KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:26:51 2014 Check: 00 .. Name: ENSP00000218516/1-429 Len: 439 Check: 8805 Weight: 1.00 Name: ENSBTAP00000025636/1-439 Len: 439 Check: 4471 Weight: 1.00 Name: ENSTTRP00000012127/1-427 Len: 439 Check: 2437 Weight: 1.00 Name: bmy_10085T0/1-394 Len: 439 Check: 4832 Weight: 1.00 Name: BACU009094/1-421 Len: 439 Check: 1324 Weight: 1.00 // 1 50 ENSP00000218516/1-429 -----MQLRN PELHLGCALA LRFLALVSWD IPGARALDNG LARTPTMGWL ENSBTAP00000025636/1-439 MMTATMKPVS RVLRLGCVLA FCFQVLVPYG LPRAWGLDNG LAMTPTMGWL ENSTTRP00000012127/1-427 -----VKLVS RVRRLGCVLA FCFLALFLWG LPGARALDNG LAMTPTMGWL bmy_10085T0/1-394 -MTATMKLVS GVRRLGCVLA FCFLALFLWG LPVARALDNG LAMTPTMGWL BACU009094/1-421 -----MKLVS RVRRLGCVLA FCFLALFLWG LPVAWALDNG LAMTPTMGWL 51 100 ENSP00000218516/1-429 HWERFMCNLD CQEEPDSCIS EKLFMEMAEL MVSEGWKDAG YEYLCIDDCW ENSBTAP00000025636/1-439 HWERFMCNVN CQEEPDSCIS EKLFLQIAEI MASDGWKDVG YEYICIDDCW ENSTTRP00000012127/1-427 HWERFMCNVN CQEEPDSCVS EKLFLQIAEI MASDGWKDVG YEYLCIDDCW bmy_10085T0/1-394 HWERFMCNVN CQEEPDSCVS EKLFLQIAEI MASDGWKDVG YEYLCIDDCW BACU009094/1-421 HWERFMCNVN CQEEPDSCVS EKLFLQIAEI MASDGWKDVG YEYLCIDDCW 101 150 ENSP00000218516/1-429 MAPQRDSEGR LQADPQRFPH GIRQLANYVH SKGLKLGIYA DVGNKTCAGF ENSBTAP00000025636/1-439 MAPERDSKGR LQADPKRFPG GIHRLADYVH SKGLKLGIYA DVGNKTCAGF ENSTTRP00000012127/1-427 MAPERDSEGR LQADPKRFPG GIRRLANYVH SKGLKLGIYA DVGNKTCAGF bmy_10085T0/1-394 MAPERDSEGR LQADPKRFPG GIRRLANYVH SKGLKLGIYA DVGNKTCAGF BACU009094/1-421 MAPERDSEGR LQADSKRFPG GIRRLANYVH SKGLKLGIYA DVGNKTCAGF 151 200 ENSP00000218516/1-429 PGSFGYYDID AQTFADWGVD LLKFDGCYCD SLENLADGYK HMSLALNRTG ENSBTAP00000025636/1-439 PGSFGYYDID AQTFADWGVD LLKFDGCYCD SIQHLAEGYK QMSLALNRTG ENSTTRP00000012127/1-427 PGSFGYYDID AKTFADWGVD LLKFDGCYCD SIKHLADGYK HMSLALNRTG bmy_10085T0/1-394 PGSFGYYDID AETFADWGVD LLKFDGCYCD SIKHLANGYK HMSLALNRTG BACU009094/1-421 PGSFGYYDID AETFADWGVD LLKFDGCYCD SIKHLADGYK HMSLALNRTG 201 250 ENSP00000218516/1-429 RSIVYSCEWP LYMWPFQKPN YTEIRQYCNH WRNFADIDDS WKSIKSILDW ENSBTAP00000025636/1-439 RSIVYSCEWP LYVWPIFKPN YTEIREYCNH WRNFADIYDS WESIRKTLDW ENSTTRP00000012127/1-427 RSIVYSCEWP LYMWPIFKPN YTEIREYCNH WRNFADVYDS WQSIRSILDW bmy_10085T0/1-394 RSIVYSCEWP LYMWPIFKPN YTEIREYCNH WRNFADVYDS WQSIRSILDW BACU009094/1-421 RSIVYSCEWP LYMWPIFKPN YTEIREYCNH WRNFADVYDS WQSIRSILDW 251 300 ENSP00000218516/1-429 TSFNQERIVD VAGPGGWNDP DMLVIGNFGL SWNQQVTQMA LWAIMAAPLF ENSBTAP00000025636/1-439 TSSNQKIIVP VAGPGGWNDP DMLVIGNFGL SRDQQITQMA LWAIMAAPLL ENSTTRP00000012127/1-427 TTSNQESIVP VAGPGGWNDP DMLVIGNFGL SRDQQITQMA LWAIMAAPLL bmy_10085T0/1-394 TTSNQERIVP VAGPGA---- ---------- ---------- -------PLL BACU009094/1-421 TTSNQERIVP VAGPGGWNDP DMLVIGNFGL SRDQQITQMA LWAIMAAPLL 301 350 ENSP00000218516/1-429 MSNDLRHISP QAKALLQDKD VIAINQDPLG KQGYQLRQGD NFEVWERPLS ENSBTAP00000025636/1-439 MSNDLRHISP EAKALLQDKD VIAINQDRLG KQGYWLRKED NFEMWERPLL ENSTTRP00000012127/1-427 MSNDLRHICL EAKALLQDKD VIAINQDPLG KQGYRLRKED NFEVWERPLS bmy_10085T0/1-394 MSNDLRHISL EAKALLQDKD VIAINQDPLG KQGYRLRKED NFEVWERPLS BACU009094/1-421 MSNDLRHISL EAKALLQDKD VIAINQDPLG KQGYRLRKED NFEVWERPLS 351 400 ENSP00000218516/1-429 GLAWAVAMIN RQEIGGPRSY TIAVASLGKG VACNPACFIT QLLPVKRKLG ENSBTAP00000025636/1-439 NLAWAVAIVN LQEIGGPRSY TISVTSLGRG LACNPNCLIT ELLPEKRKLG ENSTTRP00000012127/1-427 NLAWAVAMVN LQEIGGPRSY TISVTSLGQG LACNPDCLIT QLLPVKRKLG bmy_10085T0/1-394 NLAWAVAMVN LQEIGGPRSY TISLTSLGQG LACNPDCLIT QLLPVKRKLG BACU009094/1-421 NLAWAVAMVN LQEIGGPRSY TISLTSLGQG LACNPDCLIT QLLPVKRKLG 401 450 ENSP00000218516/1-429 FYEWTSRLRS HINPTGTVLL QLENTMQMSL -----KDLL ENSBTAP00000025636/1-439 IYEWTSTLKT QINPTGTVLL RLETTSSAQF SHSVVSDFL ENSTTRP00000012127/1-427 FYEWTSSLKT QVNPTGTVLL TLEASTAL-- -----KCFL bmy_10085T0/1-394 FYEWTSSLKT QINPTGTVLL RLERAS---- --------- BACU009094/1-421 FYEWTSSLKT QINPTGTVLL RLERAS---- ---------