KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:26:54 2014 Check: 00 .. Name: bmy_02337T0/1-318 Len: 544 Check: 2501 Weight: 1.00 Name: ENSP00000262134/1-544 Len: 544 Check: 4311 Weight: 1.00 Name: ENSTTRP00000001109/1-544 Len: 544 Check: 1814 Weight: 1.00 Name: ENSBTAP00000025661/1-544 Len: 544 Check: 3278 Weight: 1.00 // 1 50 bmy_02337T0/1-318 ---------- ---------- ---------- -QASFFPPPV RNPFVQRTRL ENSP00000262134/1-544 MSRCAQAAEV AATVPGAGVG NVGLRPPMVP RQASFFPPPV PNPFVQQTQI ENSTTRP00000001109/1-544 MNRCAEAAAV AASGPGAGVG NAGQRPPRVP RQASFFPPPV RNPFVQQTRL ENSBTAP00000025661/1-544 MNRCADARAV AATVPGADVG NAGLRPPMVP RQASFFPPPV LNPFVQQTRL 51 100 bmy_02337T0/1-318 GAARRIQIFF LGIILLPIRA LLLALILLLA WPFAAISTAC CPEKLTHPIT ENSP00000262134/1-544 GSARRVQIVL LGIILLPIRV LLVALILLLA WPFAAISTVC CPEKLTHPIT ENSTTRP00000001109/1-544 GAARRIQIFF LGIILLPIRA LLLALILLLA WLFAAISTTC CPEKLTHPIT ENSBTAP00000025661/1-544 GVARRIQIFF LGIILLPIRA LLVAIILLLS WSLAAISTAC CPEKLTHPIT 101 150 bmy_02337T0/1-318 GWKRKINQPV LKFLGRAMFF SMGFIVTVKG KIASPVEAPI FVVAPHSTFF ENSP00000262134/1-544 GWRRKITQTA LKFLGRAMFF SMGFIVAVKG KIASPLEAPV FVAAPHSTFF ENSTTRP00000001109/1-544 GWKRTITQPV LKFLGHAMFF SMGFIVTVKG KIASPVEAPI FVVAPHSTFF ENSBTAP00000025661/1-544 GWKRKITHPV LKFLGHAMFF SMGFVVTVKG KIATPLEAPI FVVAPHSTFF 151 200 bmy_02337T0/1-318 DGIACVVAGL PSVVSRHENV RVPLIGRILR ALQPVLVSRV DPDSRKNTIN ENSP00000262134/1-544 DGIACVVAGL PSMVSRNENA QVPLIGRLLR AVQPVLVSRV DPDSRKNTIN ENSTTRP00000001109/1-544 DGIACVVAGL PSIVSRHENV QVPLIGRILR ALQPVLVSRV DPDSRKNTIN ENSBTAP00000025661/1-544 DGIACVAAGL PSIVSRNENV QVPLVGRILR ALQPVLVSRV DPDSRKNTIN 201 250 bmy_02337T0/1-318 EIIRRATSGG EWPQILVFPE GTCTNRSCLI TFKPG----- ---------- ENSP00000262134/1-544 EIIKRTTSGG EWPQILVFPE GTCTNRSCLI TFKPGAFIPG VPVQPVLLRY ENSTTRP00000001109/1-544 EIIRRATSGG EWPQILVFPE GTCTNRSCLI TFKPGAFIPG VPVQPVLLRY ENSBTAP00000025661/1-544 EIIRRATSGG EWPQILVFPE GTCTNRSCLI TFKPGAFIPG VPVQPILLRY 251 300 bmy_02337T0/1-318 ---------- --------YC DMDMARIYI- ----FMPVQX PNDEEKSDPV ENSP00000262134/1-544 PNKLDTVTWT WQGYTFIQLC MLTFCQLFTK VEVEFMPVQV PNDEEKNDPV ENSTTRP00000001109/1-544 PNKLDTVTWT WQGYKFIQLC VLTCCQPFTK VEVEFMPVQI PNDEEKSDPV ENSBTAP00000025661/1-544 PNKLDTVTWT WQGYTFIQLC VLTWCQPFTR VEVEFMPVQV PSDEERCDPV 301 350 bmy_02337T0/1-318 LFASRVRNLM AE-------- ---------- ---------- ---------- ENSP00000262134/1-544 LFANKVRNLM AEALGIPVTD HTYEDCRLMI SAGQLTLPME AGLVEFTKIS ENSTTRP00000001109/1-544 LFASTVRNLM AEALRIPVTD HTYEDCRLMI SAGQLTLPME AGLVEFTKIS ENSBTAP00000025661/1-544 LFASTIRNVM AEALKIPVTD HTYEDCRLMI SAGQLTLPME AGLVEFTKIS 351 400 bmy_02337T0/1-318 ----LDWDGI RKHLDEYAAI ASSSKGGRIG IEEFAEYLKL PVSDVLRQLF ENSP00000262134/1-544 RKLKLDWDGV RKHLDEYASI ASSSKGGRIG IEEFAKYLKL PVSDVLRQLF ENSTTRP00000001109/1-544 RKLKLDWDGI RKHLDEYAAI ASSSKGGRIG IEEFAEYLKL PVSDVLRQLF ENSBTAP00000025661/1-544 RKLKLDWDGI RKHLDEYAAI ASSSKGGRIG IEEFAEYLKL PVSDVLRQLF 401 450 bmy_02337T0/1-318 ALFDRRIDLA LDIDHELV-- ---------- ---------- ---------- ENSP00000262134/1-544 ALFDRNHDGS IDFREYVIGL AVLCNPSNTE EIIQVAFKLF DVDEDGYITE ENSTTRP00000001109/1-544 ALFDRNHDGS IDFREYVIGL AVLCNPANTE EIIQVAFKLF DVDKDGFITE ENSBTAP00000025661/1-544 ALFDRNHDGS IDFREYVIGL AVLCNPANTE EIIQVAFKLF DVDEDGFITE 451 500 bmy_02337T0/1-318 --FKTLL--- -------ISN ILE------- ---------- ---------- ENSP00000262134/1-544 EEFSTILQAS LGVPDLDVSG LFKEIAQGDS ISYEEFKSFA LKHPEYAKIF ENSTTRP00000001109/1-544 EEFATIMQAS LGVPDLDVSG LFKEIAQGDS VSYEEFKSFA LKHPEYAKIF ENSBTAP00000025661/1-544 EEFSTILQAS LGVPDLDVSG LFKEIAQGDS VSYEEFKSFA LKHPEYAKIF 501 550 bmy_02337T0/1-318 ---------- ---------- ---------- ---------- ---- ENSP00000262134/1-544 TTYLDLQTCH VFSLPKEVQT TPSTASNKVS PEKHEESTSD KKDD ENSTTRP00000001109/1-544 TTYLDLQTCH VFSLPKEVQA TSSVVSNKVS PESHEESTSD KKDD ENSBTAP00000025661/1-544 TTYLDLQTCH VFSLPKEVQA TPSVVSNKVS PESHEESTSD KKDD