KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:26:50 2014 Check: 00 .. Name: ENSP00000416193/1-441 Len: 465 Check: 5965 Weight: 1.00 Name: ENSBTAP00000025626/1-398 Len: 465 Check: 4604 Weight: 1.00 Name: BACU019548/1-399 Len: 465 Check: 350 Weight: 1.00 Name: bmy_14705T0/1-327 Len: 465 Check: 3193 Weight: 1.00 Name: ENSTTRP00000008714/1-435 Len: 465 Check: 7656 Weight: 1.00 // 1 50 ENSP00000416193/1-441 MCPQLAGAGS MGSPGATTGW GLLDYKTEKY VMTRNWRVGA LQRLLQFGIV ENSBTAP00000025626/1-398 -----AGAGN MGSPGTGVGW GLLDYKTEKY VMTRNWRVGA LQRLLQLGVV BACU019548/1-399 ---PPTGSGS MGSPGAVVGW GLLDYKTEKY VKTRNWRVGA LQRLLQLGVM bmy_14705T0/1-327 ---------- MGSPGAMVGW GLLDYKTEKY VKTRNWRVGA LQRLLQLGVM ENSTTRP00000008714/1-435 TRPPPAGSGS MVSPGAMVGW GLLDYKTEKY VRTRNWRVGA LQRLLQLGVM 51 100 ENSP00000416193/1-441 VYVVG----- ---------- ---------W ALLAKKGYQE RDLEPQFSII ENSBTAP00000025626/1-398 VYVVG----- ---------- ---------W ALLTKKGYQE QDLDPQVSVI BACU019548/1-399 VYVVG----- ---------- ---------W ALLAKKGYQE QDLDPQISVI bmy_14705T0/1-327 VYVVGPMLGL GTEQDGPPSL HRRPPAGRRW ALLAKKGYQE QDLDPQISVI ENSTTRP00000008714/1-435 VYVVG----- ---------- ---------W ALLAKKGYQE QDLDPQISVI 101 150 ENSP00000416193/1-441 TKLKGVSVTQ IKELGNRLWD VADFVKPPQG ENVFFLVTNF LVTPAQVQGR ENSBTAP00000025626/1-398 TKLKGVSVTR IEELGNRLWD VADFVKPPQG ENVFFLVTNF LATPGQVQGR BACU019548/1-399 TKLKGVSVTQ IKELGNRLWD VADFVKPPQG ENVFFLVTNF LVTSEQVQGR bmy_14705T0/1-327 TKLKGVSVTQ IKELGNRLWD VADFVKPPQ- ------VGDL VLLP------ ENSTTRP00000008714/1-435 TKLKGVSVTQ IKELGNRLWD VADFVKPPQG ENVFFLVTNF LVTPEQVQGR 151 200 ENSP00000416193/1-441 CPEHPSVPLA NCWVDEDCPE GEGGTHSHGV KTGQCVVFNG THRTCEIWSW ENSBTAP00000025626/1-398 CPEHPSIPLA NCWADQDCPE GETGTHSHGI KTGQCVVFNG THRTCEIRGW BACU019548/1-399 CPEHPSIPLA SCWADQDCPE GETGTHSHGI KTGQCVVFNG THRTCEIRGW bmy_14705T0/1-327 ---------- ---------- --------GI KTGQCVVFNG THRTCEIRGW ENSTTRP00000008714/1-435 CPEHPSIPLA SCWADQDCPE GETGTHSHGI KTGQCVVFNG THRTCEIRGW 201 250 ENSP00000416193/1-441 CPVESGVVPS RPLLAQAQNF TLFIKNTVTF SKFNFSKSNA LETWDPTYFK ENSBTAP00000025626/1-398 CPVESGAVPV KPLLLQAENF TLFIKNTVTF SKFNFSRSNA LDTQDPTYFK BACU019548/1-399 CPVESGAVPV --------NF TLFIKNTVTF SKFNFSRSNA LDTQDPTYFK bmy_14705T0/1-327 CPVESGAVPV ---------- ---------- -------SNA LDTQDPTYFK ENSTTRP00000008714/1-435 CPVESGAVPV KPLLVQAENF TLFIKNTVTF SKFNFSKSNA LDTQDPTYFK 251 300 ENSP00000416193/1-441 HCRYEPQFSP YCPVFRIGDL VAKAGGTFED LALLGGSVGI RVHWDCDLDT ENSBTAP00000025626/1-398 LCHYDPHSSP ACPVFRIGDL VAAAGGVFED LALLGGAVGV HVRWDCDLDS BACU019548/1-399 RCRYDPRFSP SCPVFRIGDL VAAAGGVFED LALLGGAMGV HVHWNCDLDS bmy_14705T0/1-327 RCRYDPRSSP SCPVFRIGDL VAAAGGVFED LALLGGAMGV HVHWNCDLDS ENSTTRP00000008714/1-435 RCHYDPRSSP SCPVFRIRDL MAAAGGVFED LALLGGAMGI HVHWNCDLDT 301 350 ENSP00000416193/1-441 GDSGCWPHYS FQLQEKSYNF RTATHWWEQP GVEARTLLKL YGIRFDILVT ENSBTAP00000025626/1-398 RGADCRPQYS FQLQERSYNF RTATHWWESS GVEARSLLKL YGIRFDILVT BACU019548/1-399 RGSDCWPHYS FQLQERTYNF RCGPH---CP PAPSQVLVCL SSWKF----- bmy_14705T0/1-327 RGSDCRPHYS FQLQERTYNF RTATHWWEAS GVEARSLLKL YGIRFDILVT ENSTTRP00000008714/1-435 RASDCWPHYS FQLQERSYNF RTATHWWEAS GVEVRSLLKL YGIRFDILVT 351 400 ENSP00000416193/1-441 GQAGKFGLIP TAVTLGTGAA WLGVVTFFCD LLLLYVDREA HFYWRTKYEE ENSBTAP00000025626/1-398 GRAGKFGLIP TLISLGTGAA WLGVITFLCD LLLLYVDGEA HFYWRTKYEE BACU019548/1-399 ------GLIP TFITLGTGAA WLGVITFLCD LLLLYVDGEA HFYWRTKYEE bmy_14705T0/1-327 GR-------- ---------- ----ITFLCD LLLLYVDGEA HFYWRTKYEE ENSTTRP00000008714/1-435 GRAGKFGLIP TLITLGTGAA WLGVITFLCD LLLLYVDGEA HFYWRTKYEE 401 450 ENSP00000416193/1-441 AKAPKATANS VWRELALASQ ARLAECLRRS SAPAPTATAA GSQTQTPGWP ENSBTAP00000025626/1-398 VKAPKRTARP EQTELAPAP- ---PRPAVQG P--------- ---------- BACU019548/1-399 AKAPKVTASP EQTKPASAP- TWLPRLLRGG PAPVPTARAA TRSWTPKPW- bmy_14705T0/1-327 AKAPKVTASP EQTKPASAP- ---LHLAAQA P--------- ---------- ENSTTRP00000008714/1-435 AKAPKVTASP EQTKPASAPR IWLPRLLRGA PAPVPTARAA TRSWTPKPWG 451 500 ENSP00000416193/1-441 CPSSDTHLPT HSGSL ENSBTAP00000025626/1-398 ---------- ----- BACU019548/1-399 ---------- ----- bmy_14705T0/1-327 ---------- ----- ENSTTRP00000008714/1-435 ACLLAHSGL- -----