KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:27:03 2014 Check: 00 .. Name: ENSP00000296585/1-1181 Len: 1182 Check: 97 Weight: 1.00 Name: ENSBTAP00000025685/1-1179 Len: 1182 Check: 9135 Weight: 1.00 Name: bmy_21792T0/1-750 Len: 1182 Check: 8103 Weight: 1.00 Name: BACU018370/1-1158 Len: 1182 Check: 9199 Weight: 1.00 Name: ENSTTRP00000000420/1-1178 Len: 1182 Check: 361 Weight: 1.00 // 1 50 ENSP00000296585/1-1181 MGPERTGAAP LPLLLVLALS QGILNCCLAY NVGLPEAKIF SGPSSEQFGY ENSBTAP00000025685/1-1179 MRPGRTGGTP LQLVLV--FS QGILNCCVAY NVGLPKAKIF SGPSSEQFGY bmy_21792T0/1-750 ---------- ---------- ---------- ---------- ---------- BACU018370/1-1158 ---------- ---------- -GILNCCVAY NVGLPEAKIF SGPSSEQFGY ENSTTRP00000000420/1-1178 MRPGRTGGTL LRLVLV--LN QGILNCCVAY NVGLPEAKIF SGPSSEQFGY 51 100 ENSP00000296585/1-1181 AVQQFINPKG NWLLVGSPWS GFPENRMGDV YKCPVDLSTA TCEKLNLQTS ENSBTAP00000025685/1-1179 AVQQFINPKG NWLLVGSPWS GFPKNRMGDV YKCPVDLSTT TCEKLNLQTS bmy_21792T0/1-750 ---------- ---------- ---------- ---------- ---------- BACU018370/1-1158 AVQQFINPEG NWLLVGSPWS GFPENRMGDV YKCPVDLSTT TCEKLNLQTS ENSTTRP00000000420/1-1178 AVQQFINPEG NWLLVGSPWS GFPENRMGDV YKCPVDLSTT TCEKLNLQTS 101 150 ENSP00000296585/1-1181 TSIPNVTEMK TNMSLGLILT RNMGTGGFLT CGPLWAQQCG NQYYTTGVCS ENSBTAP00000025685/1-1179 TSMSNVTEMK TNMSLGLTLT RNVGTGGFLT CGPLWAQQCG SQYYTTGVCS bmy_21792T0/1-750 ---------- ---------- ---------T CGPLWAQQCG RQFYTTGLCS BACU018370/1-1158 TSISNVTEMK TNMSLGLTLT RNVGTGGFLT CGPLWAQQCG SQFYTTGLCS ENSTTRP00000000420/1-1178 TSISNVTEMK TNMSLGLTLT RNVGTGGFLT CGPLWAQQCG NQFYTTGLCS 151 200 ENSP00000296585/1-1181 DISPDFQLSA SFSPATQPCP SLIDVVVVCD ESNSIYPWDA VKNFLEKFVQ ENSBTAP00000025685/1-1179 DVSPDFQLRT SFAPAVQTCP SFIDVVVVCD ESNSIYPWDA VKNFLEKFVQ bmy_21792T0/1-750 DVSPNFQLLT SFSPAVQK-- SLI------- -------WFS V--------- BACU018370/1-1158 DVSPNFQLLT SFSPAVQTCP SLIDVVVVCD ESNSIYPWDA VKNFLEKFVQ ENSTTRP00000000420/1-1178 DVSPNFQLLT SFSPAVQTCP SLIDVVVVCD ESNSIYPWDA VKNFLEKFVQ 201 250 ENSP00000296585/1-1181 GLDIGPTKTQ VGLIQYANNP RVVFNLNTYK TKEEMIVATS QTSQYGGDLT ENSBTAP00000025685/1-1179 GLDIGPTKTQ MGLIQYANNP RVVFNLNTFK SKDEMIKATS QTFQYGGDLT bmy_21792T0/1-750 ---------- ---------- ---------- ---------- ---------- BACU018370/1-1158 GLDIGPTKTQ VGLIQYANYP RVVFNLNTFK TKDGMIKATS QTSQYGGDLT ENSTTRP00000000420/1-1178 GLDIGPTKTQ VGLIQYANYP RVVFNLNTFK TKDEMIKATS QTSQYGGDLT 251 300 ENSP00000296585/1-1181 NTFGAIQYAR KYAYSAASGG RRSATKVMVV VTDGESHDGS MLKAVIDQCN ENSBTAP00000025685/1-1179 NTFKAIQYAR DTAYSTAAGG RPGATKVMVV VTDGESHDGS KLKAVIDQCN bmy_21792T0/1-750 -------FLR DSAYSAAAGG RPGATKVMVV VTDGESHDGS MLKAVIDQCN BACU018370/1-1158 NTFKAIQYAR DSAYSAAAGG RPGATKVMVV VTDGESHDGS MLKAVIDQCN ENSTTRP00000000420/1-1178 NTFKAIQYAR DSAYSAAAGG RPGATKVMVV VTDGESHDGS MLKAVIDQCN 301 350 ENSP00000296585/1-1181 HDNILRFGIA VLGYLNRNAL DTKNLIKEIK AIASIPTERY FFNVSDEAAL ENSBTAP00000025685/1-1179 KDNILRFGIA VLGYLNRNAL DTKNLIKEIK AIASIPTERH FFNVSDEADL bmy_21792T0/1-750 NDNILRFGIA VLGYLNRNAL DTKNLIKEIK AIAS------ ---------- BACU018370/1-1158 NDNILRFGIA VLGYLNRNAL DTKNLIKEIK AIASIPTERY FFNVSDEAAL ENSTTRP00000000420/1-1178 NDNILRFGIA VLGYLNRNAL DTKNLIKEIK AIASIPTERY FFNVSDEAAL 351 400 ENSP00000296585/1-1181 LEKAGTLGEQ IFSIEGTVQG GDNFQMEMSQ VGFSADYSSQ NDILMLGAVG ENSBTAP00000025685/1-1179 LEKAGTIGEQ IFSIEGTVQG GDNFQMEMSQ VGFSAEYSPQ NNILMLGAVG bmy_21792T0/1-750 ---------- ------TVQG GDNFQMEMSQ VGFSADYSPQ NDILMLGAVG BACU018370/1-1158 LEKAGTLGEQ IFSIEGTVQG GDNFQMEMSQ VGFSADYSPQ NDILMLGAVG ENSTTRP00000000420/1-1178 LEKAGTLGEQ IFSIEGTVQG GDNFQMEMSQ VGFSADYSPQ NDILMLGAVG 401 450 ENSP00000296585/1-1181 AFGWSGTIVQ KTSHGHLIFP KQAFDQILQD RNHSSYLGYS VAAISTGEST ENSBTAP00000025685/1-1179 AYDWSGTVVQ KTPHGHLIFS KQAFEQILQD RNHSSYLGYS VASISTGNSV bmy_21792T0/1-750 AYDWSGTVVQ QTPHGHLIFP KQAFDQILQD RNHSSYLGYS VASISTGKSV BACU018370/1-1158 AYDWSGTVVQ QTPHGHLIFP KQAFDQILQD RNHSSYLGYS VASISTGKSV ENSTTRP00000000420/1-1178 AYDWSGTVVQ QTPHGHLIFP KQAFDQILQD RNHSSYLGYS VASISTGKSV 451 500 ENSP00000296585/1-1181 HFVAGAPRAN YTGQIVLYSV NENGNITVIQ AHRGDQIGSY FGSVLCSVDV ENSBTAP00000025685/1-1179 HFVAGAPRAN YTGQIVLYSV NENGNVTVIQ SHRGDQIGSY FGSVLCAVDV bmy_21792T0/1-750 HFVAGAPRAN YTGQIVLYSV NESGNITVIQ SHR------- -------VDV BACU018370/1-1158 HFVAGAPRAN YTGQIVLYNV NESGNITVIQ SHRGDQIGSY FGSVLCAVDV ENSTTRP00000000420/1-1178 HFVAGAPRAN YTGQIVLYSV NESGNITVIQ SHRGDQIGSY FGSVLCAVDV 501 550 ENSP00000296585/1-1181 DKDTITDVLL VGAPMYMSDL KKEEGRVYLF TIKEGILGQH QFLEGPEGIE ENSBTAP00000025685/1-1179 NKDTITDVLL VGAPMYMNDL KKEEGRVYLF TITKGILNWH QFLEGPKGLE bmy_21792T0/1-750 DKDTVTDVLL VGAPTYMNDL KKEEGRVYLF TITK------ ---------- BACU018370/1-1158 DKDTITDVLL VGAPMYMNDL KKEEGRVYLF TITKGVLNWH QFLEGPEGVE ENSTTRP00000000420/1-1178 DKDTITDVLL VGAPMYMNDL KKEEGRVYLF TITKGVLNWH QFLEGPEGVE 551 600 ENSP00000296585/1-1181 NTRFGSAIAA LSDINMDGFN DVIVGSPLEN QNSGAVYIYN GHQGTIRTKY ENSBTAP00000025685/1-1179 NARFGSAIAA LSDINMDGFN DVIVGSPLEN QNSGAVYIYN GHEGMIRLRY bmy_21792T0/1-750 ---------- ---------- ---------- ---------- ---------- BACU018370/1-1158 NARFGSAIAA LSDINMDGFN DVIVGSPLEN QNSGAVYIYN GHEDTIRLRY ENSTTRP00000000420/1-1178 NARFGSAIAA LSDINMDGFN DVIVGSPLEN QNSGAVYIYN GREGTIRLRY 601 650 ENSP00000296585/1-1181 SQKILGSDGA FRSHLQYFGR SLDGYGDLNG DSITDVSIGA FGQVVQLWSQ ENSBTAP00000025685/1-1179 SQKILGSDRA FSSHLQYFGR SLDGYGDLNG DSITDVSVGA FGQVVQLWSQ bmy_21792T0/1-750 --KILGSDGA FRSHLQYFGR SLDGYGDLNG DSITDVSVGA FGQ------- BACU018370/1-1158 SQKILGSDGA FRSHLQYFGR SLDGYGDLNG DSITDVSVGA FGQVILLWSQ ENSTTRP00000000420/1-1178 SQKILGSDGA FRSHLQYFGR SLDGYGDLNG DSITDVSVGA FGQVIQLWSQ 651 700 ENSP00000296585/1-1181 SIADVAIEAS FTPEKITLVN KNAQIILKLC FSAKFRPTKQ NNQVAIVYNI ENSBTAP00000025685/1-1179 SIADVSVDAS FTPKKITLLN KNAEIKLKLC FSAKFRPTNQ NNQVAIVYNI bmy_21792T0/1-750 ---------- ---------- -NAEINLKLC FSAKFRPAKQ NNQVAIVYNI BACU018370/1-1158 SIADVSVVAS FTPEKITLLN KNAEINLKLC FSAKFRPAKQ NNQVAIVYNI ENSTTRP00000000420/1-1178 SIADVSVVAS FTPEKITLLN KNAEINLKLC FSAKFRPAKQ NNQVAIVYNI 701 750 ENSP00000296585/1-1181 TLDADGFSSR VTSRGLFKEN NERCLQKNMV VNQAQSCPEH IIYIQEPSDV ENSBTAP00000025685/1-1179 TIDEDQFSSR VISRGLFKEN NERCLQKTMI VSQAQRCSEY IIHIQEPSDI bmy_21792T0/1-750 TIDADQYSSR VTSRGLFKEN NERCLRKTTI VNQAQSCSEY LIHIQEPSDV BACU018370/1-1158 TIDADQYSSR VTSRGLFKEN NERCLQKTTI VNQAQSCSEY IIHIQEPSDV ENSTTRP00000000420/1-1178 TIDADQ--SR VTSRGLFKEN NERCLQKTMI VNQAQSCSEY VIHIQEPSDV 751 800 ENSP00000296585/1-1181 VNSLDLRVDI SLENPGTSPA LEAYSETAKV FSIPFHKDCG EDGLCISDLV ENSBTAP00000025685/1-1179 ISPLNLCMNI SLENPGTNPA LEAYSETVKV FSIPFHKDCG DDGVCISDLV bmy_21792T0/1-750 VSSLDLCVNI SLENPGTNPA LEAYSETVKV FSTT------ ---------A BACU018370/1-1158 VSSLDLCVNI SLENPGTNPA LEAYSETVKV FSIPFYKDCG DDGVCISDLV ENSTTRP00000000420/1-1178 VSSLDLCVNI SLENPGTNPA LEAYSETVKV FSIPFYKDCG DDGVCISDLV 801 850 ENSP00000296585/1-1181 LDVRQIPAAQ EQPFIVSNQN KRLTFSVTLK NKRESAYNTG IVVDFSENLF ENSBTAP00000025685/1-1179 LNVQQLPATQ QQPFIVSNQN KRLTFSVQLK NKKESAYNTE IVVDFSENLF bmy_21792T0/1-750 LHCQQ----- ---------- ---------P KQKESAYNSG IVVDFSENLF BACU018370/1-1158 LHVQQLPAAQ QQPFIVSNQN KRLTFSVTLK NKKESAYNSG IVVDFSENLF ENSTTRP00000000420/1-1178 LDVQQLPAAQ QQPFIVSNQN KRLTFSVTLK NKKESAYNSG IVVDFSENLF 851 900 ENSP00000296585/1-1181 FASFSLPVDG TEVTCQVAAS QKSVACDVGY PALKREQQVT FTINFDFNLQ ENSBTAP00000025685/1-1179 FASWSMPVDG TEVTCQIASS QKSVTCNVGY PALKSKQQVT FTINFDFNLQ bmy_21792T0/1-750 FASWSMPVDG TEVTCQIASS QKSVTCNVGY PALKREQQVT FTINFDFNLQ BACU018370/1-1158 FASWSMPVDG TEVTCQIASS QKSVTCNVGY PALKREQQVT FTINFDFNLQ ENSTTRP00000000420/1-1178 FASWSMPVDG TEVTCQIASS QKSVTCNVGY PALKREQQVT FTINFDFNLQ 901 950 ENSP00000296585/1-1181 NLQNQASLSF QALSESQEEN KADNLVNLKI PLLYDAEIHL TRSTNINFYE ENSBTAP00000025685/1-1179 NLQNQASISF RALSESQEEN MADNSVNLKL SLLYDAEIHI TRSTNINFYE bmy_21792T0/1-750 NLQNQASVSF QALSESYEEN KADNSVDFKL SLLYDAEIHI TRSTNINFYE BACU018370/1-1158 NLQNQASVSF QALSESYEEN KADNSVNFKL SLLYDAEIHI TRSTNINFYE ENSTTRP00000000420/1-1178 NLQNQASVSF QALSESYEEN KADNSVNFKL SLLYDAEIHI TRSTNINFYE 951 1000 ENSP00000296585/1-1181 ISSDGNVPSI VHSFEDVGPK FIFSLKVTTG SVPVSMATVI IHIPQYTKEK ENSBTAP00000025685/1-1179 VSLDGNVSSV VHSFEDIGPK FIFSIKVTTG SVPVSMASVI IHIPQYTKDK bmy_21792T0/1-750 VSSDGNIPSI VNNFEDIGPK FIFSIKVTTG SVPVSMASVI IHIPQYTKGN BACU018370/1-1158 VSSDGNIPSI VNNFEDIGPK FIFSVKV--G SVPVSMASVI IHIPQYTKGK ENSTTRP00000000420/1-1178 VSSDGNIPSI VNSFEDIGPK FIFFIKVTTG SVPVSMASVI IRIPQYTRGK 1001 1050 ENSP00000296585/1-1181 NPLMYLTGVQ TDKAGDISCN ADINPLKIGQ TSSSVSFKSE NFRHTKELNC ENSBTAP00000025685/1-1179 NPLMYLTGVH TDQAGDISCE AEINPLKIGQ TSSSVSFKSE NFRHIKELNC bmy_21792T0/1-750 NPLMYLTGVH TDQAGDISCK AEINPLKTGQ TSSSVSFKSE NFRHVKELNC BACU018370/1-1158 NPLMYLTGVH TDQAGDISCK AEINPLKIGQ TSSSVSFKSE NFRHVKELNC ENSTTRP00000000420/1-1178 NPLMYLTGVH TDQAGDISCK AEINPLKIGQ TSSSVSFKSE NFRHVKELNC 1051 1100 ENSP00000296585/1-1181 RTASCSNVTC WLKDVHMKGE YFVNVTT-RI WNGTFASSTF QTVQLTAAAE ENSBTAP00000025685/1-1179 RTASCSNIMC WLRDLQVKGE YFLNVST-RI WNGTFAASTF QTVQLTAAAE bmy_21792T0/1-750 RTASCSNVTC WLKDLQVKGE YFLNVST-RI WNGTFAVSTF QTVQLTAAAE BACU018370/1-1158 RTASCSNVTC WLKDLQVKGE YFLNVST-RI WNGTFAVSAF QTVQLTAAAE ENSTTRP00000000420/1-1178 RTASCSNITC WLKDLQVKGE YFLNVSTSXX XXXXXXXSTF QTVQLTAAAE 1101 1150 ENSP00000296585/1-1181 INTYNPEIYV IEDNTVTIPL MIMKPDEKAE VPTGVIIGSI IAGILLLLAL ENSBTAP00000025685/1-1179 IDTYNPQIYV IEENTVTIPL TIMKPHEKVE VPTGVIVGSV IAGILLLLAL bmy_21792T0/1-750 IDTYNPQIYA IEENTVT--- ---------- ---------- ---------- BACU018370/1-1158 IDTYNPQIYA IEENTITIPI TIMKPHEKAE VPTGVIVGSA IAGILLLLAL ENSTTRP00000000420/1-1178 IDTYNPQIYA IEENTVTIPI TIMKPHEKAE VPTGVIVGSA IAGILLLLAL 1151 1200 ENSP00000296585/1-1181 VAILWKLGFF KRKYEKMTKN PDEIDETTEL SS ENSBTAP00000025685/1-1179 VAILWKLGFF KRKYEKMAKN PDETDETTEL NS bmy_21792T0/1-750 ------LGFF KRKYEKMAKS PDEIDETTEL NS BACU018370/1-1158 VAILWKLGFF KRKYEKMAKN PDEIDETTEL NS ENSTTRP00000000420/1-1178 VAVLWKLGFF KRKYEKMTKN PDEIDETTEL NS