KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:26:49 2014 Check: 00 .. Name: ENSTTRP00000010264/1-441 Len: 512 Check: 4309 Weight: 1.00 Name: ENSP00000364260/1-441 Len: 512 Check: 7891 Weight: 1.00 Name: ENSBTAP00000025618/1-436 Len: 512 Check: 931 Weight: 1.00 Name: bmy_01804T0/1-406 Len: 512 Check: 7636 Weight: 1.00 Name: BACU017564/1-430 Len: 512 Check: 3 Weight: 1.00 // 1 50 ENSTTRP00000010264/1-441 ---------- ---------- ---------- ---------- ---------- ENSP00000364260/1-441 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025618/1-436 ---------- ---------- ---------- ---------- ---------- bmy_01804T0/1-406 AGNCKGSARY SRHTFRSATR DPGPNRHLAA ASGAARSAPH FSRTAQAPCM BACU017564/1-430 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000010264/1-441 ---------- ---------M RDLEEPGPRP TATSCGCVKP ALETGNLLTE ENSP00000364260/1-441 ---------- ---------M RGLEESGPRP TATPCGCVKP ALETGNLLTE ENSBTAP00000025618/1-436 ---------- ---------M RDLKESRPCA TATRCGCVKP ALETGNLLTE bmy_01804T0/1-406 ETGSGRLERV GWAPVRPLAM RDLEEPGPRP TATSCGCMKP ALETGNLLTE BACU017564/1-430 ---------- ---------M RDLEEPGPRP TATSCGCMKP ALETGNLLTE 101 150 ENSTTRP00000010264/1-441 PIGYLESCFS AKNGTPRQPS ICSHSRACLR IRKSIFNNPE HSLMGLEQFS ENSP00000364260/1-441 PVGYLESCFS AKNGTPRQPS ICSYSRACLR IRKRIFNNPE HSLMGLEQFS ENSBTAP00000025618/1-436 PIGYLESCFS AKNGTPRQPS ICSHSRACLR IRKSIFNNPE HSLMGLEQFS bmy_01804T0/1-406 PIGYLESCFS AKNGTPRQPS ICSRSRACLR IRKSIFNNPE HSLMGLEQFS BACU017564/1-430 PIGYLESCFS AKNGTPRQPS ICSHSRACLR IRKSIFNNPE HSLMGLEQFS 151 200 ENSTTRP00000010264/1-441 HVWILFVFHK NGHLSCKAKV QPPRLNGVKT GVFSTRSPHR PNAIGLTLAK ENSP00000364260/1-441 HVWILFVFHK NGHLSCKAKV QPPRLNGAKT GVFSTRSPHR PNAIGLTLAK ENSBTAP00000025618/1-436 HVWILFVFHK NGHLSYKAKV QPPRLNGAKT GIFSTRSPHR PNAIGLTLAK bmy_01804T0/1-406 HVWILFVFHK NGHLSCKAKV QPPRLNGMKT GVFSTRSPHR PNAIGLTLAK BACU017564/1-430 HVWILFVFHK NGHLSCKAKV QPPRLNGMKT GVFSTRSPHR PNAIGLTLAK 201 250 ENSTTRP00000010264/1-441 LEKVEGGAIY LSGIDMIHGT PVLDIKPYIA DYDSPQNLIE PLGDVNXXXX ENSP00000364260/1-441 LEKVEGGAIY LSGIDMIHGT PVLDIKPYIA EYDSPQNVME PLADFNLQNN ENSBTAP00000025618/1-436 LERVEGGAVY LSGIDMIHGT PVLDIKPYIA DYDSPQTLIE SSGDFTLRNN bmy_01804T0/1-406 LEKVEG---- ---------- ---------- ---------- ---------- BACU017564/1-430 LEKVEGGAIY LSGIDMIHGT PVLDIKPYIA DYDSPQNLIE PLGDFNLQNN 251 300 ENSTTRP00000010264/1-441 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000364260/1-441 QHTPNTVSQS DSKTDSCDQR QLSGCDEPQP HHSTKRKPKC PEDRTSEENY ENSBTAP00000025618/1-436 QHKPKTVSQS EGKTDSCDWQ QLSEYKESQP CRCTTEKPKC PEDRTSGENI bmy_01804T0/1-406 ---------- ---------- ----YEEPQL YSCTKEKPKC PEDRTSGENN BACU017564/1-430 QCKPKTVSQC DGKTDSCDQQ QLSGYEEPRL YSGTKEKPKC PEDRTSGENN 301 350 ENSTTRP00000010264/1-441 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000364260/1-441 LTHSDTARIQ QAFPMHREIA VDFGLESRRD QSSSVAEEQI GPYCPEKSFS ENSBTAP00000025618/1-436 AGSDDAANTQ QSSPEPRERA AELGEES--- -SPRVAQEQS GPRIQEKSPS bmy_01804T0/1-406 AKHDNSAKIQ QSSPEPRERA ADLGEESESG PSPRVAEEQS GPCCLEKSFS BACU017564/1-430 AKHDNSAKIQ QSSPEPRERA ADLGEESESG LSPRVAEEQS GPCCLEKSFS 351 400 ENSTTRP00000010264/1-441 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000364260/1-441 EKGTDKKLER VEGAAVLQGS RAETQPMAPH CPAGRADGAP RSVVPAWVTE ENSBTAP00000025618/1-436 EEQEDSRLKR GEEAVAPEGH DPEMSPKA-- -PSRVAGAAH CSVVPAWVRD bmy_01804T0/1-406 EEQADSRLRR GEAAVVPQGH STEVPPKALP CPSRAAGAAH RSAVPAWVRE BACU017564/1-430 EEQADSRLRR GEAAVVPQGH STEVPPEALP CPSRAAGAAH RSAVPAWVRE 401 450 ENSTTRP00000010264/1-441 XXXXXXXXXX XXXXXXXXXX XXXXX--IGQ ASFNYFQSAE EARCAIEAVL ENSP00000364260/1-441 APVATLEVRF TPHAEMDLGQ LSSQD--VGQ ASFKYFQSAE EAKRAIEAVL ENSBTAP00000025618/1-436 APVATLEVRF TPHAEMDLEH LSSGEPGVGQ ASFKYFQSAE EARHAIEAVL bmy_01804T0/1-406 APVATLGVRF TPHAEMDLEH LSSGEP---- ---------- ---------- BACU017564/1-430 APVATLGVRF TPHAEMDLEH LSSGEPGIGQ ASFKYFQSAE EARCAIEAVL 451 500 ENSTTRP00000010264/1-441 SADPRSVYRR KLCQDRLFYF TVDTAHVTCW FGDGFAEVLR IKPASEPVQM ENSP00000364260/1-441 SADPRSVYRR KLCQDRLFYF TVDIAHVTCW FGDGFAEVLR IKPASEPVHM ENSBTAP00000025618/1-436 SADPRSVYRR KLCQDRLFYF TVDTAHVTCW FGDGFAEVLR IKPASEPVQM bmy_01804T0/1-406 -ADPRSVYRR KVCQDRLFYF TVDIAHVTCW FGDGFAEVLR IKPASDLFR- BACU017564/1-430 SADPRSVYRR KVCQDRLFYF TVDIAHVTCW FGDGFAEVLR IKPASDLFR- 501 550 ENSTTRP00000010264/1-441 GDPAEPLVPL GS ENSP00000364260/1-441 TGPVGSLVSL GS ENSBTAP00000025618/1-436 SKPAESPVSL GS bmy_01804T0/1-406 ---------- -- BACU017564/1-430 ---------- --