KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:27:05 2014 Check: 00 .. Name: ENSP00000312304/1-245 Len: 263 Check: 9920 Weight: 1.00 Name: ENSBTAP00000025698/1-245 Len: 263 Check: 5234 Weight: 1.00 Name: ENSTTRP00000006748/1-245 Len: 263 Check: 9293 Weight: 1.00 Name: bmy_08414T0/1-263 Len: 263 Check: 8499 Weight: 1.00 Name: BACU019276/1-245 Len: 263 Check: 9032 Weight: 1.00 // 1 50 ENSP00000312304/1-245 MDGTRTSLDI EEYSDTEVQK NQVLTLEEWQ DKWVNGKTAF HQEQGHQLLK ENSBTAP00000025698/1-245 MGDSRALLDS EEYPNTEAQK DRVLTLEEWQ EKWVNHKTGF HQEQGHQLLK ENSTTRP00000006748/1-245 MANTRAVLDA EEYPNTEVQK NRVLTLEEWQ EKWVNHKIAF HQERGHQLLK bmy_08414T0/1-263 MANTRTVLDV EEYPDTEVQK NRVLTLEEWQ EKWVNHKIAF HQERGHQLLK BACU019276/1-245 MANTRTVLDV EEYPDTEVQK NRVLALEEWQ EKWVNHKIAF HQERGHQLLK 51 100 ENSP00000312304/1-245 KHLDTFLKGK SGLRVFFPLC GKAVEMKW-- ---------- ------FADR ENSBTAP00000025698/1-245 KYLDTFLKGE KALRVFFPLC GKAVEMKW-- ---------- ------FADR ENSTTRP00000006748/1-245 KHLDTFLKGA KELRVFFPLC GKAVEMKW-- ---------- ------FADR bmy_08414T0/1-263 KHLDTFLKGE KQLRVFFPLC GKAVEMKWYE RISINVLSCL DDKHFGFADR BACU019276/1-245 KHLDTFLKGE KQLRVFFPLC GKAVEMKW-- ---------- ------FADR 101 150 ENSP00000312304/1-245 GHSVVGVEIS ELGIQEFFTE QNLSYSEEPI TEIPGTKVFK SSSGNISLYC ENSBTAP00000025698/1-245 GHSVVGVEIS ELGIRDFFTE QNLSYSEEPI MEIPGAKIFK SSSGNISLYC ENSTTRP00000006748/1-245 GHSVVGVEIS ELGIREFFTE QNLSYSEEQI MEIPGAKVFK SSSGNISLYC bmy_08414T0/1-263 GHSVVGVEIS ELGIREFFTE QNLSYSEEQI MEIPGAKVFK SSSGNISLYC BACU019276/1-245 GHSVVGVEIS ELGIREFFTE QNLSYSEEQI MEIPGAKVFK SSSGNISLYC 151 200 ENSP00000312304/1-245 CSIFDLPRTN IGKFDMIWDR GALVAINPGD RKCYADTMFS LLGKKFQYLL ENSBTAP00000025698/1-245 CNLFDLPRAN IGKFDRIWDR GALVAVNPSD RKRYSDVMLS LTRPGFRYLL ENSTTRP00000006748/1-245 CSLFDLPRAN IGKFDRIWDR GALVAINPGD RKRYADIMLS LTRTGFQYLL bmy_08414T0/1-263 CSLFDLPRAN IGKFDRIWDR GALVAVNPGD RKRYADIMLS LTRTGFQYLL BACU019276/1-245 CSLFDLPRAN IGKFDRIWDR GALVAINPGD RKRYADIMLS LTRTGFQYLL 201 250 ENSP00000312304/1-245 CVLSYDPTKH PGPPFYVPHA EIERLFGKIC NIRCLEKVDA FEERHKSWGI ENSBTAP00000025698/1-245 SVFSYDPTKH AGPPFYVTDG EVKKLFGSVC NIQCLEKVDV FEERHKSWGI ENSTTRP00000006748/1-245 SVFSYDPTKH AGPPFYVPDA EIRTLFGSVC NIHCLEKVDA FEEGHKSWGI bmy_08414T0/1-263 SVFSYDPTKH AGPPFYVPDA EIKTLFGSVC DIHCLEKVDA FEERHKSWGI BACU019276/1-245 SVFSYDPTKH AGPPFYVPDA EIKTLFGSVC DIHCLEKVDA FEERHKSWGI 251 300 ENSP00000312304/1-245 DCLFEKLYLL TEK ENSBTAP00000025698/1-245 DQIIERLYLF TEK ENSTTRP00000006748/1-245 DYIIEKLYLF IEK bmy_08414T0/1-263 DYLIEKLYLF IEK BACU019276/1-245 DYLIEKLYLF IEK