIALSIG TLLSNALFQL IPEAFGFNPL EDYYVSKSAV ENSBTAP00000025599/1-490 FMKKTFYKRL LLYFIALAIG TLYSNALFQL IPEAFGFNPM EDYYVSKSAV ENSTTRP00000012094/1-528 FMKKTFYKRL LLYFIALAIG TLYSNALFQL IPEAFGFNPL EDYYVSKSAV bmy_00943T0/1-666 FMKKTFYKRL LLYFIALAIG TLYSNALFQL IPEAFGFNPL EDYYVSKSAV BACU001985/1-250 ---------- ---------- ---------- ---------- ---------- 401 450 ENSP00000352779/1-492 VFGGFYLFFF TEKILKILLK QKNEHHHGHS HYASESLPSK KDQEEGVMEK ENSBTAP00000025599/1-490 VFGGFYLFFF TEKILKMLLK QKNEHHHGHS HYTSETLPSQ KDQEEGVTEK ENSTTRP00000012094/1-528 VFGGFYLFFF TEKVLKMLLK QKNEHHHGHS HYASETLPSQ KDQEEGVTEK bmy_00943T0/1-666 VFGGFYLFFF TEKVLKMLLR QKNEHHHGHS HYASETLPSQ KDQEEGVTEK BACU001985/1-250 ---------- ------MLLR QKNEHHHGHS HYASETLPSQ KDQEEGVTEK 451 500 ENSP00000352779/1-492 LQNGDLDHMI PQHCSSELDG KAPMVDEKVI VGSLSVQDLQ ASQSACYWLK ENSBTAP00000025599/1-490 LQNGDLDHMI PQHCSGELDG KTPVVDEKVI VGSLSVQDLQ ASQSACHWLK ENSTTRP00000012094/1-528 LQNGDLDHMI SQRCSGELDG KAPVMDEKVI VGSLSVQDLQ ASQSACYWLK bmy_00943T0/1-666 LQNGDLDHMI PQRCSGELDG KAPVMDEKVI VGSLSVQDLQ ASQSACYWLK BACU001985/1-250 LQNGDLDHMI PQRCSGELDG KGPVMDEKVI VGSLSVQDLQ ASQSACYWLK 501 550 ENSP00000352779/1-492 GVRYSDIGTL AWMITLSDGL HNFIDGLAIG ASFTVSVFQG ISTSVAILCE ENSBTAP00000025599/1-490 GVRYSDIGTL AWMITLSDGL HNFIDGLAIG ASFTVSVFQG ISTSVAILCE ENSTTRP00000012094/1-528 GVRYSDIGTL AWMITLSDGL HNFIDGLAIG ASFTVSVFQG ISTSVAILCE bmy_00943T0/1-666 GVRYSDIGTL AWMITLSDGL HNFIDGLAIG ASFTVSVFQG ISTSVAILCE BACU001985/1-250 GVRYSDIGTL AWMITLSDGL HNFIDGLAIG ASFTVSVFQG ISTSVAILCE 551 600 ENSP00000352779/1-492 EFPHELGDFV ILLNAGMSIQ QALFFNFLSA CCCYLGLAFG ILAGSHFSAN ENSBTAP00000025599/1-490 EFPHELGDFV ILLNAGMSLQ QALFFNFLSA CCCYVGLGFG ILAGSHFSAN ENSTTRP00000012094/1-528 EFPHELGDFV ILLNAGMSIQ QALFFNFLSA CCCYVGLAFG ILAGSHFSAN bmy_00943T0/1-666 EFPHELGDFV ILLNAGMSIQ QALFFNFLSA CCCYVGLGFG ILAGSHFSAN BACU001985/1-250 EFPHELGDFV ILLNAGMSIQ QALFFNFLSA CCCYVGLAFG ILAGSHFSAN 601 650 ENSP00000352779/1-492 WIFALAGGMF LYISLADMFP EMNEVCQEDE RKGSILIPFI IQNLGLLTGF ENSBTAP00000025599/1-490 WIFALAGGMF LYISLADMFP EMNEVSQEDE RKGSALIPFV IQNLGLLTGF ENSTTRP00000012094/1-528 WIFALAGGMF LYISLADMFP EMNEVCQEDE RNGSVLIPFV IQNVGLLTGF bmy_00943T0/1-666 WIFALAGGMF LYISLADMFP EMNEVCQEDE RKGSVLIPFV IQNLGLLTGF BACU001985/1-250 WIFALAGGMF LYISLADMFP EMNEVCQEDE RKGSVLIPFA IQNLGLLTGF 651 700 ENSP00000352779/1-492 TIMVVLTMYS GQIQIG ENSBTAP00000025599/1-490 GIMLVLTMYS GHIQIG ENSTTRP00000012094/1-528 SIMLVLTMYS GQIQIG bmy_00943T0/1-666 GIMLVLTMYS GQIQIG BACU001985/1-250 SIMLVLTMYS GQIQIG