KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:26:48 2014 Check: 00 .. Name: bmy_00857T0/1-356 Len: 546 Check: 6508 Weight: 1.00 Name: ENSP00000283147/1-513 Len: 546 Check: 183 Weight: 1.00 Name: BACU005133/1-287 Len: 546 Check: 7997 Weight: 1.00 Name: ENSTTRP00000015103/1-304 Len: 546 Check: 6844 Weight: 1.00 Name: ENSBTAP00000025614/1-496 Len: 546 Check: 5126 Weight: 1.00 // 1 50 bmy_00857T0/1-356 ---------- ---------- ---------- -------MAG GDV------- ENSP00000283147/1-513 MPGLGRRAQW LCWWWGLLCS CCGPPPLRPP LPAAAAAAAG GQLLGDGGSP BACU005133/1-287 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015103/1-304 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025614/1-496 --MLGRTAQW LCWWWGLLCS FCGPPPL--- ---PAAAAAG GALLGDGGSP 51 100 bmy_00857T0/1-356 ---------- ---------- ---------- ---------- ---------- ENSP00000283147/1-513 GRTEQPPPSP QSSSGFLYRR LKTQEKREMQ KEILSVLGLP HRPRPLHGLQ BACU005133/1-287 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015103/1-304 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025614/1-496 GHAERPPPPQ TSSSGFLYRR LKTHEKREMQ KEILSVLGLP HRPRPLHGLP 101 150 bmy_00857T0/1-356 ---------- ---------- ---------- ---------- ---------- ENSP00000283147/1-513 QPQPPALRQQ EEQQQQQQLP RGEPPPGRLK SAPLFMLDLY NALSADNDED BACU005133/1-287 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015103/1-304 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025614/1-496 QPPV------ --FPQQQQPA RGEPPPGRLK SAPLFMLDLY NALSADDEED 151 200 bmy_00857T0/1-356 ---------- ---------- ---PPADSVQ QLSKRRVATP TA-------- ENSP00000283147/1-513 GASEGERQQS WPHEAASSSQ RRQPPPGAAH PLNRKSLLAP GSGSGGASPL BACU005133/1-287 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015103/1-304 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025614/1-496 GASDEERRQP GQRGGADASQ PRSPSSGAAH PLGSGSLLAT GPG-GGASPL 201 250 bmy_00857T0/1-356 --------WN LEKMTIALPS NSEPLKVVPV EPSGRNGLGE FASKGPSVAH ENSP00000283147/1-513 TSAQDSAFLN DADMVMSFVN LVEYDKEFS- -PRQRHH-KE FKFNLSQIPE BACU005133/1-287 ---------- MTRLTLT-TN DVEDDKEFS- -PRQRHH-KE FKFNLSQIPE ENSTTRP00000015103/1-304 ---------- DADMVMSFVN LVEDDKEFS- -PRQRHH-KE FKFNLSQIPE ENSBTAP00000025614/1-496 TSAQDSAFLN DADMVMSFVN LVEYDKEFS- -PRQRHH-KE FKFNLSQIPE 251 300 bmy_00857T0/1-356 SGAGTDLKLS VHMGNAAALT VGHAEALIKR TDDYLEIGCE SCLLLSQELT ENSP00000283147/1-513 GEVVTAAEFR IYKDCVMG-S FKNQTFLISI YQ-------- --VLQEHQHR BACU005133/1-287 GEAVTAAEFR IYKDCVVG-S FKNQTFLVGI YQ-------- --VLQEQQHR ENSTTRP00000015103/1-304 GEAVTAAEFR IYKDCVVGTS FKNQTFLVGI YQ-------- --VLQEQQHR ENSBTAP00000025614/1-496 GEAVTAAEFR IYKDCVVG-S FKNQTFLISI YQ-------- --VLQEHQHR 301 350 bmy_00857T0/1-356 DSDLFLLDTR AVWASEEGWL EFDITATSNL WVLTPQHNMG LQLSVVTRDG ENSP00000283147/1-513 DSDLFLLDTR VVWASEEGWL EFDITATSNL WVVTPQHNMG LQLSVVTRDG BACU005133/1-287 DSDLFLLDTR AVWASEEGWL EFDITATSNL WVLTPQHNMG LQLSVVTRDG ENSTTRP00000015103/1-304 DSDLFLLDTR AVWASEEGWL EFDITATSNL WVLTPQHNMG LQLSVVTRDG ENSBTAP00000025614/1-496 DSDLFLLGTR AVWASEAGWL EFDITATSNL WVLTPQHNMG LQLSVVTRDG 351 400 bmy_00857T0/1-356 ESAELGPRVV GLRFLRGRRL DINPRAAGLV GRDGPYDKQP FMVAFFKASE ENSP00000283147/1-513 ---------- ---------V HVHPRAAGLV GRDGPYDKQP FMVAFFKVSE BACU005133/1-287 ---------- ---------L DINPRAAGLV GRDGPYDKQP FMVAFFKASE ENSTTRP00000015103/1-304 ---------- ---------L DISPRAAGLV GRDGPYDKQP FMVAFFKASE ENSBTAP00000025614/1-496 ---------- ---------L SISPGAAGLV GRDGPYDKQP FMVAFFKASE 401 450 bmy_00857T0/1-356 VRVRSARSAA GRRRQQGRSR SAPAQDVSRA SSASDYNSSE LKTACRKHEL ENSP00000283147/1-513 VHVRTTRSAS SRRRQQSRNR STQSQDVARV SSASDYNSSE LKTACRKHEL BACU005133/1-287 ---------- -----QGRSR SAPAQDVSRA SRVSDYNSSE LKTACRKHEL ENSTTRP00000015103/1-304 VHVRSTRSAA GRRRQQSRNR SAPAQDVSRA SSASDYNSSE LKTACRKHEL ENSBTAP00000025614/1-496 VHVRSARSAP GRRRQQARNR STPAQDVSRA SSASDYNSSE LKTACRKHEL 451 500 bmy_00857T0/1-356 YVSFQDLGWQ -------GYA ANYCDGECSF PLNAHMNATN HAIVQTLVHL ENSP00000283147/1-513 YVSFQDLGWQ DWIIAPKGYA ANYCDGECSF PLNAHMNATN HAIVQTLVHL BACU005133/1-287 YVSFQDLGWQ DWIIAPKGYA ANCCDGECSF PLNAHMNATN HAIVQTLVHL ENSTTRP00000015103/1-304 YVSFQDLGWQ DWIIAPKGYA ANYCDGECSF PLNAHMNATN HAIVQTLVHL ENSBTAP00000025614/1-496 YVSFQDLGWQ DWIIAPKGYA ANYCDGECSF PLNAHMNATN HAIVQTLVHL 501 550 bmy_00857T0/1-356 MNPEYVPKPC CAPTKLNAIS VLYFDDNSNV ILKKYRNMVV RACGCH ENSP00000283147/1-513 MNPEYVPKPC CAPTKLNAIS VLYFDDNSNV ILKKYRNMVV RACGCH BACU005133/1-287 MNPEYVPKPC CAPTKLNAIS VLCFDDNSNV ILKKYRNMVV RACGCH ENSTTRP00000015103/1-304 MNPEYVPKPC CAPTKLNAIS VLYFDDNSNV ILKKYRNMVV RACGCH ENSBTAP00000025614/1-496 MNPEYVPKPC CAPTKLNAIS VLYFDDNSNV ILKKYRNMVV RACGCH