KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:26:50 2014 Check: 00 .. Name: ENSP00000304290/1-501 Len: 532 Check: 6571 Weight: 1.00 Name: ENSBTAP00000025624/1-505 Len: 532 Check: 2883 Weight: 1.00 Name: bmy_01745T0/1-506 Len: 532 Check: 6524 Weight: 1.00 Name: BACU001235/1-530 Len: 532 Check: 6071 Weight: 1.00 // 1 50 ENSP00000304290/1-501 MTPGA--LLM LLGALGAPLA ---------- --------PG VRGSEAEGRL ENSBTAP00000025624/1-505 MTPGAL-LLL LLGVLGAHLA ---------- --------PG ARGSEAEGRL bmy_01745T0/1-506 MTPGALLLLL LLGALGAPFA ---------- --------PG ARGSEAEGRL BACU001235/1-530 MTPGA--LLL LLGALGAPFA PGPEVVARNQ GFTQFSPPPG ARGSEAEGRL 51 100 ENSP00000304290/1-501 REKLFSGYDS SVRPAREVGD RVRVSVGLIL AQLISLNEKD EEMSTKVYLD ENSBTAP00000025624/1-505 REKLFSGYDS TVRPAREVGD RVWVSIGLTL AQLISLNEKD EEMSTKVYLD bmy_01745T0/1-506 REKLFSGYDS SVRPAREVGD RVAVSVGLSL AQLISLNEKD EEMSTKVYLD BACU001235/1-530 REKLFSGYDS SVRPAREVGD RVGVSVGLSL AQLISLNEKD EEMSTKVYLD 101 150 ENSP00000304290/1-501 LEWTDYRLSW DPAEHDGIDS LRITAESVWL PDVVLLNNND GNFDVALDIS ENSBTAP00000025624/1-505 LEWTDYRLSW DPEEHEGIDS LRISAESVWL PDVVLLNNND GNFDVALDIN bmy_01745T0/1-506 LEWTDYRLSW DPEEHEGIDS LRITAESVWL PDVVLLNNND GNFDVALDIN BACU001235/1-530 LEWTDYRLSW DPEEHEGIDS LRITAESVWL PDVVLLNNND GNFDVALDIN 151 200 ENSP00000304290/1-501 VVVSSDGSVR WQPPGIYRSS CSIQVTYFPF DWQNCTMVFS SYSYDSSEVS ENSBTAP00000025624/1-505 VVVSSDGSMR WQPPGIYRSS CSIQVTYFPF DWQNCTMVFS SYSYDSSEVS bmy_01745T0/1-506 VVVSSDGSVR WQPPGVYRSS CSIQVTYFPF DWQNCTMVFS SYSYDSSEVS BACU001235/1-530 VVVSSDGSVR WQPPGIYRSS CSIQVTYFPF DWQNCTMVFS SYSYDSSEVS 201 250 ENSP00000304290/1-501 LQTGLGPDGQ GHQEIHIHEG TFIENGQWEI IHKPSRLIQP PGDPRGGREG ENSBTAP00000025624/1-505 LQTGLSPEGQ ERQEVYIHEG TFIENGQWEI IHKPSRLIQP SVDPRGGGEG bmy_01745T0/1-506 LQTGLGPDGQ ERQEVHIHEG TFIENGQWEI IHKPSRLIQP PVDPRGGGER BACU001235/1-530 LQTGLGPDGQ ERQEVHIHEG TFIENGQWEI IHKPSRLIQP PVDPRGEGER 251 300 ENSP00000304290/1-501 QRQEVIFYLI IRRKPLFYLV NVIAPCILIT LLAIFVFYLP PDAGEKMGLS ENSBTAP00000025624/1-505 RREEVTFYLI IRRKPLFYLV NVIAPCILIT LLAIFVFYLP PDAGEKMGLS bmy_01745T0/1-506 RREEVTFYLI IRRKPLFYLV NVIAPCILIT LLAIFVFYLP PDAGEKMGLS BACU001235/1-530 RREEVTFYLI IRRKPLFYLV NVIAPCILIT LLAIFVFYLP PDAGEKMGLS 301 350 ENSP00000304290/1-501 IFALLTLTVF LLLLADKVPE TSLSVPIIIK YLMFTMVLVT FSVILSVVVL ENSBTAP00000025624/1-505 IFALLTLTVF LLLLADKVPE TSLSVPIIIK YLMFTMVLVT FSVILSVVVL bmy_01745T0/1-506 IFALLTLTVF LLLLADKVPE TSLSVPIIIK YLMFTMVLVT FSVILSVVVL BACU001235/1-530 IFALLTLTVF LLLLADKVPE TSLSVPIIIK YLMFTMVLVT FSVILSVVVL 351 400 ENSP00000304290/1-501 NLHHRSPHTH QMPLWVRQIF IHKLPLYLRL KRPKPERDLM PEPPHCSS-- ENSBTAP00000025624/1-505 NLHHRSPHTH QMPLWVRQIF IHKLPLYLGL KRPKPERDQM QEPPSIAPRD bmy_01745T0/1-506 NLHHRSPYTH QMPLWVRQIF IHKLPLYLGL KRPKPERDQI PELPPIPLRD BACU001235/1-530 HLHHRSPYTH QMPLWVRQIF IHKLPLYLGL KRPKNERDQI PEPPPMPLRD 401 450 ENSP00000304290/1-501 -PGSGWGRGT DEYFIRKPPS DFLFPKPNR- -------FQP ELSAPDLRRF ENSBTAP00000025624/1-505 SPGSGWGRGT DEYFIRKPPN DFLFPKPNR- -------FQP ELSAPDLRRF bmy_01745T0/1-506 SPGSGWGRGT DEYFIRKPPN DFLFPKPNR- -------FQP ELSAPDLRRF BACU001235/1-530 SPGSGWGRGT DEYFIRKPPN DFSSPSPTGS IYSPSPTFQP ELSAPELRRF 451 500 ENSP00000304290/1-501 IDGPNRAVAL LPELREVVSS ISYIARQLQE QEDHDALKED WQFVAMVVDR ENSBTAP00000025624/1-505 IDGPNRAVGL PPELREVVSS ISYIARQLQE QEDHDVLKED WQFVAMVVDR bmy_01745T0/1-506 IDGPNRAVGL PPELREVVSS ISYIAQQLQE QEDHDALKED WQFVAMVVDR BACU001235/1-530 IDGPNRAVGL PPELREVVSS ISYIAQQLQE QEDHDALKED WQFVAMVVDR 501 550 ENSP00000304290/1-501 LFLWTFIIFT SVGTLVIFLD ATYHLPPPDP FP ENSBTAP00000025624/1-505 LFLWTFIIFT SVGTLVIFLD ATYHLPPADP FP bmy_01745T0/1-506 LFLWTFIIFT SVGTLVIFLD ATYHLPPPDP FP BACU001235/1-530 LFLWTFIIFT SVGTLVIFLD ATYHLPPPDP FP