KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:26:57 2014 Check: 00 .. Name: ENSP00000346805/1-196 Len: 359 Check: 5055 Weight: 1.00 Name: BACU008835/1-359 Len: 359 Check: 7501 Weight: 1.00 Name: ENSTTRP00000008944/1-196 Len: 359 Check: 7140 Weight: 1.00 Name: ENSBTAP00000025674/1-196 Len: 359 Check: 6783 Weight: 1.00 Name: bmy_07986T0/1-179 Len: 359 Check: 2377 Weight: 1.00 // 1 50 ENSP00000346805/1-196 ---------- -MTLQCTKSA GPWKMVVWDE DGFQGRRHEF TAECPSVLEL BACU008835/1-359 MFSGSISETS NMSLQCTKSA GHWKIVVWDE EGFQGRRHEF TAECPSVLEL ENSTTRP00000008944/1-196 ---------- -MSLQCTKSA GHWKIVVWDE EGFQGRRHEF TAECPSVLEL ENSBTAP00000025674/1-196 ---------- -MSLQCTKSA GHWKIVVWDE EGFQGRRHEF TAECPSVLEL bmy_07986T0/1-179 ---------- ---------- ----IVVWDE EGFQGRRHEF TAECPSVLEL 51 100 ENSP00000346805/1-196 GFETVRSLKV LSGAWVGFEH AGFQGQQYIL ERGEYPSWDA WGGNTAYPAE BACU008835/1-359 GFETVRSLKV LSGAWVGFEH AGFQGQQYVL ERGEYPSWDA WSGNTSYPAE ENSTTRP00000008944/1-196 GFETVRSLKV LSGAWVGFEH AGFQGQQYVL ERGEYPSWDA WSGNTSYPAE ENSBTAP00000025674/1-196 GFETVRSLKV LSGAWVGFEH AGFQGQQYVL ERGEYPSWDA WSGNTSYPAE bmy_07986T0/1-179 GFETVRSLKV LSGAWVGFEH AGFQGQQYVL ERGEYPSWDA WSGNTSYPAE 101 150 ENSP00000346805/1-196 RLTSFRPAAC ANHRDSRLTI FEQENFLGKK GELSDDYPSL QAMGWEGNEV BACU008835/1-359 RLTSFRPVAC ANHRDSRLTI FEQENFLGKK GELSDDYPSL QAMGWDGNEV ENSTTRP00000008944/1-196 RLTSFRPVAC ANHRESRLTI FEQENFLGKK GELSDDYPSL QAMGWDGNEV ENSBTAP00000025674/1-196 RLTSFRPVAC ANHRDSRLTI FEQENFLGRK GELSDDYPSL QAMGWDGNEV bmy_07986T0/1-179 RLTSFRP--- -NHRDSRLTI FEQENFLGKK GELSDDYPSL QAMGWDGNEV 151 200 ENSP00000346805/1-196 GSFHVHSGAW VCSQFPGYRG FQYVLECDHH SGDYKHFREW GSHAPTFQVQ BACU008835/1-359 GSFHVHSGAW VGSQFPGYRG FQYVLECDHH SGDYKHFREW GSHAQTFQME ENSTTRP00000008944/1-196 GSFHVNSGAW VGSQFPGYRG FQYVLECDHH SGDYKHFREW GSHAQTFQVQ ENSBTAP00000025674/1-196 GSFHVHSGAW VCSQFPGYRG FQYVLECDHH SGDYKHFREW GSHAQTFQVQ bmy_07986T0/1-179 GSFHVHSGAW VGSQFPGYRG FQYVLECDHH SGDYKHFREW GSHAQTFQVQ 201 250 ENSP00000346805/1-196 ---------- ---------- SIRRIQQ--- ---------- ---------- BACU008835/1-359 ASPCPPMWYQ THSRGHQDPK SIKGVTKKAG SQSPLEVLKV AEPELQFSGM ENSTTRP00000008944/1-196 ---------- ---------- SIRRIQQ--- ---------- ---------- ENSBTAP00000025674/1-196 ---------- ---------- SIRRIQQ--- ---------- ---------- bmy_07986T0/1-179 ---------- ---------- SIRRIQQ--- ---------- ---------- 251 300 ENSP00000346805/1-196 ---------- ---------- ---------- ---------- ---------- BACU008835/1-359 SPPERSGQDK KFPVAPFPVL SSHQGIEESG AKAIEMGISV EGALVLEIRV ENSTTRP00000008944/1-196 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025674/1-196 ---------- ---------- ---------- ---------- ---------- bmy_07986T0/1-179 ---------- ---------- ---------- ---------- ---------- 301 350 ENSP00000346805/1-196 ---------- ---------- ---------- ---------- ---------- BACU008835/1-359 WVAAVSPGTV VRDTAAQPEL QPTSSRLADE AALGCCSDPD PSTRDFLLQQ ENSTTRP00000008944/1-196 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025674/1-196 ---------- ---------- ---------- ---------- ---------- bmy_07986T0/1-179 ---------- ---------- ---------- ---------- ---------- 351 400 ENSP00000346805/1-196 --------- BACU008835/1-359 TMLQIKDPK ENSTTRP00000008944/1-196 --------- ENSBTAP00000025674/1-196 --------- bmy_07986T0/1-179 ---------