KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:26:57 2014 Check: 00 .. Name: ENSP00000215939/1-252 Len: 254 Check: 6201 Weight: 1.00 Name: ENSBTAP00000025671/1-253 Len: 254 Check: 4696 Weight: 1.00 Name: bmy_07985T0/1-249 Len: 254 Check: 9564 Weight: 1.00 Name: BACU008834/1-249 Len: 254 Check: 779 Weight: 1.00 Name: ENSTTRP00000008938/1-241 Len: 254 Check: 2269 Weight: 1.00 // 1 50 ENSP00000215939/1-252 MSQAAKASAS ATVAVNPGPD TKGKGAPPAG TSPSPGTTLA PTTVPITSAK ENSBTAP00000025671/1-253 MSQPA-AKAS ATAAVNPGPD GKGKAGPPPG PAPGSGPAPA PAPAPAQPAP bmy_07985T0/1-249 MSQPA-AKAS ATAAVNPEPD GKEKGAPPPG SAPGSG---- PAQAPAQQVP BACU008834/1-249 MSQPA-AKAS ATAAVNPEPD GKEKGAPPPG SAPGSG---- PAQAPAQRVP ENSTTRP00000008938/1-241 MSQPA-AKAS ATAAVNPGTD GK-------G SAPGSG---- PAQAPAQRVP 51 100 ENSP00000215939/1-252 AA--ELPPGN YRLVVFELEN FQGRRAEFSG ECSNLADRGF DRVRSIIVSA ENSBTAP00000025671/1-253 AAKAELPPGS YKLVVFEQEN FQGRRVEFSG ECLNLGDRGF ERVRSIIVTS bmy_07985T0/1-249 AAKGDLPPGN YKLVVFEQEN FQGRRVEFSG ECLNLGDHGF DRVRSLIVTS BACU008834/1-249 AAKGDLPPGN YKLVVFEQEN FQGRRVEFSG ECLNLGDRGF DRVRSLIVTS ENSTTRP00000008938/1-241 AAK-DLPPGS YKLVVFEQEN FQGRRVEFSG ECLNLGDRGF DRVRSLIVVS 101 150 ENSP00000215939/1-252 GPWVAFEQSN FRGEMFILEK GEYPRWNTWS SSYRSDRLMS FRPIKMDAQE ENSBTAP00000025671/1-253 GPWVAFEQSN FRGEMFVLEK GEYPRWDTWS SSYRSDRLMS FRPIKMDAQE bmy_07985T0/1-249 GPWVAFEQSN FRGEMFILEK GEYPRWDTWS SSYRSDRLMS FRPIRMDAQE BACU008834/1-249 GPWVAFEQSN FRGEMFILDK GEYPRWDTWS SSYRSDRLMS FRPIRMDAQE ENSTTRP00000008938/1-241 GPWVAFEQSN FRGEMFILEK GEYPRWDTWS SSYRSDRLMS FRPIRMDAQA 151 200 ENSP00000215939/1-252 HKISLFEGAN FKGNTIEIQG DDAPSLWVYG FSDRVGSVKV SSGTWVGYQY ENSBTAP00000025671/1-253 HKLCLFEGAN FKGNTMEIQE DDVPSLWVYG FCDRVGSVRV SSGTWVGYQY bmy_07985T0/1-249 HKLCLFEGAN FKGNTMEIQE DDVPSLWVYG FCDRVGSVKV ASGTWVGYQY BACU008834/1-249 HKLCLYEGAN FKGNTMEIQE DDVPSLWVYG FCDRVGSVKV ASGTWVGYQY ENSTTRP00000008938/1-241 HKLCLFEGAN FKGNTMEIQE DDVPSLWVYG FCDRVGSVKV ASGTWVGYQY 201 250 ENSP00000215939/1-252 PGYRGYQYLL EPGDFRHWNE WGAFQPQMQS LRRLRDKQWH LEGSFPVLAT ENSBTAP00000025671/1-253 PGYRGYQYLL EPGDFRHWNE WGAFQPQMQA VRRLRDRQWH REGCFPVLAA bmy_07985T0/1-249 PGYRGYQYLL EPGDFRHWNE WGAFQPQMQA VRRLRDRQWH REGCFPALAA BACU008834/1-249 PGYRGYQYLL EPGDFRHWNE WGAFQPQMQA VRRLRDRQWH REGCFPTLAA ENSTTRP00000008938/1-241 PGYRGYQYLL EPGDFRHWNE WGAFQPQMQA VRRLRDRQWH REGCFPVLAA 251 300 ENSP00000215939/1-252 EPPK ENSBTAP00000025671/1-253 EPPK bmy_07985T0/1-249 EPPK BACU008834/1-249 EPPK ENSTTRP00000008938/1-241 EPPK