KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:27:10 2014 Check: 00 .. Name: ENSP00000466967/1-659 Len: 851 Check: 6227 Weight: 1.00 Name: ENSBTAP00000025736/1-662 Len: 851 Check: 6860 Weight: 1.00 Name: BACU003994/1-813 Len: 851 Check: 1870 Weight: 1.00 Name: bmy_04851T0/1-622 Len: 851 Check: 477 Weight: 1.00 Name: ENSTTRP00000006035/1-659 Len: 851 Check: 1503 Weight: 1.00 // 1 50 ENSP00000466967/1-659 --MQGSSLWL SLTFRSARVL SRARFFEWQS PGLPNTAAME NGTGPYGEER ENSBTAP00000025736/1-662 MSRARTVLWL SPTLRSVLSL YRARFMEGQP QGPPNSAAME NGTEPDGEER BACU003994/1-813 ---------- ---------- ---------- --------ME NGTEPCGEER bmy_04851T0/1-622 MFRARIVLWL SLTLRSARSF SRARFMEGQP QGPPNPAAME NGTEPCGEER ENSTTRP00000006035/1-659 ---VRGSLWL SLSLRSARSF SRARFMEGQP QGPPNPAAME NGTEPCGEER 51 100 ENSP00000466967/1-659 PREVQETTVT EGAAKIAFPS ANEVFYNPVQ EFNRDLTCAV ITEFARIQLG ENSBTAP00000025736/1-662 PPGFQETTIT EGAARIVFPN ANEVFYNPVQ EFNRDLTCAV ITEFARIQLA BACU003994/1-813 PPEVQETTVT EGAAKIVFPS ANEVFYNPVQ EFNRDLTCAV ITEFARIQLG bmy_04851T0/1-622 PPEVQETTVT EGAAKIVFPS ANEVFYNPVQ EFNRDLTCAV ITEFARIQLG ENSTTRP00000006035/1-659 PPEVQETTVT EGAAKIVFPS ANEVFYNPVQ EVNRDLTXXX XXXXXXXXXX 101 150 ENSP00000466967/1-659 AKGIQIKVPG EKDTQKVVVD LSEQEEEKVE LKESENLASG DQPRTAAVGE ENSBTAP00000025736/1-662 AKGIQIKVPG EKDVQKVVVD LSEPTEDKAE LKEGANLALE DQPRTAAVGE BACU003994/1-813 AKGIQIKVPG EKDVQKVVVD LLEQEEDKAE LKEGANLAPG DQPRTAAVRD bmy_04851T0/1-622 AKGIQIKVPG EKDVQKVVVD LLEQEEDKAE LKEGANLAPG DQPRTAAVRD ENSTTRP00000006035/1-659 XXXXXXKVPG EKDLQKVVVD LSEQEEDKAE VKEGANLAPG DQPRTAAVRD 151 200 ENSP00000466967/1-659 ICEEGLHVLE GLAASGLRSI RFALEVPGLR SVVANDASTR AVDLIRRNVQ ENSBTAP00000025736/1-662 ICEEGLRVLE GLAASGLRSI RFAREVPGLR SVVANDASAR AVDLMRRNVQ BACU003994/1-813 ICEEGLRVLE GLAASGLRSI RFALEVPGLR SVVANDASAR AVELMHRNVQ bmy_04851T0/1-622 ICEEGLRVLE GLAASGLRSI RFALEVPGLR SVVANDASAR AVDLMHRN-- ENSTTRP00000006035/1-659 ICEEGLRVLE GLAASGLRSI RFALEVPGLR SVVANDASAR AVDLMHRNVQ 201 250 ENSP00000466967/1-659 LNDVAHLVQP SQADARMLMY QHQRVSERFD VIDLDPYGSP ATFLDAAVQA ENSBTAP00000025736/1-662 LNEVAHLVQP SQADARMLMY QHQKASERFD VIDLDPYGSP ASFLDAAVQA BACU003994/1-813 LNDVAHLVQP SQADARMLMY QHQKASERFD VIDLDPYGSP APFLDAAVQA bmy_04851T0/1-622 ---------- ---------- -HQKASERFD VIDLDPYGSP APFLDAAVQA ENSTTRP00000006035/1-659 LNDVAHLVQP SQADARMLMY QHQKASERFD VIDLDPYGSP APFLDAAVQA 251 300 ENSP00000466967/1-659 VSEGGLLCVT CTDMAVLAGN SGETCYSKYG AMALKSRACH EMALRIVLHS ENSBTAP00000025736/1-662 VSEGGLLCVT CTDMAVLAGN SGETCYSKYG AMALKSRACH EMALRTVLHS BACU003994/1-813 VSEGGLLCVT CTDMAVLAGN SGETCYSKYG AMALKSRACH EMALRIVLHS bmy_04851T0/1-622 VSEGGLLCVT CTDMAVLAGN SGETCYSKYG AMALKSRACH EM-------- ENSTTRP00000006035/1-659 VSEGGLLCVT CTDMAVLAGN SGETCYSKYG AMALKSRACH EMALRIVLHS 301 350 ENSP00000466967/1-659 LDLRANCYQR FVVPLLSISA DFYVRVFVRV FTGQAKVKAS ASKQALVFQC ENSBTAP00000025736/1-662 LDLRANCYQR FVVPLLSISA DFYVRVFVRV FTGQAKVKAS ASKQALVFQC BACU003994/1-813 LDLHANCYQR FVVPLLSISA DFYVRVFVRV FTGQAKVKAS ASKQALVFQC bmy_04851T0/1-622 ---------R FVVPLLSISA DFYVRVFVRV FTGQAKVKAS ASKQALVFQC ENSTTRP00000006035/1-659 LDLHANCYQR FVVPLLSISA DFYVRIFVRV FTGQAKVKAS ASKQALVFQC 351 400 ENSP00000466967/1-659 VGCGAFHLQR LGKASGVPSG RAKFSAACGP PVTPECEHCG QRHQLGGPMW ENSBTAP00000025736/1-662 VGCGAFHLQR LGKASAASGG RLKFSAACGP PVAPECEHCG QRHQLGGPMW BACU003994/1-813 VGCGAFHLQR LGKASGASGG RVKFSAACGP PVAPECEHCG QRHQLGGPMW bmy_04851T0/1-622 VGCGAFHLQR LGKASGASGG RVKFSAACGP PVAPECEHCG QRHQLGGPMW ENSTTRP00000006035/1-659 VGCGAFHLQR LGKASGASGG RVKFSAACGP PVAPECEHCG QRHQLGGPMW 401 450 ENSP00000466967/1-659 AEPIHDLDFV GRVLEAVSAN PGRFHTSERI RGVLSVITEE LPDVPLYYTL ENSBTAP00000025736/1-662 AEPLHDLEFV GRVLEAVSAN PGRFHTAERI RGVLSVITEE LPDVPLYYTL BACU003994/1-813 AEPLHDLDFV GRVLEAVSAN PGRFHTAERI RGVLSVVAEE LLDVPLYYTL bmy_04851T0/1-622 AEPLHDLDFV GRVLEAVSAN PGRFHTAERI RGVLSVVAEE LLDVPLYYTL ENSTTRP00000006035/1-659 AEPLHDLDFV GRVLEAVSAN PGRFHTAERI RGVLSVVAEE LLDVPLYYTL 451 500 ENSP00000466967/1-659 DQLSSTIHCN TPSLLQLRSA LLHADFRVSL SHACKNAVKT DAPASALWDI ENSBTAP00000025736/1-662 DQLSSTIHCN TPSLLQLRSA LLHAGFRVSL SHACKNAVKT DAPSSTLWDI BACU003994/1-813 DQLSSTIHCS TPRLLQLRSA LLHAGFRVSL SHACKNAVKT DAPSSALWDI bmy_04851T0/1-622 DQLSSTIHCS TPRLLQLRSA LLHAGFRVSL SHACKNAVKT DAPSSALWDI ENSTTRP00000006035/1-659 DQLSSTIRCS TPRLLQLRSA LLHAGFRVSL SHACKNAVKT DAPSSVLWDI 501 550 ENSP00000466967/1-659 MRCWEKECPV KRERLSETSP AFRILSVEPR LQANFTIRED ANPSSRQRGL ENSBTAP00000025736/1-662 MRCWEKECPV KRERLSESSP AFRILSVEPR LQANFTIRDD ANPSSRQRGL BACU003994/1-813 MRCWEKECPV KRERLSETSP AFRILSVEPR LQANFTIRDD ANPSSRQRGL bmy_04851T0/1-622 MRCWEKECPV KRERLSETSP AFRILSVEPR LQANFTIRDD ANPSSRQRGL ENSTTRP00000006035/1-659 MRCWEKECPV KRERLSETSP AFRILSVEPR LQANFTIRDD ANPSSRQRGL 551 600 ENSP00000466967/1-659 KRFQANPEAN WGPRPRARPG GKAADEAMEE RRRLLQNKRK EPPEDVAQRA ENSBTAP00000025736/1-662 KRFQANPEAN WGPRPRARPG GKAAGETVEE RRRLLQNKRK EPVEDPAERA BACU003994/1-813 KRFQANPEAN WGPRPRARPG GKAAGEAMEE RRKLLQNKRK EPDEDLAQRA bmy_04851T0/1-622 KRFQANPEAN WGPRPRARPG GKAAGEAMEE RRKLLQNKRK EPDEDLAQRA ENSTTRP00000006035/1-659 KRFQANPEAN WGPRPRARPR GKAAGEAVEE RRKLLQNKRK EPEEDLAQRA 601 650 ENSP00000466967/1-659 ARLKTFPCKR FKEGTCQRGD QC-------- ---------- -C-------- ENSBTAP00000025736/1-662 AWLKTFPCKR FKEGTCQQGG QC-------- ---------- -C-------- BACU003994/1-813 AQLKTFPCKR FKEVSTPSGS MCPPEAQAEV GPTMTEKAKM VCAPSPVPAP bmy_04851T0/1-622 AQLKTFPCKR FKEGTCQRGD QC-------- ---------- -C-------- ENSTTRP00000006035/1-659 AQLKTFPCKR FKEGTCQRGE QC-------- ---------- -C-------- 651 700 ENSP00000466967/1-659 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025736/1-662 ---------- ---------- ---------- ---------- ---------- BACU003994/1-813 PPKPASPGPP KAEEVGHRGS SPPRLPPGVP VISLGHTRPP GAAMATTELS bmy_04851T0/1-622 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006035/1-659 ---------- ---------- ---------- ---------- ---------- 701 750 ENSP00000466967/1-659 ---------- ---------- --YSHSP--- ---------- -PTPRVSADA ENSBTAP00000025736/1-662 ---------- ---------- --YSHSP--- ---------- -PSPKATAEA BACU003994/1-813 TLRPPLLQLS TLGTAPPPLA LHYHPHPFLN SLYIGPAGPF SIFPSSRLKR bmy_04851T0/1-622 ---------- ---------- --YSHSP--- ---------- -LTPKATAEA ENSTTRP00000006035/1-659 ---------- ---------- --YSHSP--- ---------- -LTPKAAAEA 751 800 ENSP00000466967/1-659 AP-DC----- ---------- ---------- ---------- ---------- ENSBTAP00000025736/1-662 TPTDC----- ---------- ---------- ---------- ---------- BACU003994/1-813 RPSHCELELA EGHQPQKVAR RVFTNSRERW RQQNVNGAFA ELRKLLPTHP bmy_04851T0/1-622 TPTDR----- ---------- ---------- ---------- ---------- ENSTTRP00000006035/1-659 TPTDC----- ---------- ---------- ---------- ---------- 801 850 ENSP00000466967/1-659 ---------- ---------- ----PETSNQ TPPGPG---- ---AAAGPGI ENSBTAP00000025736/1-662 ---------- ---------- ----PEAPSQ NPAEPG---- ---AATGPGT BACU003994/1-813 PDRKLSKNEV LRLAMKYIGF LPAPPGGPDG SPGGAGRPIK TEKAAVSPEV bmy_04851T0/1-622 ---------- ---------- ----PEAPDQ NPLGPG---- ---AAAGPGK ENSTTRP00000006035/1-659 ---------- ---------- ----PEAPDQ NPLGPG---- ---AAAGPGE 851 900 ENSP00000466967/1-659 D ENSBTAP00000025736/1-662 E BACU003994/1-813 R bmy_04851T0/1-622 D ENSTTRP00000006035/1-659 D