KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:27:06 2014 Check: 00 .. Name: ENSTTRP00000009555/1-527 Len: 549 Check: 8301 Weight: 1.00 Name: ENSBTAP00000025703/1-544 Len: 549 Check: 4258 Weight: 1.00 Name: ENSP00000384545/1-522 Len: 549 Check: 2566 Weight: 1.00 Name: bmy_22062T0/1-526 Len: 549 Check: 6558 Weight: 1.00 Name: BACU000650/1-543 Len: 549 Check: 1322 Weight: 1.00 // 1 50 ENSTTRP00000009555/1-527 ---------- -------MVD DKEKNMKCLT FFLMLPETVK NRSKKSSKKT ENSBTAP00000025703/1-544 CSHRLGISGY KERPTVLMVD DKERNMKCLT FFLMLPETVK NRSKKSSKKT ENSP00000384545/1-522 ---------- -------MVD DKEKNMKCLT FFLMLPETVK NRSKKSSKKA bmy_22062T0/1-526 ---------- -------MVD DKEKNMKCLT FFLMLPETVK NRSKKSSKKT BACU000650/1-543 CSHRFGISGY KERPTVLMVD DKEKNMKCLT FFLMLPETVK NRSKKSSKKT 51 100 ENSTTRP00000009555/1-527 NPSSSSSSSS SSSSSKLPPV CYEIITLKTK KKKKMAADIF PRKKPANSSS ENSBTAP00000025703/1-544 NPSSSSSS-S SNSSSKLPPV CYEIITLKTK KKKKMAADIF PRKKPASSSS ENSP00000384545/1-522 NTSS-----S SSNSSKLPPV CYEIITLKT- KKKKMAADIF PRKKPANSSS bmy_22062T0/1-526 NPSSSSS--S SSSSSKLPPV CYEIITLKTK KKKKMAADIF PRKKPANSSS BACU000650/1-543 NPSSSSS--S SSSSSKLPPV CYEIITLKTK KKKKMAADIF PRKKPANSSS 101 150 ENSTTRP00000009555/1-527 TTVQQYHQQN LSNNNLIPAP NWQGLYPTIR ERNAVMFNND LMADVHFVVG ENSBTAP00000025703/1-544 STVQQHHQQN LSNNNLIPAP NWQGLYPTIR ERNAVMFNND LMADVHFVVG ENSP00000384545/1-522 TSVQQYHQQN LSNNNLIPAP NWQGLYPTIR ERNAMMFNND LMADVHFVVG bmy_22062T0/1-526 TTVQQYHQQN LSNNNLIPAP NWQGLYPTIR ERNAVMFNND LMADVHFVVG BACU000650/1-543 TTVQQYHQQN LSNNNLIPAP NWQGLYPTIR ERNAVMFNND LMADVHFVVG 151 200 ENSTTRP00000009555/1-527 PPGGTQRLPG HKYVLAV-SS VXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000025703/1-544 PPGGTQRLPG HKYVLAVGSS VFHAMFYGEL AEDKDEIRIP DVDPAAFLAM ENSP00000384545/1-522 PPGGTQRLPG HKYVLAVGSS VFHAMFYGEL AEDKDEIRIP DVEPAAFLAM bmy_22062T0/1-526 PPGGTQRLPG HKYVLAVGSS VFHAMFYGEL AEDKDEIRIP DVDPAAFLAM BACU000650/1-543 PPGGTQRLPG HKYVLAVGSS VFHAMFYGEL AEDKDEIRIP DVDPAAFLAM 201 250 ENSTTRP00000009555/1-527 XXYIYCDEID LAADTVLATL YAAKKYIVPH -ARACVNFL- TSLSA--ACV ENSBTAP00000025703/1-544 LKYIYCDEID LAADTVLATL YAAKKYIVPH LARACVNFLE TSLSAKNACV ENSP00000384545/1-522 LKYIYCDEID LAADTVLATL YAAKKYIVPH LARACVNFLE TSLSAKNACV bmy_22062T0/1-526 LKYIYCDEID LAADTVLATL YAAKKYIVPH LARACVNFLE TSLSAKNACV BACU000650/1-543 LKYIYCDEID LAADTVLATL YAAKKYIVPH LARACVNFLE TSLSAKNACV 251 300 ENSTTRP00000009555/1-527 LLSQSCLFEE PXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXTLEIL ENSBTAP00000025703/1-544 LLSQSCLFEE PDLTQRCWEV IDAQAELALK SEGFCDIDFQ TLE----SIL ENSP00000384545/1-522 LLSQSCLFEE PDLTQRCWEV IDAQAELALK SEGFCDIDFQ TLE----SIL bmy_22062T0/1-526 LLSQSCLFEE PDLTQRCWEV IDAQAELALK SEGFCDIDFQ TLE----SIL BACU000650/1-543 LLSQSCLFEE PDLTQRCWEV IDAQAELALK SEGFCDIDFQ TLE----SIL 301 350 ENSTTRP00000009555/1-527 RRETLNAKEI VVFEAALNWA EVECQRQDLA LSIENKRKVL GKALYLIRIP ENSBTAP00000025703/1-544 RRETLNAKEI VVFEAALNWA EVECQRQDLA LSIENKRKVL GKALYLIRIP ENSP00000384545/1-522 RRETLNAKEI VVFEAALNWA EVECQRQDLA LSIENKRKVL GKALYLIRIP bmy_22062T0/1-526 RRETLNAKEI VVFEAALNWA EVECQRQDLA LSIENKRKVL GKALYLIRIP BACU000650/1-543 RRETLNAKEI VVFEAALNWA EVECQRQDLA LSIENKRKVL GKALYLIRIP 351 400 ENSTTRP00000009555/1-527 TMALDDFANG AAQSGVLTLN ETNDIFLWYT AAKKPELQFV SKARKGLVPQ ENSBTAP00000025703/1-544 TMALDDFANG AAQSGVLTLN ETNDIFLWYT AAKKPELQFV SKARKGLVPQ ENSP00000384545/1-522 TMALDDFANG AAQSGVLTLN ETNDIFLWYT AAKKPELQFV SKARKGLVPQ bmy_22062T0/1-526 TMALDDFANG AAQSGVLTLN ETNDIFLWYT AAKKPELQFV SKARKGLVPQ BACU000650/1-543 TMALDDFANG AAQSGVLTLN ETNDIFLWYT AAKKPELQFV SKARKGLVPQ 401 450 ENSTTRP00000009555/1-527 RCHRFQSCAY RSNQWRYRGR CDSIQFAVDK RVFIAGFGLY GSSCGSAEYS ENSBTAP00000025703/1-544 RCHRFQSCAY RSNQWRYRGR CDSIQFAVDK RVFIAGFGLY GSSCGSAEYS ENSP00000384545/1-522 RCHRFQSCAY RSNQWRYRGR CDSIQFAVDK RVFIAGFGLY GSSCGSAEYS bmy_22062T0/1-526 RCHRFQSCAY RSNQWRYRGR CDSIQFAVDK RVFIAGFGLY GSSCGSAEYS BACU000650/1-543 RCHRFQSCAY RSNQWRYRGR CDSIQFAVDK RVFIAGFGLY GSSCGSAEYS 451 500 ENSTTRP00000009555/1-527 AKIELKRQGV VLGQNLSKYF SDGSSNTFPV WFEYPVQIEP DTFYTASVIL ENSBTAP00000025703/1-544 AKIELKRQGV VLGQNLSKYF SDGSSSTFPV WFEYPVQIEP DTFYTASVIL ENSP00000384545/1-522 AKIELKRQGV VLGQNLSKYF SDGSSNTFPV WFEYPVQIEP DTFYTASVIL bmy_22062T0/1-526 AKIELKRQGV VLGQNLSKYF SDGSSNTFPV WFEYPVQIEP DTFYTASVIL BACU000650/1-543 AKIELKRQGV VLGQNLSKYF SDGSSNTFPV WFEYPVQIEP DTFYTASVIL 501 550 ENSTTRP00000009555/1-527 DGNELSYFGQ EGMTEVQCGK VTVQFQCSSD STNGTGVQGG QIPELIFYA ENSBTAP00000025703/1-544 DGNELSYFGQ EGMTEVQCGK VTVQFQCSSD STNGTGVQGG QIPELIFYA ENSP00000384545/1-522 DGNELSYFGQ EGMTEVQCGK VTVQFQCSSD STNGTGVQGG QIPELIFYA bmy_22062T0/1-526 DGNELSYFGQ EGMTEVQCGK VTVQFQCSSD STNGTGVQGG QIPELIFYA BACU000650/1-543 DGNELSYFGQ EGMTEVQCGK VTVQFQCSSD STNGTGVQGG QIPELIFYA