KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 17:26:56 2014 Check: 00 ..
Name: ENSTTRP00000000047/1-1082 Len: 1089 Check: 8421 Weight: 1.00
Name: ENSP00000257981/1-1083 Len: 1089 Check: 7236 Weight: 1.00
Name: ENSBTAP00000025668/1-1074 Len: 1089 Check: 9896 Weight: 1.00
Name: bmy_05777T0/1-1056 Len: 1089 Check: 8050 Weight: 1.00
Name: BACU008000/1-1085 Len: 1089 Check: 2445 Weight: 1.00
//
1 50
ENSTTRP00000000047/1-1082 MPAMRGLLAP QN-FLDTIVT RFDGTHSNFV LGNAQVAGLF PVVYCSDGFC
ENSP00000257981/1-1083 MPAMRGLLAP QNTFLDTIAT RFDGTHSNFV LGNAQVAGLF PVVYCSDGFC
ENSBTAP00000025668/1-1074 MPAMRGLLAP QNTFLDTIAT RFDGTHSNFV LGNAQVAGLF PVVYCSDGFC
bmy_05777T0/1-1056 MPAMRGLLAP QNTFLDTIAT RFDGTHSNFV LGNAQVAGLF PVVYCSDGFC
BACU008000/1-1085 ---MRGLLAP QNTFLDTIAT RFDGTHSNFV LGNAQVAGLF PVVYCSDGFC
51 100
ENSTTRP00000000047/1-1082 DLTGFSRAEV MQRGCACSFL YGPDTSELVR QQIRKALDEH KEFKAELILY
ENSP00000257981/1-1083 DLTGFSRAEV MQRGCACSFL YGPDTSELVR QQIRKALDEH KEFKAELILY
ENSBTAP00000025668/1-1074 DLTGFSRAEV MQRGCACSFL YGPDTSELVR QQIRKALDEH KEFKAELILY
bmy_05777T0/1-1056 DLTGFSRAEV MQRGCACSFL YGPDTSELVR QQIRKALDEH KEFKAELILY
BACU008000/1-1085 DLTGFSRAEV MQRGCACSFL YGPDTSELVR HQIRKALDEH KEFKAKLILY
101 150
ENSTTRP00000000047/1-1082 RKSGLPFWCL LDVIPIK--- --NEKGEVAL FLVSHKDISD TKNRGGPDSW
ENSP00000257981/1-1083 RKSGLPFWCL LDVIPIK--- --NEKGEVAL FLVSHKDISE TKNRGGPDRW
ENSBTAP00000025668/1-1074 RKSGLPFWCL LDVIPIK--- --NEKGEVAL FLVSHKDISE TKNRGGPDSW
bmy_05777T0/1-1056 RKSGLPFWCL LDVIPIK--- --NEKGEVAL FLVSHKDISD TKNRGGPDSW
BACU008000/1-1085 RKXXXXXXXX XXXXXXXXXX XANEKGEVAL FLVSHKDISD TKNRGGPDSW
151 200
ENSTTRP00000000047/1-1082 KETGGGRRRY GRAGSKGFNA NRRRSRAVLY HLSGHLQKQP KGKHKLNKGV
ENSP00000257981/1-1083 KETGGGRRRY GRARSKGFNA NRRRSRAVLY HLSGHLQKQP KGKHKLNKGV
ENSBTAP00000025668/1-1074 KESGGGRRRY GRAGSKGFNA NRRRSRAVLY HLSGHLQKQP KGKHKLNKGV
bmy_05777T0/1-1056 KETGGGRRRY GRAGAKGFNA NRRRSRAVLY HLSGHLQKQP KGKHKLNKGV
BACU008000/1-1085 KETGGGRRRY GRAGAKGFNA NRRRSRAVLY HLSGHLQKQP KGKHKLNKGV
201 250
ENSTTRP00000000047/1-1082 FGEKPNLPEY KVAAIRKSPF ILLHCGALRA TWDGFILLAT LYVAVTVPYS
ENSP00000257981/1-1083 FGEKPNLPEY KVAAIRKSPF ILLHCGALRA TWDGFILLAT LYVAVTVPYS
ENSBTAP00000025668/1-1074 FGEKPNLPEY KVAAIRKSPF ILLHCGALRA TWDGFILLAT LYVAVTVPYS
bmy_05777T0/1-1056 FGEKPNLPEY KVAAIRKSPF ILLHCGALRA TWDGFILLAT LYVAVTVPYS
BACU008000/1-1085 FGEKPNLPEY KVAAIRKSPF ILLHCGSLRA TWDGFILLAT LYVAVTVPYS
251 300
ENSTTRP00000000047/1-1082 VCVSTAREPS AARGPPSVCD LAVEVLFILX XXXXXXXXXX XXXXXXXXXX
ENSP00000257981/1-1083 VCVSTAREPS AARGPPSVCD LAVEVLFILD IVLNFRTTFV SKSGQVVFAP
ENSBTAP00000025668/1-1074 VCVSTAREPS AARGPPSVCD LAVEVLFILD IVLNFRTTFV SKSGQVVFAP
bmy_05777T0/1-1056 VCVSTAREPS AARGPPSVCD LAVE------ ---------- ----------
BACU008000/1-1085 VCVSTAREPS AARGPPSVCD LAVEVLFILD IVLNFRTTFV SKSGQVVFAP
301 350
ENSTTRP00000000047/1-1082 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
ENSP00000257981/1-1083 KSICLHYVTT WFLLDVIAAL PFDLLHAFKV NVYFGAHLLK TVRLLRLLRL
ENSBTAP00000025668/1-1074 KSICLHYVTT WFLLDVIAAL PFDLLHAFKV NVYFGAHLLK TVRLLRLLRL
bmy_05777T0/1-1056 -SICLHYVST WFLLDVIAAL PFDLLHAFKV NVYFGAHLLK TVRLLRLLRL
BACU008000/1-1085 KSICLHYVST WFLLDVIAAL PFDLLHAFKV NVYFGAHLLK TVRLLRLLRL
351 400
ENSTTRP00000000047/1-1082 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
ENSP00000257981/1-1083 LPRLDRYSQY SAVVLTLLMA VFALLAHWVA CVWFYIGQRE IESSESELPE
ENSBTAP00000025668/1-1074 LPRLDRYSQY SAVVLTLLMA VFALLAHWVA CVWFYIGQRE IESSASELPE
bmy_05777T0/1-1056 LPRLDRYSQY SAVVLTLLMA VFALLAHWVA CIWFYIGQRE IESSASELPE
BACU008000/1-1085 LPRLDRYSQY SAVVLTLLMA VFALLAHWVA CIWFYIGQRE IESSASELPE
401 450
ENSTTRP00000000047/1-1082 XXWLQELARR LETPYYLVGR SPAIGNSSGQ SDNCSSSSSE ANRTGPELLG
ENSP00000257981/1-1083 IGWLQELARR LETPYYLVGR RPAGGNSSGQ SDNCSSS-SE ANGTGLELLG
ENSBTAP00000025668/1-1074 IGWLQELARR LETPYYLVGR SPAAGNSSGQ SDNCSSSFGE ANRTGPELLG
bmy_05777T0/1-1056 IGWLQELARR LETPYYLVGR SPAIGNSSGQ SDNCSSSGSE ANRTGPELLG
BACU008000/1-1085 IGWLQELARR LETPYYLVGR SPAIGNSSGQ SDNCSSSGSE ANRTGPELLG
451 500
ENSTTRP00000000047/1-1082 GPSLRSAYIT SLYFALSSLT SVGFGNVSAN TDTEKIFSIC TMLIGXXXXX
ENSP00000257981/1-1083 GPSLRSAYIT SLYFALSSLT SVGFGNVSAN TDTEKIFSIC TMLIGALMHA
ENSBTAP00000025668/1-1074 GPSLRSAYIT SLYFALSSLT SVGFGNVSAN TDTEKIFSIC TMLIGALMHA
bmy_05777T0/1-1056 GPSLRSAYIT SLYFALSSLT SVGFGNVSAN TDTEKIFSIC TMLIGALMHA
BACU008000/1-1085 GPSLRSAYIT SLYFALSSLT SVGFGNVSAN TDTEKIFSIC TMLIGALMHA
501 550
ENSTTRP00000000047/1-1082 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXRIPKPL KQRMLEYFQA
ENSP00000257981/1-1083 VVFGNVTAII QRMYARRFLY HSRTRDLRDY IRIHRIPKPL KQRMLEYFQA
ENSBTAP00000025668/1-1074 VVFGNVTAII QRMYARRFLY HSRTRDLRDY IRIHRIPKPL KQRMLEYFQA
bmy_05777T0/1-1056 VVFGNVTAII QRMYARRFLY HSRTRDLRDY IRIHRIPKPL KQRMLEYFQA
BACU008000/1-1085 VVFGNVTAII QRMYARRFLY HSRTRDLRDY IRIHRIPKPL KQRMLEYFQA
551 600
ENSTTRP00000000047/1-1082 TWAVNNGIDT TELLQSLPDE LRADIAMHLH KEVLQLPLFE AASRGCLRAL
ENSP00000257981/1-1083 TWAVNNGIDT TELLQSLPDE LRADIAMHLH KEVLQLPLFE AASRGCLRAL
ENSBTAP00000025668/1-1074 TWAVNNGIDT TELLQSLPDE LRADIAMHLH KEVLQLPLFE AASRGCLRAL
bmy_05777T0/1-1056 TWAVNNGIDT TELLQSLPDE LRADIAMHLH KEVLQLPLFE AASRGCLRAL
BACU008000/1-1085 TWAVNNGIDT TELLQSLPDE LRADIAMHLH KEVLQLPLFE AASRGCLRAL
601 650
ENSTTRP00000000047/1-1082 SLALRPAFCT PGEYLIHQGD ALQALYFVCS GSMEVLKGGT VLAILGKGDL
ENSP00000257981/1-1083 SLALRPAFCT PGEYLIHQGD ALQALYFVCS GSMEVLKGGT VLAILGKGDL
ENSBTAP00000025668/1-1074 SLALRPAFCT PGEYLIHQGD ALQALYFVCS GSMEVLKGGT VLAILGKGDL
bmy_05777T0/1-1056 SLALRPAFCT PGEYLIHQGD ALQALYFVCS GSMEVLKGGT VLAILGKGDL
BACU008000/1-1085 SLALRPAFCT PGEYLIHQGD ALQALYFVCS GSMEVLKGGT VLAILGKGDL
651 700
ENSTTRP00000000047/1-1082 IGCELPRREQ VVKANADVKG LTYCVLQCLQ LAGLHESLAL YPEFAPRFSR
ENSP00000257981/1-1083 IGCELPRREQ VVKANADVKG LTYCVLQCLQ LAGLHDSLAL YPEFAPRFSR
ENSBTAP00000025668/1-1074 IGCELPRREQ VVKANADVKG LTYCVLQCLQ LAGLHESLAL YPEFAPRFSR
bmy_05777T0/1-1056 IGCELPGREQ VVKANADVKG LTYCVLQCLQ LAGLHESLAL YPEFAPRFSR
BACU008000/1-1085 IGCELPRREQ VVKANADVKG LTYCVLQCLQ LAGLHESLAL YPEFAPRFSR
701 750
ENSTTRP00000000047/1-1082 GLRGELSYNL GAGGGPAEVD TSSLSGDNTL MSTLEEKETD GEQGPTASPA
ENSP00000257981/1-1083 GLRGELSYNL GAGGGSAEVD TSSLSGDNTL MSTLEEKETD GEQGPTVSPA
ENSBTAP00000025668/1-1074 GLRGELSYNL GAGGGPAEAD TSSLSGDNTL MSTLEEKETD GEQGPAASPA
bmy_05777T0/1-1056 GLRGELSYNL GACGGPAEAD TSSLSGDNTL MSTLEEKETD GEQGPAASPA
BACU008000/1-1085 GLRGELSYNL GAGGGPAEVD TSSLSGDNTL MSTLEEKETD GEQGPAASPA
751 800
ENSTTRP00000000047/1-1082 PADEPSSPLL SPSCTSSSSA AKLLSPRRPA PRHPLGGRGR PGRAGALQAE
ENSP00000257981/1-1083 PADEPSSPLL SPGCTSSSSA AKLLSPRRTA PRPRLGGRGR PGRAGALKAE
ENSBTAP00000025668/1-1074 PADEPSSPLL SPGCTSSSSA AKLLSPRRTV PRSRLGGRGR PGRAGALQAE
bmy_05777T0/1-1056 PADEPSSPLL SPSCTSSSSA AKLLSPRRTA PRPPLGGRGR PGRAGALQAE
BACU008000/1-1085 PADEPSSPLL SPSCTSSSSA AKLLSPRRTA PRPPLGGRGR PGRAGTLQAE
801 850
ENSTTRP00000000047/1-1082 AGPSAHPQSL EGLRLPSVPW NVPPDLSPRV VDGIEDGCGS DQPKFSFRVR
ENSP00000257981/1-1083 AGPSAPPRAL EGLRLPPMPW NVPPDLSPRV VDGIEDGCGS DQPKFSFRVG
ENSBTAP00000025668/1-1074 AGPSTHPRSL EGLRLPPVPW NVPPDLSPRV VDGIEDGCGS DQPQFSFRVR
bmy_05777T0/1-1056 AGPSAHSRNL EGLRLPSVPW NVPPDLSPRV VDGIEDGCGS DQPKFSFRVR
BACU008000/1-1085 AGPSAHPRSL EGLQLPSVPW NVPPDLSPRV VDGIEDGCGS DQPKFSFRVR
851 900
ENSTTRP00000000047/1-1082 RSGPECSSSP SPGPENSLLT VPLGPSEVRN TDMLDKLRQA VMELSEQVLQ
ENSP00000257981/1-1083 QSGPECSSSP SPGPESGLLT VPHGPSEARN TDTLDKLRQA VTELSEQVLQ
ENSBTAP00000025668/1-1074 QSGPECSSSP SPGPENGLLT VPLGPSEVRN TDTLDKLRQA VMELSEQVLQ
bmy_05777T0/1-1056 RSGPECSSSP SPGPENSLRT VPLGPSEVRN TDMLDKLRQA VMELSEQVQQ
BACU008000/1-1085 RSGPECSSSP SPGPENSLRT VPLGPSEVRN TDMLDKLRQA VMELSEQVQQ
901 950
ENSTTRP00000000047/1-1082 MREGLQSLRQ AVQLILAPHG EGPSPRASGE GPCPASASGL LQPLCVDTGT
ENSP00000257981/1-1083 MREGLQSLRQ AVQLVLAPHR EGPCPRASGE GPCPASTSGL LQPLCVDTGA
ENSBTAP00000025668/1-1074 MREGLQSLRQ AVQLVLAPRG ---------E GPCPAGASGL LQPLCVDTGA
bmy_05777T0/1-1056 MREGLQSLRQ AVQLILAPHG EGPCPRASAE GPCPASASGL LQPLCVDTGT
BACU008000/1-1085 MREGLQSLRQ AVQLILAPQG EGPCPRASAE GPCPASASGL LQPLCVDTGT
951 1000
ENSTTRP00000000047/1-1082 SSYCLQPPAG SVLSGTRPHP RPGPPPLVAP WPWGPPASQS SPWPQATAFW
ENSP00000257981/1-1083 SSYCLQPPAG SVLSGTWPHP RPGPPPLMAP WPWGPPASQS SPWPRATAFW
ENSBTAP00000025668/1-1074 SSCCLQPSAG SVLSGTWPHP RPGPPPLMAP WPWGPPASQS SPWPRATAFW
bmy_05777T0/1-1056 SSYCLQPPAG SVLSGTRPHP RPGPPPLVAP WPWGPPASQS SPWPQATAFW
BACU008000/1-1085 SSYCLQPPAG SVLSGTRPHP RPGPPPLVAP WPWGPPASQS SPWPQATAFW
1001 1050
ENSTTRP00000000047/1-1082 TSTSDSEPPG SGELCPEPST PGPPPP-EEG ARTGPPEPMN QAEAASTGEP
ENSP00000257981/1-1083 TSTSDSEPPA SGDLCSEPST PASPPPSEEG ARTGPAEPVS QAEATSTGEP
ENSBTAP00000025668/1-1074 TSTSDSEPPG SGELCPEPST PGLPPP-EEG ARTGPPEPMT QAEAASTGEP
bmy_05777T0/1-1056 TSTSDTEPPG SGELCPEPST PGPLPP-EEG ARTGPPEPMN QAEAASTGEP
BACU008000/1-1085 TSTSDSEPPG SGELCPEPST PGPPPP-EEG ARTGPPEPMN QAEAASTGEP
1051 1100
ENSTTRP00000000047/1-1082 PPGAGGLALP WEPQSLEMVL IGCHGSGTVQ WTQEEGTGV
ENSP00000257981/1-1083 PPGSGGLALP WDPHSLEMVL IGCHGSGTVQ WTQEEGTGV
ENSBTAP00000025668/1-1074 PPASGGHALP WEPHSLEMVL IGCHGSGTVQ WTQEEGTGV
bmy_05777T0/1-1056 PPGSGGLALP WEPHSLEMVL IGCHGSGTVQ WTQEEGTGV
BACU008000/1-1085 PPGSGGLALP WEPHSLEMVL IGCHGSGTVQ WTEEEGTGV