KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:27:02 2014 Check: 00 .. Name: ENSP00000263246/1-486 Len: 493 Check: 6096 Weight: 1.00 Name: ENSBTAP00000025683/1-486 Len: 493 Check: 8073 Weight: 1.00 Name: ENSTTRP00000014482/1-467 Len: 493 Check: 7483 Weight: 1.00 Name: bmy_01040T0/1-487 Len: 493 Check: 9086 Weight: 1.00 Name: BACU013441/1-445 Len: 493 Check: 7261 Weight: 1.00 // 1 50 ENSP00000263246/1-486 MSVTYDD--- ----SVGVEV SSDSFWEVGN YKRTVKRIDD GHRLCSDLMN ENSBTAP00000025683/1-486 MSVTYDD--- ----SVGVEV SSDSFWEVGN YKRTVRRIDD GHRLCTDLMN ENSTTRP00000014482/1-467 MSVTYDD--- ----SVGVEV SSDSFWEVGN YKRTVKRIED GHRLCSDLMN bmy_01040T0/1-487 MDAGRMDIEK LRITVLRVSA SDKNGELVGN YKRTVKRIED GHRLCSDLMN BACU013441/1-445 ---------- ---------- ---------- ---------- --------MN 51 100 ENSP00000263246/1-486 CLHERARIEK AYAQQLTEWA RRWRQLVEKG PQYGTVEKAW MAFMSEAERV ENSBTAP00000025683/1-486 CLHERARIEK AYAQQLTEWA RRWRQLVDKG PQYGTVEKAW VAVMTEAEKV ENSTTRP00000014482/1-467 CLHERARIEK AYAQQLTEWA RRWRQLVDKG PQYGTVEKAW VAVMSEAEKV bmy_01040T0/1-487 CLHERARIEK AYAQQLTEWA RRWRQL---- --YGTVEKAW VAVMSEAEKV BACU013441/1-445 CLHERARIEK AYAQQLTEWA RRWRQLVDKG PQYGTVEKAW VAVMSEAEKV 101 150 ENSP00000263246/1-486 SELHLEVKAS LMNDDFEKIK NWQKEAFHKQ MMGGFKETKE AEDGFRKAQK ENSBTAP00000025683/1-486 SELHLEVKAS LMNEDFEKIK NWQKDAFHKQ MMGGFKETKE AEDGFRKAQK ENSTTRP00000014482/1-467 SELHLEVKAS LMNEDFEKIK NWQKEAFHKQ MMGGFKETKE AEDGFRKAQK bmy_01040T0/1-487 SELHLEVKAS LMNEDFEKIK NWQKEAFHKQ MMGGFKETKE AEDGFRKAQK BACU013441/1-445 SELHLEVKAS LMNEDFEKIK NWQKEAFHKQ MMGGFKETKE AEDGFRKAQK 151 200 ENSP00000263246/1-486 PWAKKLKEVE AAKKAHHAAC KEEKLAISRE ANSKADPSLN PEQLKKLQDK ENSBTAP00000025683/1-486 PWAKKLKEVE AAKKAYHAAC KEEKLAISRE NNSRADPSLN PEQLKKLQDR ENSTTRP00000014482/1-467 PWAKKLKEVE AAKKAYHAAC KEEKLAISRE TNSKADPSLN PEQLKKLQDK bmy_01040T0/1-487 PWAKKLKEVE AAKKAYHTAC KEEKLAISRE TNSKADPSLN PEQLKKLQDK BACU013441/1-445 PWAKKLKEVE AAKKAYHAAC KEEKLAISRE TNSKADPSLN PEQLKKLQDK 201 250 ENSP00000263246/1-486 IEKCKQDVLK TKEKYEKSLK ELDQGTPQYM ENMEQVFEQC QQFEEKRLRF ENSBTAP00000025683/1-486 VEKCKQDVLK SKEKYEKSLK ELGQSTPQYM ESMEQVFEQC QQFEEKRLRF ENSTTRP00000014482/1-467 VEKCKQDVLK TKEKYEKSLK ELGQGTPQYM EGMEQVFEQC QQFEEKRLRF bmy_01040T0/1-487 VEKSKQDVLK TKEKYEKSLK ELGQGTPQYM EGMEQVFEQC QQFEEKRLRF BACU013441/1-445 VEKSKQDVLK TKEKYEKSLK ELGQGTPQYM EGMEQVFEQC QQFEEKRLRF 251 300 ENSP00000263246/1-486 FREVLLEVQK HLDLSNVAGY KAIYHDLEQS IRAADAVEDL RWFRANHGPG ENSBTAP00000025683/1-486 FREVLLEVQK HLDLSNMASY KNVYRDLEQS IKAADAVEDL RWFRANHGPG ENSTTRP00000014482/1-467 FREVLLEVQK HLDLSNVASY KNIYRDLEQS IKVADAVEDL RWFRANHGPG bmy_01040T0/1-487 FREVLLEVQK HLDLSNVASY KNIYRDLEQN IKAADAVEDL RWFRANHGPG BACU013441/1-445 FREVLLEVQK HLDLSNVASY KNIYRDLEQS IKAADAVEDL RWFRANHGPG 301 350 ENSP00000263246/1-486 MAMNWPQFEE WSADLNRTLS RREKKKATDG VTLTGINQTG DQSLPSKPSS ENSBTAP00000025683/1-486 MSMNWPQFEE WSVDLNRTLS RKEKKKNADG VTLMGINQTG DQASQNKPSS ENSTTRP00000014482/1-467 MSMNWPQFEE WSADLNRTLS RREKKKTADG VTLTGINQTG DQALQNKPSS bmy_01040T0/1-487 MSMNWPQFED WSADLNRTLS RREKKKTADG VTLTGINQTG DQALQSKPSS BACU013441/1-445 MSMNWPQFEE WSADLNRTLS RREKKKTADG VTLTGINQTG DQALQSKPSS 351 400 ENSP00000263246/1-486 TLNVPSNPAQ SAQSQSSYNP FEDEDDTGST VSEKDDTKAK NVSSYEKTQS ENSBTAP00000025683/1-486 DLSVPGNPER SAQSLSSYNP FEDEDDTGST VSEKEDIKAK NVSSYEKTQS ENSTTRP00000014482/1-467 DFSVPSNSAR SAQSLSSYNP FEDEDDTGST VSEKEDIKAK NVSSYEKTQS bmy_01040T0/1-487 DLSVPSHPAR SAHSLSSYNP FEDEDDTGST VSEKEDIKAK NVSSYEKTQS BACU013441/1-445 DLSVPSNPAR SAHSLSSYNP FEDEDDTGST VSEKEDIKAK NVSSYEKTQS 401 450 ENSP00000263246/1-486 YPTDWSDDES NNPFSSTDAN GDSNPFDDDA TSGTEVRVRA LYDYEGQEHD ENSBTAP00000025683/1-486 YPADWSDDES NNPFSSTDAN GDSNPFDEDT PSGTEVRVRA LYDYEGQEHD ENSTTRP00000014482/1-467 YPTDWSDDES NNPFSSTDAN GDSNPFDEDT PSGTEVRVRA LYDYEGQEHD bmy_01040T0/1-487 YPTDWSDDES NNPFSSTDAN GDSNPFDEDT PSGTEVRVRA LYDYEGQEHD BACU013441/1-445 YPTDWSDDES NNPFSSTDAN GDSNPFDEDT PSGTEVRVRA LYDYEGQEHD 451 500 ENSP00000263246/1-486 ELSFKAGDEL TKMEDEDEQG WCKGRLDNGQ VGLYPANYVE AIQ ENSBTAP00000025683/1-486 ELSFKAGDEL TKIEDEDEQG WCKGRLDSGQ VGLYPANYVE AIQ ENSTTRP00000014482/1-467 ELSFKAGDEL TKIEDEDEQG WCKG------ ---------- --- bmy_01040T0/1-487 ELSFKAGDEL TKIEDEDEQG WCKGRLDNGQ VGLYPANYVE AIQ BACU013441/1-445 ELSFKTGDEL TKIEDEDEQG WCKGRLDSGQ VGLYPANYVE AIQ