KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:26:52 2014 Check: 00 .. Name: ENSP00000448248/1-344 Len: 346 Check: 9480 Weight: 1.00 Name: ENSBTAP00000025642/1-345 Len: 346 Check: 7011 Weight: 1.00 Name: ENSTTRP00000012557/1-345 Len: 346 Check: 2842 Weight: 1.00 Name: bmy_20669T0/1-195 Len: 346 Check: 1342 Weight: 1.00 Name: BACU016410/1-313 Len: 346 Check: 106 Weight: 1.00 // 1 50 ENSP00000448248/1-344 MEAARPFARE WRAQSLPLAV GGVLKLRLCE LWLLLLGSSL NARFLPDEED ENSBTAP00000025642/1-345 MEAL-PFSVE WYARWFPLTQ TGIWKMCLCE FWLLLLGSGL KGHLLPDEED ENSTTRP00000012557/1-345 METPRRFARE WCAQRLRLAQ TVVWEVWLCE FWLLLLGSGL NAHSLPHEED bmy_20669T0/1-195 METPRLFARE WCARRLPRAQ TVVWKVWLCE FWLLLLRSGL NAHFLPHEED BACU016410/1-313 METPRRLARE LCAQRLPRAQ TVVWKVWLCE FCLLLLGSGL NAHFLPHEED 51 100 ENSP00000448248/1-344 VDFINEYVNL HNELRGDVIP RGSNLRFMTW DVALSRTARA WGKKCLFTHN ENSBTAP00000025642/1-345 VTFINEYVNL HNELRGNVLP RGANLRFMTW DVALSRTARA WGKKCVFERN ENSTTRP00000012557/1-345 VTFINEYVNL HNELRGSVIP RGANLRFMTW DVALSRTARA WGKKCVFERN bmy_20669T0/1-195 VTFINEYVNL HNELRGNVIP RGANLRFMTW DVALSRTARA WGKKCVFERN BACU016410/1-313 VTFINEYVNL HNELRGSVIP RGANLRFMTW DVALSRTARA WGKKCVFERN 101 150 ENSP00000448248/1-344 IYLQDVQMVH PKFYGIGENM WVGPENEFTA SIAIRSWHAE KKMYNFENGS ENSBTAP00000025642/1-345 THLEELYMAH PKFNGIGENI WVGPENEFTA SIAIRSWFEQ RRKYNFEKNS ENSTTRP00000012557/1-345 IHLEKRKMAH PRFNGIGENM WVGPENEFTA SIAIRSWFAQ RKKYNFEKNS bmy_20669T0/1-195 IHLEERKMAH PRFNGIGENM WVGPENEFTA SIAIRSWFAQ RKKYNFEKNS BACU016410/1-313 IHLEELKMAH PRFNGIGENM WVGPENEFTA SIAIRSWFAQ RKNYNFEKNS 151 200 ENSP00000448248/1-344 CSGDCSNYIQ LVWDHSYKVG CAVTPCSKIG HIIHAAIFIC NYAPGGTLTR ENSBTAP00000025642/1-345 CSGNCSNYLQ LVWDRSYKVG CAVTPCSRIG RIKHAALFIC NYAPGRGLSR ENSTTRP00000012557/1-345 CSDNCSNYLQ LVWDQSYKVG CAVTPCSRIG HIKHAALFIC NYAPGGSLSR bmy_20669T0/1-195 CSDNCSNYVQ LVWDKSYKVG CAVTPCSRIG RIKRAALFIC NYAPG----- BACU016410/1-313 CSDNCSNYLQ LVWDKSYKVG CAVTPCSRIG RIKHAALFIC NYAPGGALSR 201 250 ENSP00000448248/1-344 RPYEPGIFCT RCGRRDKCTD FLCSNADRDQ ATYYRFWYPK WEMPRPVVCD ENSBTAP00000025642/1-345 RPYQRGLMCS QCDGYDRCTD FLCSNADRDQ AIYYRYWYPR WEVPRPIVCN ENSTTRP00000012557/1-345 SPYQRGLMCS RCSIYDRCTD FLCSNAGRDQ AIYYRFWYPR WEVPRPIVCD bmy_20669T0/1-195 ---------- ---------- ---------- ---------- ---------- BACU016410/1-313 SPYQRGLMCS RCSSYDRCTD FLCN------ ---YRFWYPR WEVPRPIVCD 251 300 ENSP00000448248/1-344 PLCTFILLLR ILCFILCVIT VLIVQSQFPN ILLEQQMIFT PEESEAGNEE ENSBTAP00000025642/1-345 PLCLLILFLR MMCFSLSATI VLIIQSYFPN ILVEEEMVFT PVETGPAKEK ENSTTRP00000012557/1-345 PLCMLILFLR MLCFSLSAAI VLIIQSYFPN ILLEEEIVFI PEVTGPAKEE bmy_20669T0/1-195 ---------- ---------- ---------- ---------- ---------- BACU016410/1-313 PLCILILFLR MLCFSLSATI VLIVQSHFPN ILLEEEMVFI PEVTGPAKEE 301 350 ENSP00000448248/1-344 EEKEEEKKEK EEMEMEIMEM EEEKEEREEE E--EETQKEK MEEEEK ENSBTAP00000025642/1-345 GKKEKQVEEE EEKEEEEEEE EEEGEEEKEE EGGEEEEEEE VEEEEE ENSTTRP00000012557/1-345 ENIEKEEEEE EEEXXXXXXX XXE-EGKEEG EGEEEEGQEK EEEEEE bmy_20669T0/1-195 ---------- ---------- ---------- ---------- ------ BACU016410/1-313 EEVEKEEEEE EEEEEEEEYM WK-------- ---------- ------