KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:27:05 2014 Check: 00 .. Name: ENSTTRP00000007844/1-352 Len: 471 Check: 642 Weight: 1.00 Name: ENSP00000313432/1-328 Len: 471 Check: 8926 Weight: 1.00 Name: ENSBTAP00000025697/1-328 Len: 471 Check: 9736 Weight: 1.00 Name: bmy_02847T0/1-212 Len: 471 Check: 9688 Weight: 1.00 Name: BACU017543/1-373 Len: 471 Check: 786 Weight: 1.00 // 1 50 ENSTTRP00000007844/1-352 -------MRP VRLMKVFVTR RIPTEGSAAL ARA------- ---------- ENSP00000313432/1-328 -------MRP VRLMKVFVTR RIPAEGRVAL ARA------- ---------- ENSBTAP00000025697/1-328 -------MRP VRLMKVFITR RIPPEGSAAL ARA------- ---------- bmy_02847T0/1-212 ---------- ---------- ---------- ---------- ---------- BACU017543/1-373 MKKTEDNNTP VFIVDVKANK HQIKQAVKKL CDTDVTKVNT LTRPDGEKKA 51 100 ENSTTRP00000007844/1-352 ---------- ---------- -ADCEVEQWD SDEPIPSKDL ERGVAGAHGL ENSP00000313432/1-328 ---------- ---------- -ADCEVEQWD SDEPIPAKEL ERGVAGAHGL ENSBTAP00000025697/1-328 ---------- ---------- -ADCEVEQWD SDEPIPREDL EQRMAGAQGL bmy_02847T0/1-212 ---------- ---------- ---------- -MEPCPPP-- ---------- BACU017543/1-373 YVRLVPDYDA LDVANKIGIV KTDCEVEQWD SDEPIPSKDL ERGMAGAHGL 101 150 ENSTTRP00000007844/1-352 LCLLSDRIDK KLLDAAGANL KVISTMSVGV DHLALDEIKK RGIRVGYTPD ENSP00000313432/1-328 LCLLSDHVDK RILDAAGANL KVISTMSVGI DHLALDEIKK RGIRVGYTPD ENSBTAP00000025697/1-328 LCLLSDRIDK KLLDAAGANL KVISTMSVGV DHLALDEIKK RGIRVGYTPG bmy_02847T0/1-212 ---------- ---------- ---------- ---------- ---------- BACU017543/1-373 LCLLSDRIDK KLLDAAGANL KVISTMSVGV DHLALDEIKK RGIRVGYTPD 151 200 ENSTTRP00000007844/1-352 VLTDATAELA VSLLLTTCRR LPEAIEEVKX XXXXXXXXXX XXXXXXXXXX ENSP00000313432/1-328 VLTDTTAELA VSLLLTTCRR LPEAIEEVKN GGWTSWKPLW LCGYGLTQST ENSBTAP00000025697/1-328 VLTDATAELA VSLLLTTCRR LPEAIEEVKN GGWTSWKPLW MCGHGLSQST bmy_02847T0/1-212 ---------- ---------- ---------- ---------- ---------- BACU017543/1-373 VLTDATAELA VSLLLTTCRR LPEAIEEVKN GGWTSWKPLW MCGYGLTQST 201 250 ENSTTRP00000007844/1-352 XXXXXXXXXX QAIARCLKPF GVQRLLYTGR QPRPQEAEEF QAEFVSTQQL ENSP00000313432/1-328 VGIIGLGRIG QAIARRLKPF GVQRFLYTGR QPRPEEAAEF QAEFVSTPEL ENSBTAP00000025697/1-328 VGIVGLGRIG QAIARRLKPF GVRRFLYTGR QPRPQEAAEF QAEFVSTPKL bmy_02847T0/1-212 ---------- ---------- ---------- ---------- ----VSTHQL BACU017543/1-373 VGIIGLGRIG QAIARCLKPF GVQRLLYTGR QPRPQEAEEF QAEFVSTHQL 251 300 ENSTTRP00000007844/1-352 AAESDFIVVA CSLTPATRGL CNKDFFQQMK KTAVFVNISR ---------- ENSP00000313432/1-328 AAQSDFIVVA CSLTPATEGL CNKDFFQKMK ETAVFINIS- ---------- ENSBTAP00000025697/1-328 AAESDFIVVA CSLTPATRGL CNKDFFQWMK KTAVFVNIS- ---------- bmy_02847T0/1-212 AAESDFIVVA CSLTPATRGL CNKDFFQQMK KTAVFVNISS ETQAELTALH BACU017543/1-373 AAESDFIIVA CSLTPATRGL CNKDFFQQMK KTAVFVNIS- ---------- 301 350 ENSTTRP00000007844/1-352 ---------- ---------- ---------- ---------- ---------- ENSP00000313432/1-328 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025697/1-328 ---------- ---------- ---------- ---------- ---------- bmy_02847T0/1-212 KPINQTTQKY SKGPGTSQVL RAGPGLSGSQ QYPWPCSGSE GTVAASYQAT BACU017543/1-373 ---------- ---------- ---------- ---------- ---------- 351 400 ENSTTRP00000007844/1-352 ---------- ----YPGSPG KPREGLSLLL PEVFLPHGLS VRQAELTALD ENSP00000313432/1-328 ---------- -----RGDVV NQDDLYQALA SGKIAAAGLD VTSPEPLPTN ENSBTAP00000025697/1-328 ---------- -----RGEVV DQDDLYQALA SGQIAAAGLD VTTPEPLPTN bmy_02847T0/1-212 WVEGALGHPH HTVILRGEVV DQDDLYQALA SGQIAAAGLD VTTPEPLPTN BACU017543/1-373 ---------- -----RGEVV DQDDLYQALA SGQIAAAGLD VTTPEPLPTN 401 450 ENSTTRP00000007844/1-352 KPINQLRNRP QSMSQCSEQA WPVWFPAVPG LAQSTVAAVT RLPLTQRGLN ENSP00000313432/1-328 HPLLTLKN-- -----C---- --VILPHIGS ATHRTRNTMS LLAANN---- ENSBTAP00000025697/1-328 HPLLTLKN-- -----C---- --VILPHIGS ATHRTRNIMS VLAADN---- bmy_02847T0/1-212 HPLLTLKN-- -----C---- --VILPHIGS ATHRTRNTMS LLAANN---- BACU017543/1-373 HPLLTLKN-- -----C---- --VILPHIGS ATHRTRNTMS LLAANN---- 451 500 ENSTTRP00000007844/1-352 VLYSPLEADL HGAEPGSVVN D ENSP00000313432/1-328 -----LLAGL RGEPMPSELK L ENSBTAP00000025697/1-328 -----LLAGL RGEPMPSELK L bmy_02847T0/1-212 -----LLAGL RGEPMPSELK L BACU017543/1-373 -----LLAGL RGEPMPSELK L