KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:26:48 2014 Check: 00 .. Name: ENSBTAP00000025607/1-417 Len: 479 Check: 9556 Weight: 1.00 Name: ENSTTRP00000013910/1-448 Len: 479 Check: 2814 Weight: 1.00 Name: bmy_08105T0/1-420 Len: 479 Check: 324 Weight: 1.00 Name: BACU009949/1-344 Len: 479 Check: 7143 Weight: 1.00 // 1 50 ENSBTAP00000025607/1-417 MKATRDHASA PFCTRFNHSD PGIWAAERAV EAPNNLTLPP EPSEDCGSVS ENSTTRP00000013910/1-448 MKETRGHESS PSCTRLNQSY TGIWAPQRSA ETRSNLTRPV GPGEDFGSVS bmy_08105T0/1-420 ---------- ---------- ---------- ---------- ---------- BACU009949/1-344 ---------- ---MRLNHSY PGIWAPERSA EARSNLTRPA GPGEDCGSVS 51 100 ENSBTAP00000025607/1-417 VAFSMTMMIT GFVGNALAIT LVSKSYRRRE GKRKKSFLLC IGWLALTDMV ENSTTRP00000013910/1-448 VAFPMTMLIT GFVGNALAML LVSQSYRRRE SKRKKSFLLC IGWLALTDLV bmy_08105T0/1-420 ----MTMLIT GFVGNALAML LVSQSYRRRE SKRKKSFLLC IGWLALTDLV BACU009949/1-344 VAFPMTMLIT GFVGNALAML LVSQSYRRRE SKRKKSFLLC IGWLALTDLV 101 150 ENSBTAP00000025607/1-417 GQLLTSPVVI VLYLSHQRWE QLDPSGRLCT FFGLTMTVFG LSSLFIASAM ENSTTRP00000013910/1-448 GQLLTSPVVI VLYLSHQRWE QLDPSGRLCT FFGLIMTVFG LSSLFIASAM bmy_08105T0/1-420 GQLLTSPVVI VLYLSHQRWE QLDPSGRLCT FFGLTMTVFG LSSLFIASAM BACU009949/1-344 GQLLTSPVVI VLYLSHQRWE QLDPSGRLCT FFGLTMTVFG LSSLFIASAM 151 200 ENSBTAP00000025607/1-417 AVERALATRA PHWYSSHMKT SVTRAVLLGV WLAVLAFALL PVLGVGQYTI ENSTTRP00000013910/1-448 AVERALATRA PHWYSSHMKT SSTRAVLLGV WLAVLAFALL PVLGVGQYTI bmy_08105T0/1-420 AVERALATRA PHWYSSHMKT SATRSVLLGV WLAVLAFALL PVLGVGQYTI BACU009949/1-344 AVERALATRA PHWYSSHMKT SATRAVLLGV WLAVLAFALL PVLGVGQYTI 201 250 ENSBTAP00000025607/1-417 QWPGTWCFIS TGPGGNGTNS RQNWGNVFFA SAFAILGLSA LVVTFACNLA ENSTTRP00000013910/1-448 QCPGTWCFIN TGAGGNGTSP SHNRGNIFFA SSFAFLGLSA LAVTFACNLA bmy_08105T0/1-420 QWPGTWCFIS TGAGGNGTSP SHNWGNMFFA SSFAFLGLSA LAVTFACNLA BACU009949/1-344 QWPGTWCFIS TGAGGNGTSP SHNWGNIFFA SSFAFLGLSA LAVTFACNLA 251 300 ENSBTAP00000025607/1-417 TIKALVSRCR AKATASQSSA QWGRITTETA IQLMGIMCVL SVCWSPLL-- ENSTTRP00000013910/1-448 TIKALVSRCR AKATASQSSA QWGRITTETA IQLMGIMCVL SVCWSPLL-- bmy_08105T0/1-420 TIKALVSRCR AKATASQSSA QWGRITTETA IQLMGIMCVL SVCWSPLLTL BACU009949/1-344 TIKALVSRCR AKATASQSSA QWGRITTETA IQLMGIMCVL SVCWSPLL-- 301 350 ENSBTAP00000025607/1-417 -------IMM LKMIFNHTSV EHCKTYTENQ DECNFFLIAV RLASLNQILD ENSTTRP00000013910/1-448 -------IMM LKMIFNHTSV EHCKSSTEKQ KECSFFLTAV RLASLNQILD bmy_08105T0/1-420 YAFSSHKNIK LKINSTCHHI KEKKFVVSKI ETLQSTIENV KLSTVIHSPS BACU009949/1-344 ---------- ---------- ---------- ---------- -----VGSPR 351 400 ENSBTAP00000025607/1-417 PWVYLLLRKI LLQKFCQLLK G--------- --HSYGLDTE GGTEN--KDK ENSTTRP00000013910/1-448 PWVYLLLRKI LLQKFCQVAN AVSSCCNNGK KVQMISLSNE ITQTEALRKR bmy_08105T0/1-420 SPP---VAIT LLHSLSSGML SPTQLPVQET VTHDIKFQDR TSSSKTINRL BACU009949/1-344 AW-------- ---------- ---------- -------GVR GGSVRAGGQW 401 450 ENSBTAP00000025607/1-417 EMKENLYISN LSRFFILLGH FTEARRGRGH IYLHTLEHQ- ---------- ENSTTRP00000013910/1-448 SLKEQAPFLL PTPAVISPPR FYAQPQIFAL FPLVTLSYPW SPLANLKHFE bmy_08105T0/1-420 RICLDPEHLL VIKFCCRSIS GSAGISSDIR SLVFSLNLIL G--CKQQNLI BACU009949/1-344 RL---LEMAA PAGMCLQAQN FGEGSACAIL VAASELSSSL T--------- 451 500 ENSBTAP00000025607/1-417 ---------- ---------- --------- ENSTTRP00000013910/1-448 GPSSQLC--- ---------- --------- bmy_08105T0/1-420 PSTKGLCEKD IGGKAGRPES KKSLNLTEP BACU009949/1-344 ------C--- ---------- ---------