KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:26:53 2014 Check: 00 .. Name: bmy_04395T0/1-656 Len: 936 Check: 2645 Weight: 1.00 Name: ENSP00000318147/1-932 Len: 936 Check: 4142 Weight: 1.00 Name: ENSBTAP00000025655/1-933 Len: 936 Check: 4186 Weight: 1.00 Name: BACU001525/1-773 Len: 936 Check: 4507 Weight: 1.00 Name: ENSTTRP00000007195/1-797 Len: 936 Check: 1232 Weight: 1.00 // 1 50 bmy_04395T0/1-656 ---------- ---------- ---------- ---------- ---------- ENSP00000318147/1-932 MSEAG-GRGC GSPVPQRARW RLVAATAAFC LVSATSVWTA GAEPMSREEK ENSBTAP00000025655/1-933 MSEAGGGRGS GSSVPQRAPW SLVAATAALC LVSATSVWTA GAAPMSREEK BACU001525/1-773 MSEAGGGRGF GSSVPQRAPW SLVAAAAALC LVSATSVWTA GASPMSREEK ENSTTRP00000007195/1-797 MSEAGGGRGF GYSVPQRAPW SLVAATAALC LVSATSVWTA GASPMSREEK 51 100 bmy_04395T0/1-656 ---------- ---------- ---------- ---------- ---------- ENSP00000318147/1-932 QKLGNQVLEM FDHAYGNYME HAYPADELMP LTCRGRVRGQ EPSRGDVDDA ENSBTAP00000025655/1-933 QKLGNQVLEM FDHAYGNYME HAYPADELMP LTCRGRVRGQ EPSRGDVDDA BACU001525/1-773 QKLGNQVLEM FDHAYGNYME HAYPADELMP LTCRGRVRGQ EPSRGDVDDA ENSTTRP00000007195/1-797 QKLGNQVLEM FDHAYGNYME HAYPADELMP LTCRGRVRGQ EPSRGDVDDA 101 150 bmy_04395T0/1-656 ---------- ---------- ---------- ---------- ---------- ENSP00000318147/1-932 LGKFSLTLID SLDTLVVLNK TKEFEDAVRK VLRDVNLDND VVVSVFETNI ENSBTAP00000025655/1-933 LGKFSLTLID SLDTLVVLNK TKEFEDAVRK VLRDVNLDND VVVSVFETNI BACU001525/1-773 LGKFSLTLID SLDTLVVLNK TKEFEDAVRK VLRDVNLDND VVVSVFETNI ENSTTRP00000007195/1-797 LGKFSLTLID SLDTLVVLNK TKEFEDAVRK VLRDVNLDND VVVSVFETNI 151 200 bmy_04395T0/1-656 ---------- ---------- ---MFY---- ----EQTGY- ---------- ENSP00000318147/1-932 RVLGGLLGGH SLAIMLKEKG EYMQWYNDEL LQMAKQLGYK LLPAFNTTSG ENSBTAP00000025655/1-933 RVLGGLLGGH SLAIMLKEKG EYMQWYNDEL LQMAKQLGYK LLPAFNTTSG BACU001525/1-773 RVLGGLLGGH SLAIMLKEKG EYMQWYNDEL LQMAKQLGYK LLPAFNTTSG ENSTTRP00000007195/1-797 RVLGGLLGGH SLAIMLKEKG EYMQWYNDEL LQMAKQLGYK LLPAFNTTSG 201 250 bmy_04395T0/1-656 ---------- ---------- ---------- ---------- ---------- ENSP00000318147/1-932 LPYPRINLKF GIRKPEARTG TETDTCTACA GTLILEFAAL SRFTGATIFE ENSBTAP00000025655/1-933 LPYPRINLKF GIRKPEARTG TETDTCTACA GTLILEFAAL SRFTGATIFE BACU001525/1-773 LPYPRINLKF GIRKPEARTG TETDTCTACA GTLILEFAAL SRFTGATIFE ENSTTRP00000007195/1-797 LPYPRINLKF GIRKPEARTG TETDTCTACA GTLILEFAAL SRFTGATIFE 251 300 bmy_04395T0/1-656 ---------- ---------- ---------- ------SGVG AGIDSYYEYL ENSP00000318147/1-932 EYARKALDFL WEKRQRSSNL VGVTINIHTG DWVRKDSGVG AGIDSYYEYL ENSBTAP00000025655/1-933 EYARKALDFL WEKRQRSSNL VGVTINIHTG DWVRKDSGVG AGIDSYYEYL BACU001525/1-773 EYARKALDFL WEKRQRSSNL VGVTINIHTG DWVRKDSGVG AGIDSYYEYL ENSTTRP00000007195/1-797 EYARKALDFL WEKRQRSSNL VGVTINIHTG DWVRKDSGVG AGIDSYYEYL 301 350 bmy_04395T0/1-656 LKAYVLLGDD SFLERFNTHY DAIMRYISQP PLLLDVHIHK PMLNARTWMD ENSP00000318147/1-932 LKAYVLLGDD SFLERFNTHY DAIMRYISQP PLLLDVHIHK PMLNARTWMD ENSBTAP00000025655/1-933 LKAYVLLGDD SFLERFNTHY DAIMRYISQP PLLLDVHIHK PMLNARTWMD BACU001525/1-773 LKAYVLLGDD SFLERFNT-- ---------- ---------- ---------- ENSTTRP00000007195/1-797 LKAYVLLGDD SFLERFNTHY DAIMRYISQP PLLLDVHIHK PMLNARTWMD 351 400 bmy_04395T0/1-656 ALLAFFPGLQ VLKGDIRPAI ETHEMLYQVI KKHNFLPEAF TTDFRVHWAQ ENSP00000318147/1-932 ALLAFFPGLQ VLKGDIRPAI ETHEMLYQVI KKHNFLPEAF TTDFRVHWAQ ENSBTAP00000025655/1-933 ALLAFFPGLQ VLKGDIRPAI ETHEMLYQVI KKHNFLPEAF TTDFRVHWAQ BACU001525/1-773 ---------- VLKGDIRPAI ETHEMLYQVI KKHNFLPEAF TTDFRVHWAQ ENSTTRP00000007195/1-797 ALLAFFPGLQ VLKGDIRPAI ETHEMLYQVI KKHNFLPEAF TTDFRVHWAQ 401 450 bmy_04395T0/1-656 HPLRPEFAES TYFLYKATGD PYYLEVGKTL IENLNKYARV PCGFAAMKDV ENSP00000318147/1-932 HPLRPEFAES TYFLYKATGD PYYLEVGKTL IENLNKYARV PCGFAAMKDV ENSBTAP00000025655/1-933 HPLRPEFAES TYFLYKATGD PYYLEVGKTL IENLNKYARV PCGFAAMKDV BACU001525/1-773 HPLRPEFAES TYFLYKATGD PYYLEVGKTL IENLNKYARV PCGFAAMKDV ENSTTRP00000007195/1-797 HPLRPEFAES TYFLYKATGD PYYLEVGKTL IENLNKYARV PCGFAAMKDV 451 500 bmy_04395T0/1-656 RTGSHEDRMD SFFLAEMFKY LYLLFADKED VIFDIEDYIF TTEAHLLPLW ENSP00000318147/1-932 RTGSHEDRMD SFFLAEMFKY LYLLFADKED IIFDIEDYIF TTEAHLLPLW ENSBTAP00000025655/1-933 RTGSHEDRMD SFFLAEMFKY LYLLFADKED IIFDIEDYIF TTEAHLLPLW BACU001525/1-773 RTGSHEDRMD SFFLAEMFKY LYLLFADKED VIFDIEDYIF TTEAHLLPLW ENSTTRP00000007195/1-797 RTGSHEDRMD SFFLAEMFKY LYLLFADKED VIFDIEDYIF TTEAHLLPLW 501 550 bmy_04395T0/1-656 LSTTNQRISK KNTTSEYTEL DDSNFDWTCP NTQILFPNDP LYAQSIREPL ENSP00000318147/1-932 LSTTNQSISK KNTTSEYTEL DDSNFDWTCP NTQILFPNDP LYAQSIREPL ENSBTAP00000025655/1-933 LSTTNQRVSK KNTTSEYTEL DDSNFDWTCP NTQILFPNDP LYAQSIREPL BACU001525/1-773 LSTTNQRLSK KNTTSEYTEL DDSNFDWTCP NTQILFPNDP LYAQSIREPL ENSTTRP00000007195/1-797 LSTTNQRISK KNTTSEYTEL DDSNFDWTCP NTQILFPNDP LYAQSIREPL 551 600 bmy_04395T0/1-656 KNVVDKSSLP IIPFSREESF RSGAKPPLRA RDFMATNPEH LEILKKMGVS ENSP00000318147/1-932 KNVVDKSCPR GIIRV-EESF RSGAKPPLRA RDFMATNPEH LEILKKMGVS ENSBTAP00000025655/1-933 KNVVDKSCPR GIIRV-EESL RSGAKPPLRA RDFMATNPEH LEILKKMGVS BACU001525/1-773 KNVVDKSCPR GIIRVREESF RSGAKPPLRA RDFMATNPEH LEILKKMGVS ENSTTRP00000007195/1-797 KNVVDKSCPR GIIRV-EESF RSGAKPPLRA RDFMATNPEH LEILKKMGVS 601 650 bmy_04395T0/1-656 LIHLKDGRVQ LVQHAIQAAS SIDAEDGLRF MQEMIELSSQ QQKEQQLPPR ENSP00000318147/1-932 LIHLKDGRVQ LVQHAIQAAS SIDAEDGLRF MQEMIELSSQ QQKEQQLPPR ENSBTAP00000025655/1-933 LIHLKDGRVQ LVQHAIQAAS SIDAEDGLRF MQEMIELSSQ QQKEQQLPPR BACU001525/1-773 LIHLKDGRVQ LVQHAIQAAS SIDAEDGLRF MQEMIELSSQ QQKEQQLPPR ENSTTRP00000007195/1-797 LIHLKDGRVQ LVQHAIQAAS SIDAEDGLRF MQEMIELSSQ QQKEQQLPPR 651 700 bmy_04395T0/1-656 AVQIVSHPFF GRVVLTAGPA QFGLDLSKHK ETRGFVASSK PYNGCSELTN ENSP00000318147/1-932 AVQIVSHPFF GRVVLTAGPA QFGLDLSKHK ETRGFVASSK PSNGCSELTN ENSBTAP00000025655/1-933 AVQIVSHPFF GRVVLTAGPA QFGPDLSKHK ETRGFVASSK PYNGCSELTN BACU001525/1-773 AVQIVSHPFF GRVVLTAGPA QFGLDLSKHK ETRGFVASSK PYNGCSELTN ENSTTRP00000007195/1-797 AVQIVSHPFF GRVVLTAGPA QFGLDLSKHK ETRGFVASSK PYNGCSELTN 701 750 bmy_04395T0/1-656 PEAVMGKIAL IQRGQCMFAE KARNIQNAGA IGGIVIDDNE GSSSDTAPLF ENSP00000318147/1-932 PEAVMGKIAL IQRGQCMFAE KARNIQNAGA IGGIVIDDNE GSSSDTAPLF ENSBTAP00000025655/1-933 PEAVMGKIAL IQRGQCMFAE KARNIQNAGA IGGIVIDDNE GSSSDTAPLF BACU001525/1-773 PESVMGKIAL IQRGQCMFAE KARNIQNAGA IGGIVIDDNE GSSSDTAPLF ENSTTRP00000007195/1-797 PEAVMGKIAL IQRGQCMFAE KARNIQNAGA IGGIVIDDNE GSSSDTAPLF 751 800 bmy_04395T0/1-656 QMAGDGKDTD DITIPMLFLF SKEGSIILDA IREYEEVEVL LSDKAKDR-- ENSP00000318147/1-932 QMAGDGKDTD DIKIPMLFLF SKEGSIILDA IREYEEVEVL LSDKAKDR-- ENSBTAP00000025655/1-933 QMAGDGKDTD DITIPMLFLF SKEGGIILDA IREYEEVEVL LSDKAKDRGT BACU001525/1-773 QMAGDGKDTD DITIPMLFLF SKEGSIILDA IREYEEVEVL LSDKAKDRGK ENSTTRP00000007195/1-797 QMAGDGKDTD DITIPMLFLF SKEGSIILDA IREYEEVEVL LSDKAKDR-- 801 850 bmy_04395T0/1-656 DPEMENEEPP SSENDSQNQS AEQIASSSQE VDLVDQESPE ESSLNSHPES ENSP00000318147/1-932 DPEMENEEQP SSENDSQNQS GEQISSSSQE VDLVDQESSE ENSLNSHPES ENSBTAP00000025655/1-933 DPEMENEEQP SSENDS--QS AEQIASRSQE IDLVDQESPE ESSVNSHPEA BACU001525/1-773 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007195/1-797 ---------- ---------- ---------- ---------- ---------- 851 900 bmy_04395T0/1-656 LSPADTDDAA SISPSEQNSN PTENHETTSL DGECTDLDNQ LQEQSETEED ENSP00000318147/1-932 LSLADMDNAA SISPSEQTSN PTENHETTNL NGECTDLDNQ LQEQSETEED ENSBTAP00000025655/1-933 LSPVDTDSAA SVSSSEQDSN PMENLETTSL DGECTDLDNQ LQEQPETEED BACU001525/1-773 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007195/1-797 ---------- ---------- ---------- ---------- ---------- 901 950 bmy_04395T0/1-656 SNPNVSWGKK VQPIDSILAD WNEDIEAFEM MEKDEL ENSP00000318147/1-932 SNPNVSWGKK VQPIDSILAD WNEDIEAFEM MEKDEL ENSBTAP00000025655/1-933 SNPNVSWGKK AQPIDSILAD WNEDIEAFEM MDKDEL BACU001525/1-773 -------GKK SFVFSLALTF LT-------- ------ ENSTTRP00000007195/1-797 ---------- ---------- ---------- ------