KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:26:47 2014 Check: 00 .. Name: ENSP00000296529/1-345 Len: 348 Check: 3483 Weight: 1.00 Name: ENSBTAP00000025604/1-348 Len: 348 Check: 7637 Weight: 1.00 Name: ENSTTRP00000009420/1-348 Len: 348 Check: 311 Weight: 1.00 Name: bmy_22043T0/1-318 Len: 348 Check: 9905 Weight: 1.00 Name: BACU019638/1-348 Len: 348 Check: 5658 Weight: 1.00 // 1 50 ENSP00000296529/1-345 MSNNGADLTF GYISCFVAIL LFGSNFVPLK KFDTGDGMFL QWVLCAAIWL ENSBTAP00000025604/1-348 MSSNATDLTT GFIASIVAIV LFGSNFVPLK KYETGDGMFL QWVLCAAIWL ENSTTRP00000009420/1-348 MSNNGTDLTT GFISSIVAIL LFGSNFVPLK KYETGDGMFL QWVLCAAIWL bmy_22043T0/1-318 MSNNGTDLTT GFISSIAAIL LFGSNFVPLK KYETGDGMFL QWVLCAAIWF BACU019638/1-348 MSNNGTDLTT GFISSIAAIL LFGSNFVPLK KYETGDGMFL QWVLCAAIWL 51 100 ENSP00000296529/1-345 VALVVNLILH CPKFWPFAML GGCIWATGNI AVVPIIKTIG LGLGILIWGS ENSBTAP00000025604/1-348 VALVVNLILH CPKFWPFAMV GGCIWATGNI AVVPIIKTIG LGLGILIWGS ENSTTRP00000009420/1-348 VALVVNLILY CPKFWPFAMV GGCIWATGNI AVVPIIKTIG LGLGILIWGS bmy_22043T0/1-318 VALVVNLILH CPKFWPFAMV GGCIWATGNI AVVPIIKTI- ---------- BACU019638/1-348 FALVVNLILH CPKFWPFAMV GGCIWATGNI AVVPIIKTIG LGLGILIWGS 101 150 ENSP00000296529/1-345 FNALTGWASS RFGWFGLDAE EVSNPLLNYI GAGLSVVSAF IFLFIKSEIP ENSBTAP00000025604/1-348 FNALTGWASS RFGWFGMDAE EVAKPVLNYI GAGLSVVSAF IFLFIKSEIP ENSTTRP00000009420/1-348 FNALIGWASS RFGWFGMDAE EVSKPLLNYI GAGLSVVSAF IFLFIKSKIP bmy_22043T0/1-318 ---------- ---------E EVSKPLLNYI GAGLSVVSAF IFLFIKSKIP BACU019638/1-348 FNTLIGWASS RFGWFGMDAE EVSKPLLNYI GAGLSVVSAF IFLFIKSKIP 151 200 ENSP00000296529/1-345 NNTCSMDTTP LITEHVINTT QDP---CSWV DKLSTVHHRI VGCSLAVISG ENSBTAP00000025604/1-348 NNTYSVDTTP LISEHVINKT QDPDPDCSWV DKLSTAQSHL VGCSLAVISG ENSTTRP00000009420/1-348 NTTYSVDTTP LITEHVVNKT QDPDPEHSWV DKLSTVQNRL VXXXXXXXXX bmy_22043T0/1-318 NNTYSVDTTP LITEHVINKT QDPDPDYSWV DKLSTVQNRL VGCSLAVISG BACU019638/1-348 NNTYSVDTTP LITEHVINKT QDPDPDYSWV DKLSTVQNRL VGCSLAVISG 201 250 ENSP00000296529/1-345 VLYGSTFVPI IYIKDHSKRN DSIYAGASQY DLDYVFAHFS GIFLTSTVYF ENSBTAP00000025604/1-348 ILYGSTFVPI IYIKDHSKRN DSIYAGASQN DLDYVFAHFS GIFLTSTVYF ENSTTRP00000009420/1-348 XLYGSTFVPI IYIKDHSKRN DSIYAGASQN DLDYVFAHFS GIFLASTVYF bmy_22043T0/1-318 ILYGSTFVPI IYIKDHSKRN DSIYAGASQN DLDYVFAHFS GIFLASTVYF BACU019638/1-348 ILYGSTFVPI FYIKDHSKRN DSIYAGASQN DLDYVFAHFS GIFLASTVYF 251 300 ENSP00000296529/1-345 LAYCIAMKNS PKLYPEAVLP GFLSGVLWAI ATCCWFIANH SLSAVVSFPI ENSBTAP00000025604/1-348 LAYCVAMKNN PKLHPEAVLP GFLSGVLWAI ATCCWFIANR SLSAVVSFPI ENSTTRP00000009420/1-348 LAYCIAMKNN PKLYPKAVLP GFLSGILWAI ATCCWFVANH SLSAVVSFPI bmy_22043T0/1-318 LAYCIAMKNN PKLYPKAVLP GFLSGILWAI ATCCWFIANH SLSAVVSFPI BACU019638/1-348 LAYCIAMKNN PKLYPKAVLP GFLSGILWAI ATCCWFIANH SLSAVVSFPI 301 350 ENSP00000296529/1-345 ITAGPGFIAA MWGIFMFKEI KGLQNYLLMI LAFCIILTGA LCTAFSKI ENSBTAP00000025604/1-348 ITAGPGFIAT MWGVFMFKEI QGRKNYLLMM LAFCIILTGA LCTAFSKI ENSTTRP00000009420/1-348 ITAGPGFIAA MWGVFMFKEI QGRQNYLLMI LAFCIILAGA LCTAFSKI bmy_22043T0/1-318 ITAGPGFIAA MWGVFMFKEI QGRQNYLLMI LAFCIILAGA LCTAFSKI BACU019638/1-348 ITAGPGFIAA MWGVFMFKEI QGRQNYLLMI LAFCIILAGA LCTAFSKI