KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:26:51 2014 Check: 00 .. Name: ENSP00000319179/1-398 Len: 398 Check: 9932 Weight: 1.00 Name: ENSBTAP00000025631/1-398 Len: 398 Check: 5610 Weight: 1.00 Name: ENSTTRP00000015817/1-398 Len: 398 Check: 9445 Weight: 1.00 Name: bmy_02004T0/1-398 Len: 398 Check: 9618 Weight: 1.00 Name: BACU003237/1-374 Len: 398 Check: 4157 Weight: 1.00 // 1 50 ENSP00000319179/1-398 MPRPGHPRPA SGPPRLGPWE RPTELCLETY DKPPQPPPSR RTRRPDPKDP ENSBTAP00000025631/1-398 MPRPGHPRPS SGPPRLGPWE RPAELCLETY DEQARAPPSR RTRRPDPKDP ENSTTRP00000015817/1-398 MPRPGHPRPS SGPPRLGPWE RPTELCLETY DEPSWAPPSR RTRRPDPKDP bmy_02004T0/1-398 MPRPGHPRPS SGPPRLGPWE RPTELCLETY DEPSWAPPSR RTRRPDPKDP BACU003237/1-374 MPRPGHPRPS SGPPRLGPWE RPTELCLETY DEPSRAPPSR RTRRPDPKDP 51 100 ENSP00000319179/1-398 GHHGPESITF ISGSAEPALE SPTCCLLWRP WVWEWCRAAF CFRRCRDCLQ ENSBTAP00000025631/1-398 GHHGPESLTF ISGSAEQTPE PPACCLLWRP WVWDWCRAAF CFRRCWDCLQ ENSTTRP00000015817/1-398 GHHGPESLTF ISGSAEQAAE PPACCLLWRP WVWDWCRAAF CFRRCRDCLQ bmy_02004T0/1-398 GHHGPESLTF ISGSAEQAAE PPACCLLWRP WVWDWCRAAF CFRRCRDCLQ BACU003237/1-374 GHHGPESLTF ISGSAEQAAE PPACCLLWRP WVWDWCRAAF CFRRCRDCLQ 101 150 ENSP00000319179/1-398 RCGACVRGCS PCLSTEDSTE GTAEANWAKE HNGVPPSPDR APPSRRDGQR ENSBTAP00000025631/1-398 RCGACARGCS PCLSSGDSPE GAAEANWVKE HNGVPPSPDH APPSRRDGQR ENSTTRP00000015817/1-398 RCGACVRGCS PCLPAGDSPE GAAEASWVKE HNGVPPSPDR APPSRRDGHR bmy_02004T0/1-398 RCGACVRGCS PCLSAGDSPE GAAEANWVKE HNGVPPSPDR APPSRRDGQR BACU003237/1-374 RCGACVRGCS PCLSAGDSPE GAAEANWVKE HNGVPPSPDR APPSRRDGQR 151 200 ENSP00000319179/1-398 LKSTMGSSFS YPDVKLKGIP VYPYPRATSP APDADSCCKE PLADPPPMRH ENSBTAP00000025631/1-398 LKSAMGSSFS YPDVKLKGIP VYPYRSTTSP APDADSCCKE PLADPPPMRH ENSTTRP00000015817/1-398 LKSAMGSSFS YPDVKLKGIP VYPYRSTTSP ALDADSCCKE PLADPPPTRH bmy_02004T0/1-398 LKSAMGSSFS YPDVKLKGIP VYPYRSTTSP APDADSCCKE PLADPPPIRH BACU003237/1-374 L--------- ---------- -----NTTSP APDADSCCKE PLADPPPMRH 201 250 ENSP00000319179/1-398 SLPSTFASSP RGSEEYYSFH ESDLDLPEMG SGSMSSREID VLIFKKLTEL ENSBTAP00000025631/1-398 SLPSTLASSP RGSEEYYSFH ESDLDLPEIG SGSMSSREID VLIFKKLTEL ENSTTRP00000015817/1-398 SLPSTLASSP RGSEEYYSFH ESDLDLPEIG SGSMSSREID VLIFKKLTEL bmy_02004T0/1-398 SLPSTLASSP RGSEEYYSFH ESDLDLPEIG SGSMSSREID VLIFKKLTEL BACU003237/1-374 SLPSTLASSP RGSEEYYSFH ESDLDLPEIG SGSMSSREID VLIFKKLTEL 251 300 ENSP00000319179/1-398 FSVHQIDELA KCTSDTVFLE KTSKISDLIS SITQDYHLDE QDAEGRLVRG ENSBTAP00000025631/1-398 FSVHQIDELA KCTSDTVFLE KTSKISDLIS SITQDYHLDE QDAEGRLVRG ENSTTRP00000015817/1-398 FSVHQIDELA KCTSDTVFLE KTSKISDLIS SITQDYHLDE QDAEGRLVRG bmy_02004T0/1-398 FSVHQIDELA KCTSDTVFLE KTSKISDLIS SITQDYHLDE QDAEGRLVRG BACU003237/1-374 FSVHQIDELA KCTSDTVFLE KTSKISDLIS SITQDYHLDE QDAEGRLVRG 301 350 ENSP00000319179/1-398 IIRISTRKSR ARPQTSEGRS TRAAAPTAAA PDSGHETMVG SGLSQDELTV ENSBTAP00000025631/1-398 IIRISTRKSR ARPQTAEGRS SRAAAPAAAA PDSGHETMVG SGLSQDELTV ENSTTRP00000015817/1-398 IIRISTRKSR ARPQTTEGRS TRVAASAAPA PDSGHETMVG SGLSQDELTV bmy_02004T0/1-398 IIRISTRKSR ARPQTTEGRS TRVAASAAPA PDSGHETMVG SGLSQDELTV BACU003237/1-374 IIRISTRKSR ARPQTTEGRS TRVAASAAPA PDSGHETMVG SGLSQDELTV 351 400 ENSP00000319179/1-398 QISQETTADA IARKLRPYGA PGYPASHDSS FQGTDTDSSG APLLQVYC ENSBTAP00000025631/1-398 QISQETTADA IARKLRPYGA PGYPASHDSS FQGTDTDSSG APLLQVYC ENSTTRP00000015817/1-398 QISQETTADA IARKLRPYGA PGYQASHDSS FQGTDTDSSG APLLQVYC bmy_02004T0/1-398 QISQETTADA IARKLRPYGA PGYQASHDSS FQGTDTDSSG APLLQVYC BACU003237/1-374 QISQETTADA IARKLRPYGA PGYQASHDSS FQGTDTDSSG APLLQVYC