KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:27:13 2014 Check: 00 .. Name: ENSP00000245121/1-466 Len: 577 Check: 6191 Weight: 1.00 Name: ENSBTAP00000025744/1-534 Len: 577 Check: 1089 Weight: 1.00 Name: ENSTTRP00000000956/1-464 Len: 577 Check: 3870 Weight: 1.00 Name: bmy_21126T0/1-392 Len: 577 Check: 3826 Weight: 1.00 Name: BACU017650/1-500 Len: 577 Check: 5638 Weight: 1.00 // 1 50 ENSP00000245121/1-466 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025744/1-534 YELKYSFIQF NSQCEMRTEA RRKNLLILIL HYLTQEGYID AANALEQETK ENSTTRP00000000956/1-464 ---------- ---------- ---------- ---------- ---------- bmy_21126T0/1-392 ---------- ----MMPVCL YSFYLELIFS FFCEMARYID AANALEQETK BACU017650/1-500 ---------- ---------- ---------- ----MARYID AANALEQETK 51 100 ENSP00000245121/1-466 ---------- --------ME YESYYFVKFQ KYPKIVKKSS DTAENNLPQR ENSBTAP00000025744/1-534 MGLRRFQVCD NVDLETILME YESYYFVKFQ KYPKIVKKAS DTAENSLPQG ENSTTRP00000000956/1-464 ---------- --------ME YESYYFIKFQ KYPKIVKKAS DTAENNLPQR bmy_21126T0/1-392 LGLRRFEVCD NVDLETILME YESYYFVKFQ KYPKIVKKAS DTAENNLPQR BACU017650/1-500 LGLRRFEVCD NVDLETILME YESYYFVKFQ KYPKIVKKAS DTAENNLPQR 101 150 ENSP00000245121/1-466 SRGKTR---- ---------- ---------- ---------- ---------R ENSBTAP00000025744/1-534 SGGKTR---- ---------- ---------- ---------- ---------R ENSTTRP00000000956/1-464 SGGKTR---- ---------- ---------- ---------- ---------R bmy_21126T0/1-392 SGGKTRRPHP CRRSLFRNAL DGTALGHQGL WIFALTIKPR PQGKVEVGFR BACU017650/1-500 SGGKTR---- ---------- ---------- ---------- ---------R 151 200 ENSP00000245121/1-466 MMNDSCQNLP KINQQRPRSK TTAGKTGDTK SLNKEHPNQE VVDNTRLESA ENSBTAP00000025744/1-534 VMTDSCQNLP KINQQRPRSK TTVGKPGDAR PLHVEHPKQD VVNHTHKENA ENSTTRP00000000956/1-464 VTSDSCQNLP KISQQRPRSK TMVGKPGGAK PLHREHPKEE LVNHTHKESA bmy_21126T0/1-392 AMNDSCQNLP KISQQRPRSK TTVGKPGGSK PLHREHPKQE LVNHTHKESA BACU017650/1-500 AMNDSCQNLP KISQQRPRSK TTVGKPGGSK PLHREHPKQE LVNHTHKESA 201 250 ENSP00000245121/1-466 NFGLHISRIR KDSGEENAHP RRGQIIDFQG LLTDAIKGAT SELALNTFDH ENSBTAP00000025744/1-534 DFGLSISGIN KGSGEENVRP QKGPIIDFRG LLTDAIKGAT SELGLNSFDC ENSTTRP00000000956/1-464 DFGLSISGIN KGSGEENIHP PKGQIIDFRG LLTDAIKGAT SKLGLNSFDC bmy_21126T0/1-392 DFGLSISGIN KGSGEENVHP QKGQIIDFRG LLTDAIKGAT SELGLNSFDC BACU017650/1-500 DFGLSISGIN KGSGEENVHP REGQIIDFRG LLTDAIKGAT SELGLNSFDC 251 300 ENSP00000245121/1-466 NPDPSERLLK PLSAFIGMNS EMRELAAVVS RDIYLHNPNI KWNDIIGLDA ENSBTAP00000025744/1-534 NPDPSERLLK PLSAFIGMNS EMRELAAVVS RDIYLHNPNI KWNDIIGLDA ENSTTRP00000000956/1-464 NPDPS-RLLK SLSAFIGMNS EMREL-AVVR SDIYLHNPNI KWNDIIGLDA bmy_21126T0/1-392 NPDPSERLLK PLSAFIGMNS EMRELAAVVS RDIYLHNPNI KWNDIIGLDA BACU017650/1-500 NPDPSERLLK PLSAFIGMNS EMRELAAVVS RDIYLHNPNI KWNDIIGLDA 301 350 ENSP00000245121/1-466 AKQLVKEAVV YPIRYPQLFT GILSPWKGLL LYGPPGTGKT LLAKAVATEC ENSBTAP00000025744/1-534 AKQLVKEAVV YPIRYPQLFT GILSPWKGLL LYGPPGTGKT LLAKAVATEC ENSTTRP00000000956/1-464 AKQLVKEAVV YPIRYPQLFT GILSPWKGLL LYGPPGTGKT LLAKAVATEC bmy_21126T0/1-392 AKQLVKEAVV YPIRYPQLFT GILSPWKGLL LYGPPGTGKT LLAKAVATEC BACU017650/1-500 AKQLVKEAVV YPTRYPQLFT GILSPWKGLL LYGPPGTGKT LLAKAVATEC 351 400 ENSP00000245121/1-466 KTTFFNISAS TIVSKWRGDS EKLVRVLFEL ARYHAPSTIF LDELESVMSQ ENSBTAP00000025744/1-534 KTTFFNISAS TIVSKWRGDS EKLVRVLFEL ARYHAPSTIF LDELESVMSQ ENSTTRP00000000956/1-464 KTTFFNISAS TIVSKWRGDS EKLVRVLFEL ARYHAPSTIF LDELESVMSQ bmy_21126T0/1-392 KTTFFNISAS TIVSKWRGDS EKLVRVLFEL ARYHAPSTIF LDELESVMSQ BACU017650/1-500 KTTFFNISAS TIVSKWRGDS EKLVRVLFEL ARYHAPSTIF LDELESVMSQ 401 450 ENSP00000245121/1-466 RGTASGGEHE GSLRMKTELL VQMDGLARSE DLVFVLAASN LPWELDCAML ENSBTAP00000025744/1-534 RGTAPGGEHE GSLRMKTELL VQMDGLARSE DLVFVLAASN LPWELDCAML ENSTTRP00000000956/1-464 RGTAPGGEHE GSLRMKTELL VQMDGLARSE DLVFVLAASN LPXXXXXXXX bmy_21126T0/1-392 RGTAPG---- ---------- ---------- ---------- ---------- BACU017650/1-500 RGTAPGGEHE GSLRMKTELL VQMDGLARSE DLVFVLAASN LPWELDYAML 451 500 ENSP00000245121/1-466 RRLEKRILVD LPSREARQAM IYHWLPPVSK SRALELHTEL EYSVLSQETE ENSBTAP00000025744/1-534 RRLEKRILVD LPSQEAREAM IHHWLPAVSR SSALELRADL EYSLLSRETE ENSTTRP00000000956/1-464 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXEME bmy_21126T0/1-392 ---------- ---------- ---------- ---------- ---------- BACU017650/1-500 RRLEKRILVD LPSQEARQAM IHHWLPPVSR GSALELRAEL EYSLLSREME 501 550 ENSP00000245121/1-466 GYSGSDIKLV CREAAMRPVR KIFDALENHQ SESSDLPRIQ LDIVTTADFL ENSBTAP00000025744/1-534 GYSGSDIKLV CREAAMRPVR KIFNALENHQ SGSSNLPGIQ LDTVTTADFL ENSTTRP00000000956/1-464 GYSGSDIKLV CREAAMRPVR KIFNALENQQ SESSSLPGIQ LDTVTTADFL bmy_21126T0/1-392 ---------- ---------- ---------- ---------- ---------- BACU017650/1-500 GYSGSDIKLV CREAAMRPVR KIFNALETQQ SESSSLPGIQ LDTVTTADFL 551 600 ENSP00000245121/1-466 DVLTHTKPSA KNLAQRYSDW QREFESV ENSBTAP00000025744/1-534 DVLAHTKPSA KSLTQRYAAW QSEFESV ENSTTRP00000000956/1-464 DVLAHTKPSA KNLTQRYSAW QSEFESV bmy_21126T0/1-392 ---------- ---------- ------- BACU017650/1-500 DVLAHTKPSA KNLAQRYSAW QSEFESV